Sander lucioperca (pikeperch): 116036323
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Entry
116036323 CDS
T07345
Symbol
lsp1a
Name
(RefSeq) non-muscle caldesmon isoform X1
KO
K12327
caldesmon
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
116036323 (lsp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116036323 (lsp1a)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116036323 (lsp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
116036323
NCBI-ProteinID:
XP_031135699
Ensembl:
ENSSLUG00000010049
UniProt:
A0A8C9Y7M9
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Position
7:complement(35081037..35139944)
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AA seq
569 aa
AA seq
DB search
MSNAVLRRNSTKQGLQNLIRLTAQRSVEDAEEVEREQRRRAREASRWTNGGSLPAQSSLE
NETPADETMYDGDLKPSGSPSLEEDEGFSDWTQRRERRRQQRLQELGHGGEEDEDEEENA
INKAVPVKSVQASVASSSRLQRQQHEDEDDGAAVAMGRRKEREEEEVARGRRETQREEEE
DKRKRQEVMTRKREEIQRPNTEMEKRKDVKISYTSKVFLHQESKLGIANGDATKEEVTSY
KSKTTKRPTSRAAEPEESQAILETERRLEKIRLGLQQKESQELEQLRHRQAEAEQELEQL
KKRREERRRVREEEERRREEEEHQRLAREEEERRRMKEDIEKRRTEAAERMKSLSTLSVD
GDEAFCPFSPKAPTHKITERTQSLNRSLKKSNSFKKTQTLVLLPKIDDKLEQYAHAVENS
QEARAVKATLTDLPSSPEVVASKKTLFEAGEAWSQAPAKPAACKDAEGLKVVVAERITQW
VKGPSDGSRPSLCKPTDVRPGDVMQKKNMWEVIGDSIGQPGTQRVKGSAAGKKYKFVVTG
HGKYEKIPVDDENGGEFINGESDLYHDRY
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgctgtgctgagaagaaactccaccaaacagggtttacagaacctgataagg
ctgacggctcagaggagcgtggaggacgcggaggaggtggagagggagcagcgtcggaga
gctcgggaggcgtcacgctggaccaacggcggctcgctgccggctcagtcttcactggag
aacgagacgccggcagacgagaccatgtacgacggcgacctgaagcccagcggctctccg
tccctggaggaggacgaaggcttcagcgactggactcagcgccgagagagacggaggcag
cagcgcctgcaggagctcggccacggaggtgaggaggacgaggacgaggaggagaacgcc
ataaacaaagccgtgcccgtaaagagcgtccaggcgtcggtcgcgtcctctagccggctc
cagagacagcagcacgaagacgaagacgacggagccgcggtggcgatggggaggaggaag
gagcgagaggaggaggaggtggcgagggggaggagggagacacagagggaggaggaggaa
gacaagaggaagagacaggaagtgatgaccaggaagagggaggagattcaaaggccgaat
acagagatggagaaaagaaaagacgttaaaatctcctacacgtccaaggtgttccttcac
caagagtcgaaactcggcatcgccaacggagacgcaaccaaagaggaagtgacgtcgtac
aagagcaagacgacaaaaagacccaccagcagagccgcggagccggaggagtcgcaggcc
atcctggagacggagcggcgtctggagaagatccggctgggcctccagcagaaggagagc
caggagctggagcagctgagacaccgacaggcggaggccgagcaggagctggagcagctg
aagaaaaggagggaggagaggcgtcgagtccgagaggaagaggagcgtcgccgggaggag
gaggagcaccaacggctggccagagaggaggaggagaggaggcggatgaaggaagacatc
gagaagaggaggacggaggcagcagagaggatgaagagcctgagtacgctcagcgtggac
ggagacgaggcgttctgtcccttcagtcccaaagctcctactcacaagatcacagagaga
acgcagtcgctgaaccgctcgctgaagaaaagtaacagctttaagaagacgcagactctc
gtcctgctgcccaagatcgacgacaagctggagcagtacgcccacgctgtggagaactcc
caggaggctcgggcagtgaaggcaacactgacggacctgcccagctcgcctgaggtcgtc
gcctccaagaaaactctgtttgaggccggagaagcctggagccaagctcccgccaagcca
gctgcctgcaaggacgctgaggggttgaaggtggtcgtggccgagcggatcactcagtgg
gtgaaaggtccgtcagacggcagccgaccgtcgctctgtaaacccacagatgtgcggccc
ggagatgtgatgcagaaaaagaacatgtgggaagttatcggagactcgatagggcagccc
gggacacaaagagtcaagggttctgcagctgggaaaaagtacaaatttgtggtcactggt
cacggaaaatatgagaagatccccgtggacgacgagaacggaggagagttcattaacgga
gagtctgatttatatcacgatcgttactga
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