Sander lucioperca (pikeperch): 116036904
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Entry
116036904 CDS
T07345
Name
(RefSeq) transcription factor SOX-30-like isoform X1
KO
K09271
transcription factor SOX15/30
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116036904
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116036904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
116036904
NCBI-ProteinID:
XP_031136404
Ensembl:
ENSSLUG00000002914
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All DBs
Position
13:18337405..18340346
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AA seq
395 aa
AA seq
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MDIYLKNRKREPRLPTRNTGQDPAATPAFQFFQTGDAGQIPTLVGTGHRPRSNICENYVA
LVGASSEFEDGKLPPISTIFNKLLYKGVSAEVSGSGIRSETVTLGSCPEAGSQVSAVNFP
SGDQIFPLQVTEKLDKRQASTAGENWLNPDPVHLTTSLGVDSPVTTYTIPPTEEDLKQLQ
SGQDKNGHIKRPPNAFIVWSHIHRNALRKTRPGANMTDISIVLGCEWSKLSEEQKWPYYE
MAHKLKYMHRLQFPDYEFRPQKKKDIECLSSGQGAGQDPGVSFSQAVPPAHSQLQGLSVY
PYPAMMAYRVSYYPGSCPYHQMGPYSRVQSNCPRVFYRYPNAYSSTEEVRNYHNTLHQAA
SESIEQPDIVTSQQLSVNNKVECKYEDDVDVVGLF
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacatataccttaaaaatagaaaacgagaaccgcgtctgccaaccagaaacacgggc
caggacccagcggcgacgcccgcttttcagttctttcaaaccggagatgctggtcagatt
ccaacgctagtcgggaccggacataggcctaggtccaacatttgtgaaaactacgtggcc
ttagttggagcaagttctgaatttgaagacggaaagcttccacccatatcaactattttt
aacaaactactttataaaggtgtgtcagcggaggtgagtggcagcgggatcaggtcagaa
actgtgactttaggttcatgtccagaagcaggttctcaggtcagtgcagtgaattttcca
tctggggaccaaatattcccgctccaggtcaccgagaagctggataagagacaggccagt
acagctggagaaaactggctgaacccagatccagtccacctcacgacctcactcggagtt
gatagtccggtcaccacttacaccatcccgccaacggaggaagatctgaagcagttgcag
tctggccaagacaagaatggacacattaaacggccaccaaatgcctttatcgtgtggtct
catatccaccgaaatgccctgcgcaaaacccgccctggagccaacatgacagacatcagt
attgtgctgggctgtgagtggtccaagctcagtgaggaacagaagtggccctactatgaa
atggctcacaaactgaaatacatgcataggctgcaattccctgattatgagtttcgcccc
cagaagaagaaagacatagagtgtttgtcctcagggcagggagcaggacaggaccctggc
gtttccttctcacaggccgtgcctccagctcattcccagttgcagggccttagtgtgtac
ccatatcctgccatgatggcctacagagtgagctactacccaggttcttgcccatatcat
caaatgggcccctactccagggtccagtccaactgtccaagggttttttacagataccca
aatgcctacagctcaacggaggaagtgaggaattaccacaacactctgcatcaagccgca
tcagaaagcattgagcagcctgacattgtcaccagtcagcagctttcagtcaacaacaaa
gtagagtgcaaatatgaggatgatgttgatgttgttggactgttctaa
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