Sander lucioperca (pikeperch): 116036080
Help
Entry
116036080 CDS
T07345
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116036080 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116036080 (nr1d2a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116036080 (nr1d2a)
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1D. Rev-Erb
116036080 (nr1d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
116036080
NCBI-ProteinID:
XP_031135382
Ensembl:
ENSSLUG00000011202
LinkDB
All DBs
Position
10:complement(12712873..12720370)
Genome browser
AA seq
597 aa
AA seq
DB search
MSEDIRTAKPGGVIAYISSGSASSPESCLNRGYLSTSQTVPRPSLPSRAVGMVVDISPPA
KNGHQRSGHGMEKAGRSSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFR
RSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKREKQRML
LEMQNAMNNMMSNNSQLHSMLHGHPSPALSMEAMTSDASSSASSSSSSSSSTSESPTCSN
PSSPQCPQDSESVVSMDTNSSSASSCASDSGEDEAVVTMSRQHRDAFAFSQQRSQASPLS
GPVTLETRCDGRMEDQQENWSCWNNNVVVGGHQQSSHSNSQHVADTAYREERAVNQQQLS
STPSCGLPEDSQRQHLFHTQPASRGYNGPTSCVNNRAHLVCPMNTSPFVDPNKPSQEIWE
EFSMSFTPAVRDVVDFAKGIPGFCDLPEHDQVSLLKAGTFEVLMVRFASLFNVVERTVTF
LSGKRYSLDMLRSLGAGELLNSMCEFSEKLAVLGLNSDEMSFFTAVVLVSADRSGIQDLD
SVEALQDKLIRGLRNLVMQNHGEESATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaggacatccggacagccaagcctggaggagtcattgcctatatttcctccggc
tctgcctccagcccagagtcctgcctgaacaggggctacctgtcgacatcacagacagtg
ccccgcccctcgctgcccagcagggctgtgggcatggtggtggatatctctccgccggcc
aagaatggccaccagcgcagcggccacggcatggaaaaggctgggcgctcctccacatct
gccaagagcagcataaccaaaatcaatggcatggtgctgttgtgcaaggtgtgtggtgat
gtggcctcgggcttccactatggcgtccatgcctgtgagggctgcaagggattcttcagg
agaagcatccagcagaacatccaatacaagaagtgtctaaagatggagaactgcaccatc
atgaggatcaacaggaaccgctgccagcagtgtcggttcaagaagtgtctggctgtcggc
atgtccagagatgctgtccgatttggccgcattccaaagagggaaaagcaaaggatgctg
ctggagatgcagaacgcgatgaacaacatgatgagcaacaacagccagctgcacagcatg
ctgcacggccacccgagcccagcactttccatggaggccatgaccagcgacgccagctct
tcagcctcctcttcctcctcctcctcctcctctacttccgagtccccgacgtgctccaac
ccttcctccccgcagtgcccccaggactccgagtccgtggtttctatggacaccaactcc
agctctgcgtcctcctgcgcgtcagacagcggcgaggacgaggccgtcgtcacaatgagc
aggcagcaccgggacgcctttgccttcagccaacagaggtcccaggcctcgcccttgtcc
ggccccgtcaccctggagacgaggtgcgacggccgcatggaggatcaacaggagaactgg
agctgctggaacaacaatgtggttgtgggaggtcaccagcagagttcacacagtaacagt
caacacgtcgccgacactgcttacagggaggagagggcagtgaaccagcagcagctcagc
agcacccctagctgtggactaccagaagacagccaaagacagcacttatttcacacacaa
cctgcctcaagaggttataatgggccaaccagctgtgtgaacaatagagcacacttggtc
tgtccgatgaacacgtcacccttcgtggaccccaacaagccgagccaagagatctgggag
gagttctccatgagcttcacccccgccgtgcgggacgtggtcgacttcgccaaggggatc
ccgggcttctgcgacctccccgagcacgaccaagtcagcctgctgaaagctggaactttt
gaggtgctgatggtccgattcgcctctctgttcaacgtggtcgagcggacggtgaccttc
ctgagcggcaagcgctacagcctcgacatgctacggtcgctgggcgccggcgagctgctc
aactccatgtgcgagttcagcgagaagctggcggtgctggggctcaactcagacgaaatg
agcttcttcacagccgtggtgctcgtctcagccgatcgctcagggatccaggacctggac
tcagttgaggccctgcaggacaaactgatccgggggctgcgaaacctggtgatgcagaac
cacggtgaggagtcagccaccaccttcaccaagctgctgctcaagcttcccgagctgcgt
tcactcaacaacatgcactcagaggaactgctctccttcaaagtgcacccttga
DBGET
integrated database retrieval system
