Sander lucioperca (pikeperch): 116036952
Help
Entry
116036952 CDS
T07345
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116036952 (rfc3)
03410 Base excision repair
116036952 (rfc3)
03420 Nucleotide excision repair
116036952 (rfc3)
03430 Mismatch repair
116036952 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116036952 (rfc3)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116036952 (rfc3)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116036952 (rfc3)
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116036952 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
116036952 (rfc3)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116036952 (rfc3)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116036952 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
116036952 (rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
AAA
AAA_22
nSTAND6
Sigma54_activ_2
AAA_16
AAA_11
MTC2_N
AAA_5
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116036952
NCBI-ProteinID:
XP_031136485
Ensembl:
ENSSLUG00000014537
UniProt:
A0A8C9Z3A8
LinkDB
All DBs
Position
13:16955630..16958748
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPTSLAKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTLAQSQQ
IQSSSQREFKVVLLTEVDRLTKDAQHALRRTMEKYMYTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCNVLTSICKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDVIMKGLVTELL
SNCDGQLKTEVAQMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDDMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtgggtggataaatatcgaccgacttccctcgcgaaactcgactatcataaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttccctcacttgttggtg
tacgggccgtcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagctggggtggagaagctccgtatagagcaccagaccatcgtggctccgtcaaagaag
aaaattgagattaacacaatagccagcaactaccacttggaagtcaacccaagtgatgct
ggcaaccaggaccgtgtggtgattcaagagctgattaaaactttggctcagtcccaacag
atccagtcaagctcccagagagagtttaaagtggtgttgctaaccgaggtggacagactc
acgaaggatgcccagcatgctttgcgccggacaatggaaaagtacatgtacacctgtcgt
ctcatcctctgctctacctccacctccaaagtcattgggccaattcggagccgttgtctg
gctatcagagttcctctgccgagcacagaagaggtctgtaatgttttgacgtcaatctgt
aaaaaggagggtctgctcctcccacctgagctggccaagcaaatctctgagaagtctggt
cgcaacctccgcaaagcccttttgatgtgtgaggcctgcagagtgcagcagtatccattc
tcagctgaccaagacgtcccagagacggactgggaggtctacctcagagaaaccgctaat
gccatcgtcagccagcagagccctcagaggttgttggaggttcgagccaggctgtacgag
ttgctgactcactgcatccctcctgatgtcattatgaagggtctggtaacagagttgttg
agtaactgtgatggtcagctgaagacagaggtggctcaaatggcagcctactacgaacac
agattgcagctgggcagcaaagctatctaccaccttgaggccttcacggccaagttcatg
gccatctacaagaagttcatggaagacggtctggatgacatgatgttttga
DBGET
integrated database retrieval system