Sander lucioperca (pikeperch): 116035889
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Entry
116035889 CDS
T07345
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04217
Necroptosis
sluc04622
RIG-I-like receptor signaling pathway
sluc04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
116035889 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116035889 (cyldb)
04625 C-type lectin receptor signaling pathway
116035889 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sluc01002
]
116035889 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116035889 (cyldb)
Enzymes [BR:
sluc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
116035889 (cyldb)
Peptidases and inhibitors [BR:
sluc01002
]
Cysteine peptidases
Family C67
116035889 (cyldb)
Ubiquitin system [BR:
sluc04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
116035889 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
116035889
NCBI-ProteinID:
XP_031135120
Ensembl:
ENSSLUG00000021321
LinkDB
All DBs
Position
6:40122270..40133478
Genome browser
AA seq
711 aa
AA seq
DB search
MEPKTVLKEKFFIVIRGKTRKGFCRGCIGRVEAELQPGELMGLLYCGGSNAGSPKSGGIV
RREDTYPLTRHQAQLLLFVYPASKRLELLCNPQLFSAICKLSQDDLVVVKHKKGHLPGVV
KNLMQIGRKENKDDLHMLGFEVEFVDSDHNLSSKKPAPLPLFSAADIVQVVPSYSLPLGL
HWKDGQCGGLNRKAVTRINSMPNIGSRARQVSDNDTEQSVIQSQSSSTSHVPLEVGSMVE
VVSNTGITVYGVVQWLGALEGKTGEWAGIELDYEVNGCSNGTYGSQRYFTCKGNRALFIP
VTKCSPDSRFFCSSTGRETSKPTDTSPVPPFEDTDENAPPIPESKALSLLVGRMKGIQGH
INSCYLDATLFSLFSSSVTLENICQKPADSDKPITCTLRKIVNCLRRQGFVPAASVMNFR
KQLGCDTFRTEEKDPEEFITVLFQKVLCMEPLLKLRSRQEICHGAYTFQVFLEKEQMGQM
PTVQQLLDTSCLSGDLKFEEMPSCLMVQMPRFGNKYKMFSHIIPSTELDFTDLLYNSPRE
CFVCGHLAEYECLHCLPDRKLQPGRIKQYCSTCNTQVHTHPSRQGHSPKTLAVPADVASN
TPVPRHMMQLFAVLCIQTSHYVSFVKYGSDPHSWLFFDSMADRCGDDQHGYNIPEIRACP
ELGDFLSQPEEELAWSNPSQAPELVRRLLCDSYMFLYQNPTTPLSKPNDQE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaaaactgtactaaaggagaagtttttcatcgtgatacgcgggaaaacgagg
aaaggcttctgccgaggatgtattggccgtgtggaggcagagttgcagcctggagagctg
atggggctgctgtactgcggtggcagcaatgcagggagccctaagagcggaggcatcgtg
aggagggaggacacataccctctgacccggcaccaggcccagctactgctctttgtttac
cccgcaagcaaacgcctggagctgctgtgtaacccccagctgttctcggctatctgtaag
ctgtctcaggatgatctggtggtggtgaagcacaagaagggacacctgccaggggtggtg
aagaacctgatgcaaattgggaggaaggagaacaaagacgacctgcatatgcttggcttt
gaggtggaatttgtggacagtgatcacaatttatcatccaagaaacctgctcctctgccc
ttgttcagtgcggcagatatcgtccaggtggtcccatcttactcccttcccctcggactg
cactggaaagacggccaatgtgggggtctaaacagaaaagcggtgacgcgcatcaactcc
atgccgaatataggatctcgtgcacgacaagtgagcgacaacgatacagagcagagtgtc
attcagagtcaaagttcaagcacatctcatgtgcctttggaggtgggatccatggtggag
gtggtgtccaacacagggatcacagtatacggggttgtccagtggttgggggcccttgaa
gggaagactggtgaatgggctgggattgaattggactatgaggtgaatggctgctctaat
gggacgtatggaagccagaggtatttcacctgcaaagggaacagggctttgttcattccc
gtcacaaagtgcagtcctgatagcaggttcttctgctcctctacaggaagggagacctcc
aaacccactgacacatctccagttcctccatttgaggacacagatgagaatgcaccacct
attcctgaatcaaaggcattgtctttgttagtgggaagaatgaaagggattcagggtcac
atcaactcctgttaccttgatgccacactcttcagtttgttcagctcatccgtgaccctg
gagaatatctgccaaaagcctgctgactcggacaaacccataacctgcactcttagaaaa
atagtcaactgtttgcgcagacaagggtttgtgcctgctgcgagtgtgatgaatttccgt
aaacagcttggctgcgacaccttccgaacagaggaaaaagacccagaagagttcatcaca
gtcctctttcagaaagtgctttgcatggagccactgcttaagctcagatcgagacaagaa
atatgtcacggtgcctataccttccaggtctttctagaaaaagaacagatgggacagatg
cccactgtccaacagctgctggacacatcctgcctgtcaggagacctcaagtttgaagag
atgccgtcctgtctaatggttcagatgccaaggtttggaaacaagtataagatgttttct
cacatcattccctccactgagctggacttcacagatcttctatacaattctccaagggaa
tgctttgtttgtgggcatttggcagagtacgagtgtcttcattgtctaccagatcgcaaa
ttgcaaccagggagaataaaacagtactgctctacctgcaacacacaggttcacacacat
ccgtcgcggcagggtcactcccccaaaactctagcagtaccagcagatgtagcctctaat
actcctgtgcccaggcacatgatgcagctgtttgctgtgctctgcattcaaacaagccac
tatgtgtcctttgtcaaatacggctctgatccccactcctggctcttttttgacagcatg
gcagacagatgcggtgatgatcaacatggctacaacattcctgagatccgagcttgtccg
gagctaggtgacttcctgtcccagccggaggaggagctggcttggtctaacccctcccag
gctcctgaacttgtgcgcaggttgctgtgtgactcctatatgtttttataccaaaaccca
accacgccactttcaaaacccaacgatcaggaatag
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