Sander lucioperca (pikeperch): 116036041
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Entry
116036041 CDS
T07345
Symbol
smg5
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116036041 (smg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116036041 (smg5)
03032 DNA replication proteins [BR:
sluc03032
]
116036041 (smg5)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
116036041 (smg5)
mRNA cycle factors
Common to processing body (P body) and stress granule
116036041 (smg5)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
116036041 (smg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
Motif
Other DBs
NCBI-GeneID:
116036041
NCBI-ProteinID:
XP_031135327
Ensembl:
ENSSLUG00000011694
UniProt:
A0A8C9YGP5
LinkDB
All DBs
Position
10:13821791..13843317
Genome browser
AA seq
1123 aa
AA seq
DB search
MSGPVQDSEPEAKVLLIKRLYRAVVESVHKLDVIIASKASYREVFKPENISLRNKLRELC
VKLMFLHPVDYGRKAEELLWRKVYYEVIQVIKTNKKHIHSRSALECAYRTHLIAGVGFYQ
HLLLYIQSHYQLELQDCIDWTHVTDPLIGRKKPVSATPKEMEWAQMACHRCLVYLGDLAR
YQNELAGVEAEQLAERFYHQALSVMPHMGMPFNQLGTLAGSKFYNVEATYYYLRCIQSEA
PFEGAYGNLKRLFDKAAKMYHQVKKQEMKKLSPSRQRSKDIKRLLVSFMYLQSLLQPKNS
LMETELTSLCQSVLEDFNLVLFYLPTAPHGGAHHSPGEEEEEQQHADSSCPVLPDTLVFK
MVVTCLMVVHSLKRGGSKQYSASIAFTLALFSHLVNHVNIRLQAELEEAESQVPPLHTDT
TDDLEMRDLSAPLTDRSDDKPLQNGSLEQQDEEEKKDEDGCERDGAKKHCSVEEQRKLEE
EKQRQKKKYTRLSRLRRRRCARKDTRGEDESDLSEGFESEEDEDDDDERRGRADSTGATT
TGTPPNPESIRKEPKRVPLGEGGSWGNSSEEEEEEGGTAFDVETDSDMNSQESRSDLEDI
EDTENSDNLEGQAREHQDEEEDEDQPKEEGGIRDGDTPPTTNGPLMPSDASISSNLQAMS
SQLFQSKRCFRLAPTFSNMLLRPQGSSSPGIPTPTDASAPPSQETPPPSGDSPCDMNPGT
ANGTNENDLDSDSEGSQHSTPSVHSEKTLLEKMEILTNQGLIQVVKVFVDWLRTNTDIIL
MCAQSSQSLWNRLSVLLNLLPDGSKILEAELGLNAEVTELLNECEQPGLVQSLLLPEDLA
LRHLPALNVAHRRLDFTRRNPSLSSLQECVVRVCCIRSFGHFLTNLQGNVLHYNPEAGIF
TSISQSVQDNLVQQAKAQFRMAEEEARRNRLMRDMAQLRLQLEVSQLEGSLQQPKAQSSM
SPYLVPDTAALCQHLNLIRQLASSGCFIIIIPRTVIDGLDRLKKENAGARDGIRFLESEF
RKGNRYIRCQKESGRSFERDKLKRQDIEAWHFYKMVDSCRQLTVSQSNGDEDTAGMVTIL
TGHQVEELCTRSAPMKAAIQAAGSAGMELKNIVAFYRQWKEIG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaccggtgcaggacagtgagccagaggcgaaagtccttctcatcaagcggctt
tacagggctgtggtggaatctgtgcacaagctggatgtcatcatcgccagcaaagcatcc
tacagagaggtcttcaagccggagaacatcagccttcgcaacaagctgagggagctttgt
gtgaagctaatgtttcttcaccctgttgactacggccgtaaggcagaggagctgctctgg
aggaaggtttactatgaggtcatccaggttatcaagaccaacaagaagcacatccacagt
cgcagcgctctggagtgtgcctaccgtacacacctgattgccggcgtgggtttctaccag
cacctgctgctatacatccagtcacattaccagctggagctgcaggactgcatcgactgg
acccacgtcacagacccactgataggccgaaagaaaccagtgtcagccacccccaaggag
atggagtgggcacagatggcctgtcatcgctgtctggtctaccttggagatctagcccgt
tatcagaatgaacttgctggtgtggaggctgagcagctggcagaaaggttttaccatcag
gcgctgtccgtcatgccacacatgggaatgccttttaaccaactgggcacactggcagga
agcaagttctacaatgttgaagcaacctactactacctacgctgcatccaatcagaggcc
