Sander lucioperca (pikeperch): 116036586
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Entry
116036586 CDS
T07345
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116036586 (ap5b1)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
116036586 (ap5b1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
PNMA
Motif
Other DBs
NCBI-GeneID:
116036586
NCBI-ProteinID:
XP_031136017
Ensembl:
ENSSLUG00000022344
UniProt:
A0A8D0DDH9
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Position
6:43554277..43561715
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AA seq
962 aa
AA seq
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MAVNWAETWAERISAFSRSPSRFLSGTTAEAFLAELLRELRDDRATYSVKILLLAPLCEY
PTLLCPSDSVGEETALELMSVLVQCPPKSVQFRCHLLLGLTSVLVCTSCVSGRSRASQDF
LDLLLQIAQDTSDLHADGALRSLRATACDCLRELEACSPGLLSQRLELLSGLRQRETSRL
HQAYAGLHTLVLRNAVYQLTQETGAGAEHLKALLGGNTSVAWEAELDSGPTQDEDPAVLS
SLILGPMGTVPTLQTGPDCKELRSVLSSLLEESYLLTAPCQAALLHRLTEVVAMVPGVPP
AVFRAQLLRLLGTSEVCLLHTTLLMKCAFTDSLFSAEDEAFILQRLVVLSQHPLLRTPEK
LFYTDCILHFPENRPIGCGDGDETLPVLLTPRLASALVPTVFNDSATMLARINLLSLVYL
EEGEEGDGEGGRGLAYLYEHLTSLLHIVENGGSRENVVTFFRAAFLFLFYFCHVERYFHS
MMEKLSTVYLCHTHLAPHFINLADRTQDKLSESSWAVGLLKALQGVITEAPLAQLTSQDL
SRHLKVLARVAEEGEIPQHSTLRFLSSVITPSSSCLCAIGNWRLGNSLLAVCRRLLVHPS
LDSLLMPLADILQHLACRYGDTDVQDHARLYYTLLTTLSREKLAAVLAQGSTEGGRQVKK
RSLSCIMVESERLTSMLTIHQTEKTIFKLIEAQSEPREGTQTDKGSDLIQNETETCPGEA
SAALEVYRAQFDVPGFASDITLNYQLAHTEAEDPRFDRLFSIRVHFNLTDNHYEQLGDIS
VPCLFRERPSPTVQLRLKPRRPYPTTLHASAILTTQDGLSWLTTLPHIHVAFQQAFAPLP
APPACGQRGKLCLFDGLWDEISSKSGEDLDDCATSLFCCPLKEAALIALVEEHFLPYLLS
DRSDKEEFKVLFFLPPQSHVLLKIRSEDPVHFNIATDNWQLLRYISSYLLTITSTQEDAV
TD
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaactgggccgagacctgggccgagaggatctctgctttctcccgcagtccg
tctcgcttcctctccgggacaacagctgaggctttcctcgcagagctgctccgggagctc
cgagatgaccgagccacttacagcgtcaagatcctcctgttggcccccctgtgtgagtac
ccgactctgctgtgtccctcagactcggtgggtgaggagacagccctggagctcatgtca
gtgctcgtccagtgtcctcccaagtcggtccagtttcggtgtcacctcctcctgggcctc
acctcagtgctcgtctgcacctcctgcgtgagcggccgctcccgtgcgtctcaagacttc
ctggacctgctcctccagatagcccaggacaccagtgatctccacgccgatggtgctctg
cgctctttacgggccacagcttgtgactgcctgcgggagttggaggcctgctctccaggc
cttctctcccagcgcctcgagctcttgagtgggctccggcagcgagagacatcccggctc
caccaggcctatgcgggactccacactctggtgttgagaaacgccgtgtaccagctcacc
caggagacaggagctggtgctgagcatcttaaggctcttctgggaggaaatacatcagtc
gcatgggaggcggagctggactcaggcccgacgcaggacgaagacccagctgtactgtct
tctctcatcctgggacccatgggtacagtgccaaccctccagactgggcctgattgtaag
gagttgcgttcagtcctctcctccctcctggaggagtcctacctcctcactgctccgtgt
caggctgcactgctgcataggctgacagaggtggttgccatggtgcctggtgtccctccc
gccgtattcagagctcagctgctgcgactgctgggcacgagcgaggtttgcctccttcac
accactctgctgatgaagtgtgcgttcacagacagcctgttcagcgcggaagacgaagct
ttcatcctccagcggctggtcgtgctctcccagcacccactgctacgcacacccgagaag
cttttctacacggactgcatcctgcacttccccgagaatcggccaatcggctgcggcgac
ggcgacgagaccctccccgtgctgctgaccccgcggcttgcctcggctttggtgcccacc
gtgttcaatgacagcgccaccatgctggcccgcatcaacctgctgtctctggtctacctg
gaggagggagaggaaggggacggagaggggggcagggggctggcctacctctacgaacac
ctcacctcgctgctgcacattgtggaaaacggaggcagccgagagaacgttgtcaccttc
ttcagagccgccttcctcttccttttctacttctgccacgtggagcgctactttcacagc
atgatggagaagctgagtacggtctacctctgccacacccacctggcgccacacttcatc
aacctggccgaccggacgcaggacaagctctctgagtccagctgggccgtggggttgctg
aaggctctccagggagtcatcactgaggccccgctcgcccagcttacttcacaagatctg
agccggcacctcaaggtgctggctcgagtggcagaggaaggagagatcccccagcacagc
acgctccgcttcctgtccagcgtcatcactccgtcgtcctcgtgcctgtgcgcgattggc
aactggcgtctggggaacagcctgctggcggtctgtcgccgcctcctggtccacccgagc
ctggactcgctgctcatgcctctggccgacatcctgcagcatctcgcctgccgctacgga
gacacggacgtccaggaccacgcccgcctctactacacccttctgaccacgctgtccagg
gagaagctggccgccgttttggcccagggttccaccgagggagggcggcaggtcaagaag
cggtcgctgtcgtgcatcatggttgagagtgagaggctgacgagcatgctaaccattcac
cagacggagaaaacgatattcaagctgattgaggcccagtctgagccacgagaaggaacg
caaactgataaaggaagtgacctgatccagaacgagacggagacctgcccaggagaggcc
agcgcagcgctggaagtatacagagctcagtttgacgtccctggctttgcctccgatatc
accttaaactaccagctggctcacaccgaagccgaagacccccgctttgatcggctcttc
agcatccgcgtccacttcaacctcacagacaaccactacgaacaattgggagacatcagc
gtcccgtgtctgttcagagagaggccgtcgccaaccgtccagctgaggctgaagcccaga
cggccctaccccaccaccctccacgccagcgccatcttgaccacccaggacggcctctcc
tggctcaccaccctgccacacatccacgtggctttccagcaggccttcgcaccactgccc
gctcctccggcctgcggacaacgcggcaaactgtgcttgtttgacggtttatgggatgaa
atcagctccaaaagcggagaggacctggacgactgtgctaccagcctgttctgctgcccg
ctgaaggaggcagctctgatcgccttggtggaggaacacttcctcccttaccttttatca
gatcgctccgataaagaagagttcaaagtgcttttcttcctcccgccacagtctcacgtg
ctgctgaagatcaggtccgaggaccctgtgcacttcaacatcgccacagataactggcag
cttctgcgttacataagttcttatctactgacaatcacgtccacacaggaagacgctgtg
actgactga
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