Sander lucioperca (pikeperch): 116037189
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Entry
116037189 CDS
T07345
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X5
KO
K09273
upstream-binding transcription factor
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116037189
03021 Transcription machinery [BR:
sluc03021
]
116037189
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
116037189
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
116037189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
DUF4473
NOA36
HMG_WDHD1
VKGC_lumenal_dom
Motif
Other DBs
NCBI-GeneID:
116037189
NCBI-ProteinID:
XP_031136826
Ensembl:
ENSSLUG00000003335
LinkDB
All DBs
Position
9:38813322..38836864
Genome browser
AA seq
703 aa
AA seq
DB search
MMNGSSSVSAAQSARIKSEPDDWTKEDCLMLLERIRTLLPDTDAMKYKTTESHFDWDKVG
FGSFTGEMCRQKWQKVSSDVRKYRTMTELIVDATEFVKNPYKGKKLKTHPDFPKKPLTPY
FRFFMEKRAKYAKIHPEMSNLDLTKILSKKYKELPDKKKQKYITEFQREKEEFEKNMARF
KEDHPELIEERKKSDLPEKPKTPQQLWYNHEKKTYMKIHPDVSQKELKEALRRQWSQLSD
KRRLKWISKALELQKDYEGSMRAYHEAHPDVSSDDPVRSVLTKAERQLKDKFDGRPTKPP
PNGYSLYCAELMVNMKDVPSTERMVLCSKQWKMMTQKEKDMFQKRCEQRKKQYDIDLQRF
LESLPDEERGRVMGEEKLGGAKLGASPHRAKSPSVKERCREAEPETWTPAGQPKDRRDGK
KAAKLPETPKTAEEMWQHSVMGDYLAKYRSDRRKAQAAMEAAWKSMEKKEKIPWIKKAAE
DQKRYEVQYQPVRELLEMRAPPTTQSQRKPKFDGEPKKPPVSGYQMFSQELLTNGELNHF
SLKERMVEIGKRWHKLSQTQKDKYKKMVEEQQGEYKVELEGWVKSLSPQDRASYKEFSSS
KRRSTTKVRGAPGAKVRVTAKGKAAGSRAATQTVGVTKRAMAYRAKQDLSDSDEEKSESS
DSDEDDETSGSSDSEDDDDDENDDEDDDEDQSSSEESSDSDSD
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcagcagcagcgtctctgcggctcagagcgccaggatcaagagtgaacca
gatgattggacgaaggaggactgtctgatgctgctggagaggatccggactctgctgccc
gacaccgacgccatgaagtacaaaaccaccgagtcgcacttcgactgggacaaagtcggc
ttcggcagcttcaccggagaaatgtgccgccagaaatggcagaaagtctcctctgacgtc
cgtaagtacagaacgatgacggagctcatcgttgatgccactgagtttgtgaagaatccg
tacaaaggcaagaaactgaagactcatccagacttccctaaaaaacctctgactccgtac
ttccgcttcttcatggagaagagagccaaatacgccaaaatccacccagagatgagcaac
ctggacctgaccaagatcctgtccaagaagtacaaggagctgcctgacaagaagaagcaa
aagtacatcacagagttccagcgggagaaagaagagtttgagaagaacatggctcgattc
aaggaggaccatccggagctgatagaagagaggaagaagtctgacctgccagagaaacct
aaaaccccccaacagctgtggtacaaccacgagaagaagacctacatgaagatccaccct
gatgtgagccagaaggagctgaaggaggctctgaggagacagtggtcccagctctcagac
aagaggagactcaaatggatcagcaaagctctggagctgcagaaagactacgagggcagt
atgagagcgtaccatgaggcccatcctgatgtgtcctctgatgacccggtccggtcggtc
ctcactaaagcagaaagacagctgaaggacaagtttgatggacgaccaaccaaaccccca
cctaatgggtactccctgtactgcgctgagctgatggtgaacatgaaggacgtcccgagt
actgagcggatggtactctgcagtaaacagtggaagatgatgacgcagaaagagaaggac
atgttccagaaacgctgcgagcagaggaagaagcagtacgacatcgacctgcagaggttt
ctggagagtctccccgacgaggaacgaggccgggtcatgggcgaggagaaactgggcggg
gccaagctgggggccagcccccacagagccaagtctccttctgtcaaggagcggtgtcgg
gaggcggagccagagacgtggacgcccgccggacagcccaaagacagacgggacgggaag
aaggcggcgaagctcccggagacgccgaaaacagccgaggagatgtggcaacacagcgtg
atgggagactacctggccaaatacagaagcgaccgcaggaaggcccaggcagcgatggag
gcggcctggaagtcgatggagaagaaggagaagatcccctggatcaagaaggcagcggag
gaccagaaacgttacgaggttcagtaccaacccgtgagggagctgctggagatgagggcc
ccccccaccactcagagccagaggaaacccaaatttgatggagaaccaaagaaacctcca
gtgagcggctaccagatgttctcccaggagctgctgaccaatggcgagctgaaccacttc
agcctgaaggagcgcatggtggagatcgggaaacgctggcacaaactgagccagacgcag
aaagacaagtacaagaagatggtggaggagcagcagggggagtacaaggtggagctggag
ggctgggtcaagtctctgtctcctcaggaccgagccagctataaagagttctcctcctcg
aagcgacgcagcaccactaaggtgcgcggtgctcctggagctaaagtccgtgtgacggcg
aagggtaaggcggccggatctagagcagctacacagacggtcggagtcaccaagagagct
atggcatacagagctaagcaggacttgtccgactcagatgaggagaagagcgaatcgtcc
gactctgacgaagatgacgagacgtcgggaagctcagacagcgaggacgacgacgatgat
gagaatgatgatgaagatgacgatgaagatcagagctcctcggaggaatccagtgactcg
gactcggactag
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