KEGG   Sander lucioperca (pikeperch): 116036952
Entry
116036952         CDS       T07345                                 
Symbol
rfc3
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03030  DNA replication
sluc03410  Base excision repair
sluc03420  Nucleotide excision repair
sluc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116036952 (rfc3)
   03410 Base excision repair
    116036952 (rfc3)
   03420 Nucleotide excision repair
    116036952 (rfc3)
   03430 Mismatch repair
    116036952 (rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sluc03032]
    116036952 (rfc3)
   03036 Chromosome and associated proteins [BR:sluc03036]
    116036952 (rfc3)
   03400 DNA repair and recombination proteins [BR:sluc03400]
    116036952 (rfc3)
DNA replication proteins [BR:sluc03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116036952 (rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    116036952 (rfc3)
Chromosome and associated proteins [BR:sluc03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116036952 (rfc3)
DNA repair and recombination proteins [BR:sluc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116036952 (rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    116036952 (rfc3)
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Rad17 AAA AAA_22 nSTAND6 Sigma54_activ_2 AAA_16 AAA_11 MTC2_N AAA_5 ABC_tran
Other DBs
NCBI-GeneID: 116036952
NCBI-ProteinID: XP_031136485
Ensembl: ENSSLUG00000014537
UniProt: A0A8C9Z3A8
LinkDB
Position
13:16955630..16958748
AA seq 356 aa
MSLWVDKYRPTSLAKLDYHKEQATQLKNLVQCGDFPHLLVYGPSGAGKKTRIMCLLRELY
GAGVEKLRIEHQTIVAPSKKKIEINTIASNYHLEVNPSDAGNQDRVVIQELIKTLAQSQQ
IQSSSQREFKVVLLTEVDRLTKDAQHALRRTMEKYMYTCRLILCSTSTSKVIGPIRSRCL
AIRVPLPSTEEVCNVLTSICKKEGLLLPPELAKQISEKSGRNLRKALLMCEACRVQQYPF
SADQDVPETDWEVYLRETANAIVSQQSPQRLLEVRARLYELLTHCIPPDVIMKGLVTELL
SNCDGQLKTEVAQMAAYYEHRLQLGSKAIYHLEAFTAKFMAIYKKFMEDGLDDMMF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagtttgtgggtggataaatatcgaccgacttccctcgcgaaactcgactatcataaa
gagcaagcgactcagctgaaaaacctggttcaatgtggcgacttccctcacttgttggtg
tacgggccgtcaggcgcggggaagaagacccgcatcatgtgtctgctgagggagctgtat
ggagctggggtggagaagctccgtatagagcaccagaccatcgtggctccgtcaaagaag
aaaattgagattaacacaatagccagcaactaccacttggaagtcaacccaagtgatgct
ggcaaccaggaccgtgtggtgattcaagagctgattaaaactttggctcagtcccaacag
atccagtcaagctcccagagagagtttaaagtggtgttgctaaccgaggtggacagactc
acgaaggatgcccagcatgctttgcgccggacaatggaaaagtacatgtacacctgtcgt
ctcatcctctgctctacctccacctccaaagtcattgggccaattcggagccgttgtctg
gctatcagagttcctctgccgagcacagaagaggtctgtaatgttttgacgtcaatctgt
aaaaaggagggtctgctcctcccacctgagctggccaagcaaatctctgagaagtctggt
cgcaacctccgcaaagcccttttgatgtgtgaggcctgcagagtgcagcagtatccattc
tcagctgaccaagacgtcccagagacggactgggaggtctacctcagagaaaccgctaat
gccatcgtcagccagcagagccctcagaggttgttggaggttcgagccaggctgtacgag
ttgctgactcactgcatccctcctgatgtcattatgaagggtctggtaacagagttgttg
agtaactgtgatggtcagctgaagacagaggtggctcaaatggcagcctactacgaacac
agattgcagctgggcagcaaagctatctaccaccttgaggccttcacggccaagttcatg
gccatctacaagaagttcatggaagacggtctggatgacatgatgttttga

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