KEGG   Sander lucioperca (pikeperch): 116036104
Entry
116036104         CDS       T07345                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03013  Nucleocytoplasmic transport
sluc03015  mRNA surveillance pathway
sluc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116036104 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    116036104 (rbm8a)
   03015 mRNA surveillance pathway
    116036104 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116036104 (rbm8a)
   03041 Spliceosome [BR:sluc03041]
    116036104 (rbm8a)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     116036104 (rbm8a)
Spliceosome [BR:sluc03041]
 Complex C
  Other components
   EJC/TREX
    116036104 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 RRM_7
Other DBs
NCBI-GeneID: 116036104
NCBI-ProteinID: XP_031135423
Ensembl: ENSSLUG00000011741
UniProt: A0A8C9YGV8
LinkDB
Position
10:13952931..13957676
AA seq 175 aa
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRIKEDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNAQDMMGQPISVDWGFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggacgtgttggatcttcatgaagcgggaggcgaggactttcctatggatgaggat
ggtgatgagagcatccacaagttgaaggagaaagctaagaagaggaaaggacgaggcttt
ggttcagaggaaggagccaggtccagaatcaaagaggactatgatactgtggagcaagat
ggggacgagccaggccctcagagatctgtggagggctggatcctgtttgtgacaggtgta
catgaagaggccacggaggaagacatccatgacaagttttcagagtttggagaaatcaag
aacctgcatctcaaccttgaccgcagaacaggctacctcaagggatatgcactggtggag
tatgagacatacaaagaggcccaggcagccatggaagggctcaacgctcaggacatgatg
ggccagcctatcagtgttgactggggatttgtcagagggccccccaagaacaagaggagg
actggcggccggagacgcagcagaagtccagataggaggcggcgttga

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