KEGG   Sander lucioperca (pikeperch): 116036992
Entry
116036992         CDS       T07345                                 
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    116036992 (exosc8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116036992 (exosc8)
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     116036992 (exosc8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C NYN_YacP
Other DBs
NCBI-GeneID: 116036992
NCBI-ProteinID: XP_031136560
Ensembl: ENSSLUG00000020158
UniProt: A0A8D0A096
LinkDB
Position
13:complement(16663299..16666527)
AA seq 277 aa
MAAGFKVAEPLEYHRSFLKDNCRPDGRELSEFRTTTLNIGSITTADGSALVKVGNTTVIC
GIKAELTNPIVEAPGKGYIVPNVDLPPLCSSRFRPGPPAEQAQAASQFIADVIESSEVIQ
TEDLCIERGKLCWVLYCDMMCLDYDGNVLDACIIALLAALKNTHLPEVTISTETSKPEVN
LEKRHGLHIHRHPVGASFCVFDDSILIVDPTAEEESLSTAQLTVVTDDEDRLCVVHKPGG
TSLSGEKLQECISRATARQREIQKLIDKVIHSVKTAQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggctggtttcaaggttgctgagcctctggagtaccacaggagctttctgaaagat
aactgtcgacctgatggacgggagctgtcagaattcagaaccacaacactaaacataggg
tccataaccacagccgatggctcagccctggtgaaggttggaaacaccacagtcatctgt
gggatcaaagcggagctgacaaaccctatagtggaggcacctggtaaaggttacatcgtg
cccaacgtggacctgccgccgctgtgttcctctcggtttcggccgggtccaccggcagag
caggcacaggctgccagccagttcatcgctgatgtcatcgaaagctctgaggtgatacaa
acggaggacttgtgcattgaaagaggaaagctctgctgggtgctctactgtgacatgatg
tgtctcgactacgatgggaacgtgttggatgcttgtatcattgccctgctggctgccctg
aagaacacacatctcccagaggtcactatcagcacagagactagtaaaccagaagtgaat
ttagaaaagagacatgggctgcatattcacagacatccagtcggtgcctctttttgtgtc
tttgatgactccatactgattgtagaccccacagctgaggaggagagtctgtcgaccgct
cagctcactgtagtgacagatgatgaagatcgactctgcgttgtacacaaaccaggtggg
acgtcactgtcgggagaaaagctgcaggagtgtatcagcagagcaacagcgcgacagaga
gaaatccagaaactaattgacaaagtcatacacagcgtgaagacagcacaataa

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