KEGG   Sander lucioperca (pikeperch): 116037278
Entry
116037278         CDS       T07345                                 
Name
(RefSeq) inner ear-specific collagen
  KO
K24214  otolin-1
Organism
sluc  Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:sluc04990]
    116037278
Domain-containing proteins not elsewhere classified [BR:sluc04990]
 C1q domain-containing proteins
  Adiponectin / short collagen group proteins
   116037278
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 116037278
NCBI-ProteinID: XP_031136967
Ensembl: ENSSLUG00000024012
LinkDB
Position
9:12988463..12992187
AA seq 583 aa
MGLGILSHITKNKVLPCIQPALFHIPQESYNLFFPAHLPLNNPQCSVPCSLFGLPGQYKE
AGSLHQSVVGADGVKSQRHFHQQLIVALSMPFVRVVFLTTVLAVLMAVLASSARTTRWPK
PQTTKKPPRAGSSGGRTTTTTPPPSSSLHTDETTEVTTGAYSLSPTDSTTYSSDTFSTEF
HTDAVVPPGNTLGNYTLDYNECFFNFCECCPPEKGPVGPMGERGPPGPQGERGPLGLPGE
KGDTGLRGLPGPAGLPGANGLNGDIGDKGDQGPMGLPGAPGIPGKPGEKGDLGPRGEKGE
RGFSLKGDPGERGEPGLNGTKGSTGREGPMGPPGLAGTKGPKGEQGPIGDCLPGEKGDVG
ERGPPGLRGEMGPPGVNGTDGAKGERGEPGPPGGKGDNGARGPPGLPGGRGIAGLRGERG
AKGGRGPRGPKGPPGESVEQIRSAFSVGLFPSRSFPPPGLPVKFDKVFYNGEGHWDPTIN
KFNATYPGVYLFSYHITVRNRPVRAALVVNGVRKLRTRDSLYGQDIDQASNLVLMHLTEG
DQVWLETLRDWNGVYSSSEDDSTFSGFLLYPDPKNKPTDVENM
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgggccttggaatcttatcccatatcacaaagaataaagtcttgccttgtatacaacct
gctttatttcatatccctcaggagtcatataatctgttctttccagcccacctacctctt
aataacccccagtgttctgtcccttgttctctattcgggctaccgggccaatataaggaa
gcaggcagcctacatcaatcagtagttggagcggatggagtgaagagtcaacgccatttc
catcagcagcttattgtagccctcagcatgcctttcgttcgcgtagttttcctgacaact
gtccttgcggtactgatggccgtgctggcctccagcgcccgaaccacacgctggcccaaa
cctcagaccaccaagaagccccctcgagctgggagcagcggtggacggaccaccaccacg
accccacccccttccagcagcctgcacacagatgagacaactgaggttacgacgggcgca
tactccctgtcccctacagacagcaccacctactccagtgacacgttctccactgagttc
cacaccgatgccgtagtgccccccgggaacacccttggaaactatacccttgactacaat
gaatgcttcttcaacttctgtgagtgctgtccgccagagaaaggccccgtagggcccatg
ggagagagagggccaccgggaccacaaggagagaggggcccgctagggttaccaggagag
aagggagacacaggactaagaggacttccaggaccagcaggactacctggagccaacgga
ctcaatggcgacataggtgacaaaggtgatcaaggacccatgggtcttcctggtgcacct
gggatcccaggaaaaccaggagagaaaggtgatctgggccccagaggagagaaaggcgaa
cgtggcttcagtctgaaaggggacccgggagaaagaggagagcctggcctgaatgggact
aagggcagcaccgggcgagaggggcctatgggtccccctgggttagctgggacaaagggt
ccaaaaggtgaacagggacctataggcgactgtttaccaggcgagaaaggggatgtgggt
gagcgtgggccccctggtctgagaggtgagatgggccccccgggagtaaatggaactgat
ggtgccaagggagagagaggggagccagggcctccaggagggaagggggataatggtgcc
agagggcccccaggacttccaggagggaggggcatagcagggctgagaggagaaagggga
gctaaaggtgggcgtgggccccggggccctaaaggcccaccaggtgagagcgtggagcag
attcgctctgccttcagtgtgggcttgttccccagcaggtccttccctccgcccggcctg
cctgtgaagtttgataaggtgttttacaacggggaggggcactgggacccaacaatcaac
aagttcaatgccacatacccgggggtctacttattcagttaccacatcaccgtgcgcaac
cggcccgtgcgtgctgccctagttgttaacggggtacggaagctgcggactcgggattct
ctctacggccaggacatcgatcaggcgtccaacctcgtgctgatgcatctgactgaaggc
gaccaggtgtggctggagacgctgagagactggaacggcgtttactccagcagtgaggat
gacagcactttctctggcttcttgctttacccagacccaaagaacaaacctactgacgtg
gaaaacatgtga

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