Sander lucioperca (pikeperch): 116036227 Help Entry 116036227         CDS       T07345                                  Symbol spg11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism sluc  Sander lucioperca (pikeperch) Pathway sluc04142   Lysosome Brite KEGG Orthology (KO) [BR:sluc00001]  09140 Cellular Processes   09141 Transport and catabolism    04142 Lysosome     116036227 (spg11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:sluc03400]     116036227 (spg11) DNA repair and recombination proteins [BR:sluc03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      116036227 (spg11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  116036227 NCBI-ProteinID:  XP_035859498 Ensembl:  ENSSLUG00000012159 LinkDB All DBs Position 7:complement(36102250..36163159) Genome browser AA seq 2392 aa AA seqDB search MLESSSIEVSVIPENQHCGEVAGIQKAELAPGGSLLGCLGLRGRLVVWNPADRDAPPAAV DGCYADFCWEEAAVNGGGFRLLAVGSQWDLKLLEVEAERSASISALCVSECPADRLLQTA RQQDDGVCELDSVRVLSFAAGRACVLLNRDWLLQLRWQQAEAEPQMLSCCSIELTDGNRH TAVHHCVCRETLFILDSTGLISVYNICDGRLLANVDLPAYLTPVQAEDNIVSSSSSSSLS SSPSFCLLQVSADLSTAVAVARPHTAVAVDLDHYFSLHPDHLLCAAPPSRPPLRPQHPTD QDSVLSSNCSVAALGSTFSTDRSWEARLAFMYRGVQQAAPPASSSSSSSSSWSSSLPHLE SHQAPSTAHSRVPRGGATVAFSVPEASAPSLLTVSEFSAQLTFVSPGNRQTTVALWDLES GRVSHHQAEGEAAPVQRCGERQHRLLLKKAGVFQVLFSVSQQDLLSRLMLFGSAATVDAV CHLNSWGRCSIPIHALQAGLKNRQLDTVDFYLKSKENILSPAADQPAASTLSLADSFQEL CPALDLLCSAVRESNSEAQSRQFSEQLLNITLSFVNTQIRSVLSKKNCEDAGVRSCVDVL DRYVTELRSYMKRFPWPAGGDTSRTHPADGAAEEAQRDEWEQLPTEEVVRQSVLTNQIAR AQAALRRRGRPEQRLSALRMEGLRQVFSCLQRRDLHTADALLVNMGFSVKKQLHSICLYT DDRDLREFVVEEMSGRGYFPEEEMQSVAFIREMERLGSLPASRCAANTKSHSRVQMVHRE AGGVGEAVLGALAGQRTSQGDEGLWRNVRLDWVRNWDQSCQTAVLLSRLQHTEVTSCDSA LLWRYLTALHDQQRVVDWIQSGEASGGSRWPELTPELVNSNTVCSSYMREQILDLLARRG VFVPEELSDLEQLLWRLAQGGGVMSRSPPVPQYRSPLGLDLHSLFISFCLEHGLQYLLYT YLEHYRLTPRNCPLLTNQSVSESRPWFEMLVKIQEITRDLSDPGLVFQASLTSAQVLLPG SQASLSSLLLEGHSLLALAAIMFAPGGIDQVVVQGQRSGQSERTVDPQLLKLALAPHAKL RAALFPAGPRGHSPSSDISVYHLLQSLHPLDPSRLFGWQAANTLNSTETSELPHFSSPHL VNRFALVENLDFLYYLRHGRPSFAYATFLVQQLSGCSDVPLLLQRAWQQVYRLALQWFNV ASVASAAVCFSELLGVCSLKLRVDIRAMNAILQHRNQQHTHTPPTQHLHTLVSKGVKLAE AEPGAAEELIGYLEAAVTDSVEQKGFSRSSYEAAQEWALPVQFCQLHSLPLSSIYPAHCA EDGQFIHFLLFVQLHNFPPQQVRSLAAQFGPALQAHLSLAFQDLQVYSQRSLLRGSGKQS VFPSAGEEHPRELFQVLLQSQEEAAPVRFLLQEALLQRCPTLAVMAACHQGAELLACLCV WVLTSVDDVTAREATSHLVQAPQHHEWSLHDLSIIWRTLLGRGHVRPLLRGFQLFQRDCP LVLVLQMFEMCCDYRNFSEAKAKLLDFQRTLIALRNGGQAAPDGGPPLQWVESQASVLLL TMLQRCSSQYDLHRLLQLLADVDKLLKSNGPDFRKLSQLSQLLQGSEVGVSRRLLQCVSS SVQQEEFQAAVDALQATGRYAQARQVALLAGLPVHRLLLSQLLQEVNSQKSKRQWRRLET RVGLWRKCHEQLKAESTDPESASQFFLSAAETESAPDAPSERLDVTERCLLLCLAAHWLS LLRPAPRDTLESLEKALWVNRVRRHVLAAAMEKESVFNVPPAAVEPETNTYEALMQEFSF