Sander lucioperca (pikeperch): 116037278
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Entry
116037278 CDS
T07345
Name
(RefSeq) inner ear-specific collagen
KO
K24214
otolin-1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
116037278
Domain-containing proteins not elsewhere classified [BR:
sluc04990
]
C1q domain-containing proteins
Adiponectin / short collagen group proteins
116037278
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GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
116037278
NCBI-ProteinID:
XP_031136967
Ensembl:
ENSSLUG00000024012
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Position
9:12988463..12992187
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AA seq
583 aa
AA seq
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MGLGILSHITKNKVLPCIQPALFHIPQESYNLFFPAHLPLNNPQCSVPCSLFGLPGQYKE
AGSLHQSVVGADGVKSQRHFHQQLIVALSMPFVRVVFLTTVLAVLMAVLASSARTTRWPK
PQTTKKPPRAGSSGGRTTTTTPPPSSSLHTDETTEVTTGAYSLSPTDSTTYSSDTFSTEF
HTDAVVPPGNTLGNYTLDYNECFFNFCECCPPEKGPVGPMGERGPPGPQGERGPLGLPGE
KGDTGLRGLPGPAGLPGANGLNGDIGDKGDQGPMGLPGAPGIPGKPGEKGDLGPRGEKGE
RGFSLKGDPGERGEPGLNGTKGSTGREGPMGPPGLAGTKGPKGEQGPIGDCLPGEKGDVG
ERGPPGLRGEMGPPGVNGTDGAKGERGEPGPPGGKGDNGARGPPGLPGGRGIAGLRGERG
AKGGRGPRGPKGPPGESVEQIRSAFSVGLFPSRSFPPPGLPVKFDKVFYNGEGHWDPTIN
KFNATYPGVYLFSYHITVRNRPVRAALVVNGVRKLRTRDSLYGQDIDQASNLVLMHLTEG
DQVWLETLRDWNGVYSSSEDDSTFSGFLLYPDPKNKPTDVENM
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgggccttggaatcttatcccatatcacaaagaataaagtcttgccttgtatacaacct
gctttatttcatatccctcaggagtcatataatctgttctttccagcccacctacctctt
aataacccccagtgttctgtcccttgttctctattcgggctaccgggccaatataaggaa
gcaggcagcctacatcaatcagtagttggagcggatggagtgaagagtcaacgccatttc
catcagcagcttattgtagccctcagcatgcctttcgttcgcgtagttttcctgacaact
gtccttgcggtactgatggccgtgctggcctccagcgcccgaaccacacgctggcccaaa
cctcagaccaccaagaagccccctcgagctgggagcagcggtggacggaccaccaccacg
accccacccccttccagcagcctgcacacagatgagacaactgaggttacgacgggcgca
tactccctgtcccctacagacagcaccacctactccagtgacacgttctccactgagttc
cacaccgatgccgtagtgccccccgggaacacccttggaaactatacccttgactacaat
gaatgcttcttcaacttctgtgagtgctgtccgccagagaaaggccccgtagggcccatg
ggagagagagggccaccgggaccacaaggagagaggggcccgctagggttaccaggagag
aagggagacacaggactaagaggacttccaggaccagcaggactacctggagccaacgga
ctcaatggcgacataggtgacaaaggtgatcaaggacccatgggtcttcctggtgcacct
gggatcccaggaaaaccaggagagaaaggtgatctgggccccagaggagagaaaggcgaa
cgtggcttcagtctgaaaggggacccgggagaaagaggagagcctggcctgaatgggact
aagggcagcaccgggcgagaggggcctatgggtccccctgggttagctgggacaaagggt
ccaaaaggtgaacagggacctataggcgactgtttaccaggcgagaaaggggatgtgggt
gagcgtgggccccctggtctgagaggtgagatgggccccccgggagtaaatggaactgat
ggtgccaagggagagagaggggagccagggcctccaggagggaagggggataatggtgcc
agagggcccccaggacttccaggagggaggggcatagcagggctgagaggagaaagggga
gctaaaggtgggcgtgggccccggggccctaaaggcccaccaggtgagagcgtggagcag
attcgctctgccttcagtgtgggcttgttccccagcaggtccttccctccgcccggcctg
cctgtgaagtttgataaggtgttttacaacggggaggggcactgggacccaacaatcaac
aagttcaatgccacatacccgggggtctacttattcagttaccacatcaccgtgcgcaac
cggcccgtgcgtgctgccctagttgttaacggggtacggaagctgcggactcgggattct
ctctacggccaggacatcgatcaggcgtccaacctcgtgctgatgcatctgactgaaggc
gaccaggtgtggctggagacgctgagagactggaacggcgtttactccagcagtgaggat
gacagcactttctctggcttcttgctttacccagacccaaagaacaaacctactgacgtg
gaaaacatgtga
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