ccctttgagggtgcctatggcaacctgaagcgcctgtttgacaaagctgccaagatgtac
caccaagtgaagaagcaggaaatgaagaagctgtctccatctcgacaaagatcaaaagac
attaagcgcctcctggtgagcttcatgtaccttcagagcctgctgcagcccaagaacagt
ctaatggagacagagctgacgtcactctgccagtcggtgctggaggacttcaacctggtg
ttgttttacctgccgacagcgccccatggcggtgctcaccactcccccggcgaggaggag
gaggagcagcagcacgctgacagctcctgccctgtgctgccggacaccctcgtcttcaag
atggtggtcacttgtctgatggtggtgcacagcctgaagaggggaggatcaaagcagtac
agtgcgtccatagctttcactctggcgctgttctcccatctggtgaaccacgtcaacatt
cggctgcaggctgaactggaggaagcggagagccaggtgccgccacttcacactgacacc
acagatgacctggagatgagggatttgtccgctccattgacagatcgctctgatgacaag
cctctgcagaatggctccctggagcaacaagatgaggaggagaagaaggatgaagatggc
tgtgaaagggatggtgccaaaaagcattgcagtgtggaagaacagcgcaagttggaagaa
gagaaacagagacagaagaagaagtacacccgcctctctagactccgccgacgccgctgt
gcccgcaaggacactcgaggagaggatgaaagtgacttgagcgaaggctttgagagtgaa
gaggatgaagatgacgatgacgagaggaggggtcgcgccgactccacaggtgccaccacg
acaggaaccccgcccaatcctgaatccatcaggaaggagcctaagagagtacccctgggt
gaggggggcagctgggggaatagctcagaggaagaggaggaggaaggagggacggcgttt
gatgtagagaccgactcggacatgaacagccaggagtctcgctcagatctggaagacata
gaggacacggaaaactccgacaacttggagggtcaggcgcgggagcaccaggacgaagaa
gaagatgaagaccaacccaaggaagaaggaggcatccgagacggtgacacacccccgacc
accaacgggcctctcatgcccagcgacgccagcatcagcagcaacctccaggccatgtcc
tcacaactcttccagtcaaagcgctgcttccgcctggcgccaaccttcagcaacatgttg
ttgaggcctcaaggctcatcctcccctggtattcccacccctactgacgcctctgctccc
ccctcccaagagacaccccctccctctggggactcaccctgcgatatgaaccctggtact
gccaacggaaccaatgaaaatgacttggactcggattcggaaggcagccaacacagtacc
ccatcagtacatagtgagaaaaccctcttagagaagatggagatcctgaccaatcaaggg
ttgattcaggtggtgaaggtctttgttgattggctaagaacaaacaccgacattatcctt
atgtgtgcacagagttctcaaagcctgtggaaccgactgtctgtgctgctcaacctgcta
ccagatggcagcaagattcttgaggctgagctcggcctgaacgcagaggtgacagagctg
ttaaatgagtgtgagcagcccggtttggtccagagtctgctgctgcctgaggatttggct
ctgcgacacctgcctgctctcaacgtagctcaccgccgtcttgattttacacgccgcaac
ccctctctcagctccctacaggagtgtgtagtgcgagtgtgttgcattcgcagttttggc
catttcctgacgaatctccagggcaacgtgctgcactacaacccagaggcgggcatattc
accagcatcagccaatccgtacaggataatctggtgcagcaggccaaggcccagttccga
atggctgaagaggaggctcgtcgaaatcgcttaatgagggatatggcccagcttcgacta
cagttggaggtatcgcagctagagggcagccttcagcagcctaaggcccagtcgtccatg
tctccctacctggtgcctgacacagctgctctctgccagcatctgaacctcatccggcag
ctggccagcagcggctgcttcatcatcatcatcccacggacagtgattgatggacttgac
aggttgaagaaggaaaatgccggtgcgagggatggcatccgcttcctggagtctgaattt
cgcaaaggcaacaggtacatacgctgccagaaggagtctggtcgcagttttgaaagagat
aaactgaaacgtcaggacatcgaagcctggcatttttacaagatggtggacagctgtcgt
cagctaactgtctcccagagcaacggagatgaagatacagccggtatggtgaccattctc
actggccatcaagtggaggagctttgcactcggtcagcaccaatgaaggcggcgatccag
gcggcgggatcagcgggcatggagctgaagaacatcgtggcgttctaccggcagtggaag
gagattggctga
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integrated database retrieval system