SNISCLNTETCLSLDGLPARGEPDADSPLSPEERGVLYELIGQLLDEGSIHEASRVCRYF SLYQPDMWVVLRCRGLAAGELDPETQDEALDAPPKAKLTSSPSLSSLSSFVMLPLPEDEV ATQLQKLVDQCRHGNNYCKQVLSLYQLAKELQCSFREICDEPPGAVLEKLLLSEQPEHFR KARAFIRAQGLCADAVARLVSSAVVQALLASTQELQPERQVFRPSEGRDSLVQLIKLCDD PNLVGVRLLENLDTVPLRDLNCIVELLIVAHDCFSLTCNMEGIVRVLQATRHLSHTYLAP GEHYGLLVRLLTGIGRYNEMTYVFDLLHQNHRFEMLLRKKMNTDRGQSSSLKTALLDYIK RCLPADSEKHNMVALCFSMRREIGENHEMAARTQLKIIESQAWGELVVTPDLKSSLVKVL GLLRDAAESFSKDSCVRQASRCVRTAKLVALQLHFLNRGSELRVINLRPAELLNAVTALP RCYQVFVVSEAYSYSPDWAEILYQKVILNGDFVYLEELKRHRPLTSSLFEDIFKMLDGAP SGVSPNVKRLLTHCDDVYSRYRLAYQQNLYDVTKTLLQDAKTSSYLNDRLAS NT seq 7179 nt NT seq  +upstreamnt  +downstreamnt atgttagagagtagctccatagaggtgtctgtgattccggagaaccagcactgtggagag gtagcgggcatccagaaagctgagctggctcccggaggctcgctgctcggatgtctgggg ctccgcggccgcctggtggtctggaacccggcggacagagacgctcccccggccgcagtg gacggctgctacgctgatttttgctgggaggaggcggctgtgaacggtggcggcttcaga ctgctggctgttggatctcagtgggacctgaagctgctggaggtggaggcagagcgctcg gcctccatttctgcgctctgcgtctccgaatgtcccgcggatcgcctgctgcagaccgcc aggcagcaggatgacggtgtgtgtgagctggactcggtgcgcgtgttgtcgtttgctgcc ggccgcgcctgcgtgctgctgaaccgtgattggctgctgcagctgcggtggcagcaggcg gaggcggagccccagatgttgtcctgctgcagcatcgagctgactgacggcaacagacac acggccgtccaccactgcgtctgcagggagaccctgttcatcctcgactccactggactc atctctgtgtataacatctgtgacggccgtctgctggccaacgtcgacctcccggcgtac ctgactcctgtccaggcggaggacaacattgtctcctcctcttcctcctcctccctctcc tcctctccctccttctgcctcctccaggtgtcagctgatctcagcacagccgtggccgtc gctcggcctcacaccgccgtggccgtcgacctcgaccactacttcagtttgcacccggac cacctgctgtgtgccgcccccccctcccgcccccctctgcggccccagcacccgacagac caggacagtgtgctgagctccaactgcagcgtggccgccctcgggtccaccttcagcact gaccgctcgtgggaagctcgtctggccttcatgtaccgcggagtccagcaggctgctcct cccgcttcctcctcctcctcctcctcctcctcctggtcctcctccctcccccatctggag tcccaccaggccccgtccacggcccacagcagagtgccgcgcggcggggccaccgttgcc ttctccgtccccgaggcgtccgctccgtctctgctcaccgtgtccgagttctccgcccag ctcaccttcgtctcccccggcaacaggcagaccacagtggccctatgggatttggagtct ggcagagtgagccaccaccaggcggagggcgaggcggctccggttcagcgctgcggagag agacagcacagactgctgctcaagaaggctggtgtgttccaggtcttgttctcagtttcc cagcaggacttgctcagcaggttgatgctgtttggcagcgcagcgacagtagacgcagtc tgtcacctgaacagctgggggcgctgctccatccccatccacgccctgcaggctggactt aagaaccgtcagctggacacggtggatttctacctgaagagtaaagaaaacatcctgagc cctgctgccgatcagccggccgcctccacactgagcctggccgacagtttccaggagttg tgtcctgctctagacctgctgtgttcggctgtcagagagtcaaacagtgaagctcagagc cgacagttctcagaacagctgctcaacatcacactgagcttcgtcaacacacagatccgc tcagtcctgtccaagaaaaactgcgaagacgccggcgtgcggagctgcgtggacgttttg gaccgctacgtcaccgagctgcggagctacatgaagagattcccctggcctgcagggggc gacacctccaggacccatcctgctgatggtgctgcggaggaggctcagagagacgagtgg gagcagctgcccacggaggaagtggtgcgtcagtccgtcctgaccaatcagatcgcccga