Sander lucioperca (pikeperch): 116036997
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Entry
116036997 CDS
T07345
Symbol
trpc4a
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116036997 (trpc4a)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
116036997 (trpc4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
Ank_5
PKD_channel
YVC1_C
Motif
Other DBs
NCBI-GeneID:
116036997
NCBI-ProteinID:
XP_035864759
Ensembl:
ENSSLUG00000020828
LinkDB
All DBs
Position
13:16547151..16573489
Genome browser
AA seq
966 aa
AA seq
DB search
MSQLYYRRTDSSSYRDRIPLRIVRAESELSPLEKAYLGAVEKGDYASVKQALEEAEIYFK
ININCIDPLGRTALLIAIENENLEIVELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKLLVQKGVSMPQPHEVRCNCVE
CVSSSDVDSLRHSRSRLNIYKALSSPSLIALSSEDPFLTAFRLSWELQELSKVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELEMILNYRDDTNLLEEEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFPGWRRRHWAGKFFTCVFIGLLYPLFALWYLIAPKSRHGLFIR
KPFIKFICHTASYLTFLFLLLLASQHIVTTEQDRQDRQGPAPTTVEWMILPWVLGFIWAE
IKQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKIVAYTKYSGSKPRNQWEMWHPTLVA
EAVFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYENKSSDEKGKCKGIRCVEQNNAFSTLFETLQSLFWSIFGLISLYVTNVDADHQFTE
FVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGATLP
APFNIIPSPKSFWYLICWIKRQVCKKTESKRPGTFGTLGRRAAENLRVNHQYQEVLRNLV
KRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVMGMVKTGKPALQGAKASGSSVESS
LAYPNASLKVSSSPQTSQVKSKLNRFKIIASILKQGSSTASPRPPEASNGLPYGLVVSDE
SSGKKSSQKRNTPKDITDFGLFQKRHWGSNEATSGAGEMYSLSEEAGESGGSDAEQQDKE
HRATGKDEKGLLQTEKEEEAAVNEALNENGEVSNTNNSSNEDGKKETEEKDKESLPCSDS
VAIVDV
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctgtactaccggcgaactgacagctcctcgtaccgggaccgcatcccgctg
agaattgtgagggccgagtcggagctgtcgcctttggagaaagcctaccttggagctgtg
gagaagggggactatgctagtgtaaaacaggctctggaggaggcagagatctacttcaaa
atcaacatcaactgtatcgacccactcggccgcacggctctgctgattgctattgaaaat
gagaacctggaaatcgtcgaactcttgctgagcttcaacgtctacgtcggcgatgccttg
ctgcatgcaatccgcaaggaagtggtgggagctgtggagctgttgctaaatcacaagaag
cctagtggtggcatgcaggttcctcctatcttattggacaagcagttctctgacttcacc
cctgacatcactcccatcatcctcgctgcacacaccaacaactatgaaattatcaagctt
ctggtgcagaaaggcgtgtctatgccgcagccacatgaggtgcgctgtaactgtgtggag
tgtgtgtctagttcagacgtggacagcctgcggcactcacgctcccgcctcaacatctac
aaagcgctgtctagtccctcgctaattgcgctctccagcgaagaccccttcctcactgca
ttcaggctcagctgggagctgcaggagctcagcaaggtggagaacgagttcaaatcagag
tatgaggagctgtctcagcagtgtaaacagtttgccaaggacctcttggaccagacaaga
agctccagagagctggagatgatcctcaactacagagacgacaccaacttattggaggag
gagggcaacaacgacctggcaagactcaaactagctatcaagtaccaccagaaagagttt
gtagctcagccaaactgccagcagcttttggcatcccggtggtacgatgagttccccggc
tggaggcggcgccactgggcagggaagttctttacctgtgtctttatcggcctcctctac
cccctgtttgctctctggtacctcatcgctcctaagagtcgccacggcctcttcatccgc
aagccttttatcaagttcatctgccacacagcttcctacttgacctttctattcctgctg
ctcctcgcctcccagcacattgtcaccacagagcaggacaggcaggacaggcaaggccct
gcaccaaccactgtggagtggatgatcctgccctgggtgctgggattcatctgggcagag
atcaaacaaatgtgggatggtggtttccaagactacatccatgactggtggaacctgatg
gactttgtcatgaactctctatacctggccaccatctccctcaagattgtagcctacact
aagtacagtggcagtaaacccaggaaccagtgggagatgtggcacccaacactcgtagct
gaggcagtgtttgccatagcgaacattttcagttccctgcgcctcatctcgctgttcaca
gccaactctcacctggggccgctgcagatctctctggggagaatgctgctggacatcctg
aagttcctcttcatctactgtctggtcctgcttgcctttgctaacgggctgaaccagctg
tacttttactatgagaacaagtcttccgatgagaagggaaaatgcaaaggcatccgctgt
gtggaacagaataacgctttctccacattatttgagacgctgcagtctctgttctggtca
atctttggtctgattagcctgtatgtcaccaacgtggatgcagaccatcagttcactgag
tttgtcggcgccaccatgttcggcacctacaacatcatctcactggtggtgctcctcaac
atgctcatagccatgatgaacaactcctatcagcacattgctgatcatgcagacattgag
tggaagtttgccaggacaaagctgtggatgagttactttgaagaaggggccactctgcca
gccccgttcaacatcatccccagccccaaatcattctggtacctcatatgctggataaag
aggcaagtgtgcaagaagacagaatccaagcgccccggaacgtttggaactcttgggagg
cgagcagcagagaacctgagggtaaaccatcagtatcaggaggtactaaggaacttggtg
aaacgttatgtggccgccatgatcagagatgccaagacagaggaaggcctgactgaggag
aacttcaaggagctgaaacaagatatctccagttttcgttacgaggtgatgggcatggtg
aagacagggaagcctgctctacagggggcaaaggccagtggcagctcagtggagtccagt
cttgcttaccccaatgcctcgctcaaggtttcttcctcccctcagaccagccaggtgaaa
agcaaactcaaccgattcaagatcatcgcatccatcctcaagcagggcagttctacagct
tcacccaggccgcctgaagcctccaacggtctaccttatggacttgtggtctctgatgag
agctccggcaaaaagtcaagccagaagcgaaatacccccaaagatatcactgactttggc
ctgttccagaaacgccactggggcagcaatgaagccacatcaggtgcaggagagatgtac
tctttgtcagaggaagcgggggagtccgggggctcagacgcagagcagcaggacaaagag
catagggcaacaggtaaggatgagaaaggactcctgcagacagaaaaggaggaggaagca
gcagtaaatgaggccctaaatgaaaacggcgaggtctcgaataccaataacagctcgaat
gaagatggaaaaaaagaaaccgaggagaaagataaagagagtttaccctgcagtgactct
gtagctatagtggatgtttga
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