Sander lucioperca (pikeperch): 116037358
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Entry
116037358 CDS
T07345
Symbol
kcnn1a
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1a isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116037358 (kcnn1a)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
116037358 (kcnn1a)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
DALR_1
DUF7310
Motif
Other DBs
NCBI-GeneID:
116037358
NCBI-ProteinID:
XP_031137091
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Position
9:complement(35449976..35502165)
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AA seq
1011 aa
AA seq
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MRHRYAGAVQQHQPPDEKQASSKQSPDPVAPVFSLPPPPSSHHRDRTSNTAAHRQSLQEL
PCLSQPYRRPVHSGDPLPLASYDTAQQPSHRGTEPSIGQPAHLQQDPWAPAGSQQQPPPL
QSENQPVFPSCHCSFSEQEASLSQNHHHPADPLPPQPSPPFPPPIPPPPTSSSSSLLFSQ
GSKRGDRLRRSANNYQQASIVERCRGGGGAGGHRDQRQLLQQQQQQQHQQHSHLRLQQRD
PSPEGTRANSQKGRSLNVCESTEANRRAFESQTQDLQQQHIPQLRAQQQLLVGSSLPTNY
CASGSGELCRTQQAPLLQQQEQQQQQQPRQQQQQQQQGALGLCPQRPQHCEQERNKSGRI
TAQGDQAQPHSRDSRVTPPATQQAYAGNSSATGSNSSKDSPNYGSSYHLWPESPHKGEER
IRIDLHKATTEQKKLSHAGSKPSLSESSGRLPQIAMNTCKYNGGVVRPLVGSLASSSRRN
LAELDSETQPLQTLHSSGLEVVVSKGNGGEDPSKASNESLVREGSGHSGGRAPQKKNRDI
GYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWGVYTKESSYSFALKCLISLS
TVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIVLELLVCAIHPIPGQYVFTW
TARLAFTYTPSVADADVDIILSIPMFLRLYLIGRVMLLHSKLFTDASSRSIGALNKINFN
TRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDKQEVTSNFLGAMWLISITFL
SIGYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLCK
RVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQAIHQAQKLRSVKMEQRKLND
QANTLVDLAKTQNVMYDLVSELQERSEELDKRIGTLEDKLDLVTGSLQALPCLISQAITQ
QQQDFLDGFVHRFRPASLASERSERSERSWTSTARRRRSPSTAPHTSSDSG
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcggcatcggtacgcgggagctgtccaacagcaccaaccccccgacgaaaagcaagcg
agcagcaagcagagcccagacccagtcgctcctgttttcagcctgccgcccccgccctct
tctcaccaccgagaccgcacttcgaacaccgccgcgcaccgccagagcctccaggagctt
ccctgtctgagccagccctaccggagacctgttcacagcggcgaccctttacctctggcg
agctacgacaccgcccagcaaccttcacaccgaggcactgaacccagcatcgggcagccg
gcgcacctgcagcaggatccctgggccccggccggctctcagcagcagccgccgccgctg
cagtcggagaaccagcctgtttttccgagctgccactgcagtttttccgagcaggaggcg
agcctttctcaaaaccatcaccatcctgccgatcctctcccaccgcagccctccccacct
tttccgccgcctataccaccgccaccaacgtcgtcgtcctcctctctgctattttcccag
ggatctaagaggggggatcggctccgaaggagtgccaataattaccaacaggcaagcatc
gtggaacgctgcaggggaggaggaggagcaggagggcaccgagaccaaaggcagctgttg
cagcagcagcagcagcagcagcatcaacagcacagtcatttaagactccaacagagggac
ccctcccctgaaggaacccgtgcaaactcgcagaaagggcgctctttaaatgtatgtgag
tcaaccgaggctaacaggagagcatttgagtctcagactcaggacctgcagcagcaacat
atcccacaattacgagcgcagcaacagctactggtggggagcagcttgcctaccaactac
tgcgccagcggctcaggagagctatgtaggactcagcaggctccactgctgcaacagcaa
gagcagcagcagcagcagcagccgcggcagcagcagcagcagcagcagcaaggcgcactg
gggctctgtccccagcgtccgcagcactgtgaacaagagcgcaataagtctgggaggatc
accgcgcaaggcgaccaggcgcagccacacagccgcgactcccgcgtaacccccccggca
acacaacaggcgtacgcggggaactcgtctgcgactggcagcaacagcagcaaagacagc
cccaactacggctcgagctatcacctgtggccagagagcccgcataaaggagaggagagg
atacgcatcgacctccataaggccactactgagcagaagaagctgagccatgctggatcc
aagccctccctctccgagagcagtggccgactccctcagatagccatgaacacctgcaag
tacaatggcggagtggtgagaccactagtgggcagcctggcgtcctcgtcgcgccgcaac
ctcgcagagctcgactcggagacgcagcccttgcagacgctgcacagctctggcctggag
gtggtggtgtcgaagggcaacggcggcgaagaccccagcaaggcgtccaatgagagcttg
gtcagggagggcagcgggcatagcggaggcagggcgccgcagaagaagaacagggacatt
ggctacaggctcggccaccggcgggcgctgtttgagaagcggaagcggctcagcgactac
gcactcatcttcgggatgtttgggattgttgtcatggtgacagagacggaactgtcatgg
ggggtttacactaaggaatcttcatactcatttgcactgaaatgccttatcagcctttcc
actgttatattgcttggtcttataataatgtaccatgccagggaaatccagctgtttatg
gtcgacaatggtgcggacgattggaggatagccatgacgtacgagcggatcttctttatc
gtgctggagctgctggtgtgtgccatccatcccatcccgggccagtacgtcttcacctgg
acggcgcggctggccttcacctacacgccgtcggtggccgatgctgacgtggacattatc
ctctccatccccatgttcctgagactctacctgataggccgagtcatgttactccacagc
aagctgttcacggacgcttcgtctcgcagcatcggcgccctcaacaagatcaacttcaac
acccgctttgtcatgaagaccctcatgaccatctgtccaggaactgttctgctggtgttc
agtatatcctcctggatcattgctgcatggactgtgcgcgtctgtgagaggtatcatgac
aaacaggaagtgaccagtaacttccttggagccatgtggctcatttcgattaccttcctc
tccattggctacggggacatggtaccacacacgtactgtgggaaaggcgtgtgtctgctt
acagggattatgggagctggttgcactgcactggtggttgcagtggtagccaggaagctg
gagctgaccaaggctgagaaacatgtccacaattttatgatggacacacaactctgcaaa
cgagtaaagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacact
aagttggtcaagaagatagatcacgccaaggtgcggaaacaccagcgcaagtttctccaa
gccattcaccaagctcagaaactgcgtagtgtaaagatggagcagaggaaacttaatgat
caggctaacaccttggtggacctggccaagacccagaatgtgatgtatgacctggtgtca
gagctgcaggagcgcagtgaggagttggacaagcgcatcggcacattggaggacaagctg
gacttggtgacgggcagcctgcaggcgctgccctgcctcatctcccaagccataacccag
cagcagcaggacttcctggacggctttgttcaccgctttcggcccgcctcactagcctcc
gagcgctctgaacgctccgagcgatcctggacttccaccgcccgtaggcggcgctctccc
tccacagcaccacacacctcctccgatagcggatag
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