gcccaggccgccctgcggcggcgggggcgcccggagcagcgcctgtcggctctgaggatg gagggtctgcgtcaggtgttctcctgcctgcagcgccgagacctgcacaccgccgacgcc ctgctcgtcaacatgggtttcagtgtgaagaagcagctccacagtatttgcctctacact gacgacagggacctccgggagtttgtggtggaggagatgtcggggcgggggtattttccc gaagaggagatgcagagcgtggcgttcatcagggagatggagaggttggggtctctgcct gcatcccgctgcgccgcaaacaccaaatcacacagcagggtccagatggtgcacagggag gcagggggtgtgggtgaggcggttctgggggctctggcaggacagaggacgtcccagggg gacgagggactctggaggaacgtcagactggactgggtgaggaactgggaccagagctgc cagaccgccgtcctgctgtccagactccaacacacagaggtgacttcctgtgactcggcg ttgctatggcgatacctgacggcgctccacgaccagcagcgcgtggtggactggatccag agcggggaggcgtccggcggctcccggtggcccgagttaacccccgagctggtcaacagc aacacggtctgcagcagctacatgagggagcagatcctggacctgctggccaggagaggt gtgttcgtccccgaggagctgtccgacctggagcagctgctgtggaggctggctcagggc ggaggggtgatgtctcggtcccctcccgtcccccagtaccgctcccccctcggcctggac ctccacagcctcttcatctccttctgcctggagcacggcctgcagtacctgctctacacc tacctggagcactacaggttgacacccagaaactgtcccctgttgaccaatcagagcgtg tcagagagccggccgtggtttgagatgctggtgaagatccaggagatcaccagagacctg tcagatccaggactggtgttccaggccagtctaaccagtgcccaggtgctgttgccgggc agccaggcgtccctcagcagtctgctgttagagggacacagtctgctggccctggctgcc atcatgttcgcccccggaggaatcgaccaggtggtggttcagggccaacgctcgggccaa tcagagaggaccgtcgacccccagctcctgaagttggcgctggccccgcacgccaaactg agggccgccctgttccccgccgggccccgaggacacagcccgtcctccgacatctccgtc tatcacctcctgcagtcgctccaccctctggacccatcccggctgttcggctggcaggcg gcaaacaccctcaactccaccgaaacgtcggagctgcctcatttctccagccctcacctg gtcaaccggttcgctctggtggagaacctggactttctgtactacctccgtcacggccga ccgtcctttgcttacgccaccttcctcgtccagcagctgagcggctgcagcgacgtcccg ctactgctgcagcgggcctggcagcaggtgtaccggttggccctgcagtggtttaacgtg gcgtctgtggcgtcagcggccgtttgtttctccgagctgctcggcgtctgcagcctcaag ctgagggtcgacatcagagccatgaacgccatcctgcagcaccggaaccagcagcacaca cacacgcctccaacacagcatctacacactctggtgtctaaaggtgtaaagctggcagag gcggagcctggagcagcggaggagctgattggctacctggaagcggccgtgacagacagc gtggagcagaagggcttcagcaggtcgtcctacgaggcggcccaggagtgggcgttgccc gttcagttctgtcagctccacagtttgccgctcagctcgatttaccccgcccactgcgcc gaggacggacagttcatccatttcctgttgttcgtccagctgcacaactttccgccacag caggtgaggtccctggccgctcagtttggccccgccctgcaggcccacctgagtctggcg tttcaggacctgcaggtgtacagtcagaggagtttgctccgtggctccgggaagcagtca gtcttcccgagcgcaggcgaggagcaccccagggagctgttccaggtcctcctgcagagc caggaggaggcggcgcccgtcaggttcctgctgcaggaggcgctgctgcagcgctgccca actctggcagtaatggctgcctgtcatcagggggcagagttgctggcgtgcctctgcgtg tgggtgctgacctccgtggatgatgtcacagcgagggaagccacgtcccacctggttcaa gccccgcagcaccacgagtggagcctgcatgacctgtcgatcatctggaggacgctgctg gggcggggccacgtcaggcccctcctccgaggcttccagctcttccaaagggactgtccc ctggtgttggtgctgcagatgttcgagatgtgttgtgactacaggaacttctccgaggct aaagccaagctgttggacttccagaggacgctcatcgctctgaggaacggcgggcaggcg gcccctgatggcggcccccccctgcagtgggtggagagccaggcctcggtgctgctgctc accatgctgcagcgctgctcctcccagtacgacctgcaccggctgctgcagctgctggcc gacgtcgacaagctcctcaagtccaacggtcctgacttcaggaagctgagtcagctgagt cagctgctgcaggggtcagaggtgggcgtgtctcggcggctgctgcagtgcgtttcctcc tcggtccagcaggaggagtttcaggctgcagtggacgctctgcaggccacggggcgctac gctcaggcccggcaggtggccctgctggccggcctgcccgtccaccgcctgctgctcagc cagcttctccaggaggtaaactcccagaagtccaagcggcagtggaggaggctggagacg cgagtcggtctgtggaggaaatgtcacgagcagctgaaagctgagagcactgatccagag tcggcctcgcagttcttcctgtcggcggctgaaacggagagcgctcccgacgcaccgagc gagcggctggacgtcacggagcgctgcctgctgctctgcctcgccgcgcactggctctcg ctgctccgcccggctccccgggacacgctggagagcctggagaaggcgctgtgggtcaac cgagtgcgacggcacgtcctcgccgccgcaatggagaaagagagcgtcttcaacgtgccg ccggccgccgtcgaaccggaaacaaacacgtacgaagcgctcatgcaggagttctccttc tccaacatctcctgcctgaacacggagacgtgtctgagtctggacgggctcccggcgcgg ggcgagccggacgccgactcgccgctgagtccggaggagaggggcgtgctctatgagctg attggtcagctgttagacgaagggagcatccacgaagccagccgggtgtgccggtatttc tccctgtaccagcccgacatgtgggtggtgctgcgctgccgaggcctcgccgccggagaa ctcgaccccgaaacacaagacgaggcgctggacgctccgccgaaggccaaacttaccagc tctccctcgctcagcagcctgtcgtccttcgtgatgctccccctccctgaagacgaggtc gccacgcagctccagaaactggtggatcagtgtcgccacggcaacaactactgcaaacaa gtgctcagcctctaccagctcgccaaggagttgcagtgttcgttccgagagatctgcgac gagccgcccggcgctgtgctggagaagctgctgctgtcggagcagccggagcatttcagg aaggctcgggccttcatccgagcccagggtctgtgtgcggacgccgtggcccggctggtg tcctccgccgtggtgcaggcgctgctcgcctccacccaggagctgcagcccgagcgtcag gtgttcaggccgtcggagggccgcgactcgctggtccagctcatcaaactgtgtgacgac cccaatctggtgggagtcagactgctggagaacctggacacggtcccactgagggacctg aactgcattgtagagctgctgatcgtggctcacgactgcttcagcctcacctgtaacatg gaggggatcgtcagagtgctgcaggccaccaggcacctcagccacacctacctcgccccg ggagagcactacggcctgctggtgcgcctactgaccggtataggcaggtataacgagatg acgtacgtctttgacctgctgcatcagaaccatcgctttgagatgctgctgaggaagaag atgaacacagacagaggacagagctccagcctgaagacggctctgctggattacatcaag cgctgcctccccgccgacagcgagaaacacaacatggtggcgctgtgcttcagcatgcgg agggagatcggagagaaccacgagatggccgccaggacacagctgaagatcatcgagtct caggcctggggtgagctagtcgtcactccggatctcaagagttcgttggtcaaagtgttg gggctgctgagggacgctgccgagagcttctcaaaggactcgtgtgtgcgtcaggcgagt cgctgtgttcggactgcgaagctggtggctcttcagctgcacttcctgaaccggggatca gagctgcgcgtcatcaacctgcgaccggcagagctgctgaacgctgtcacggcgctgcca cgatgctaccaggtgtttgtggtgtcggaggcgtacagctacagtccggactgggccgag attctgtaccagaaggtgatcctgaacggagactttgtctacctggaggagctcaaacgc caccgcccgctcacctccagcctgtttgaggacattttcaaaatgctggacggcgctccc agcggcgtctctcccaacgtgaagcggctgctgactcactgcgatgacgtgtacagccgc taccggctggcctaccagcagaatctctacgacgtcaccaagacgctgctgcaggacgcc aagacgtccagctacctgaacgacaggctggccagctga

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