Sander lucioperca (pikeperch): 116037567
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Entry
116037567 CDS
T07345
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116037567 (chd9)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116037567 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
116037567
NCBI-ProteinID:
XP_031137348
Ensembl:
ENSSLUG00000020025
LinkDB
All DBs
Position
3:complement(11014309..11098914)
Genome browser
AA seq
3000 aa
AA seq
DB search
MDFFNDPNLFVGGLEGLDEDGFPSAPSLVDELNLTADFEPLQVEPLDPGKHQDMIPPVTT
QQAIPAYSQQIGHYIGIKAHNPMGQTFSGPGGTGGGGGDLIADQHGQYHNAAMSQVPQSN
GLFCNSSSPMWGNQDQNGNMYHPLSQQQQQLCQQQLHNQQLHVRQQQTQQQQHHPCHQQQ
EQQHRMQQQQLLQQQQSHQQQLINQHQQINTQTMSLQQQQRHNFSFQQGGQSQRQQQVHH
TQQQVEHQLTVEGPRFHSRAMPTKSYLDSQNASLSGTCLQPQQQQGSYQLTRGRLEDPNL
PFPMHSSSMVHSLSTCSLSSAAAYQAAQYPAYPGEPEIPSLSQQSLSMPTTTTAPLTSTV
PELSGTVCQFPSTAVRRTPVSQAEECPFRALRCSGETQGNCKSSEMFGASMNCYPSMSSH
LPSEQPQSCRAINTNGYQALGDTLLPSEAQDGDLEGLEPPDLLPDLLPQLEAALSQHDES
NCSWVDSSQERGHEHRKPPPVDYKEEKPRKNANGPGSQVRVLSPTIKSSSSSSSSSSSSS
SSSSSSSEKRTPRRTHHQMESPTQDKQEKANRIISEAIAKARQRGEKNIPRVMSPESFPS
SSSQYKHRKREHKGNGKARPKEKNCRKACIVPSSKPKQKAKIGKIVIKFGKKKKRKPESS
EESDDDPPTRHTSKDDDSKRRSGRQVKRKKYAEELEARLSDDEVKVIVKAKKTNTGASKQ
PAVQLFVENPSEEDAAVVDKIMSSRIVKKEVSPGVVVEGEEFFVKYKNYSYLHCEWATEQ
QLVKDKRIQQKIKRFKIKQAQRALFFADMEEDPFNPDYVEVDRVLEVSYCEDKDTGEEVV
YYLVKWCSLPYEDSTWELKDDVDQSKIEEFEQLQAVKPDSRRMERPPANLWKKREHSREY
RNGNSLRDYQLEGVNWLLFNWYNRRNCILADEMGLGKTIQSITFLEEIYRVGIKGPFLII
APLSTIANWEREFRTWTHLNVIVYHGSMVSRQMLQQYEMYFRDAQGRVMRGAYRFQAVIT
TFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGFKLMNLEHKVLLTGTPLQNTVE
ELFSLLHFLEPARFPSEITFMQEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKKLAPKE
ETIIEVELTNIQKKYYRAILEKNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGAE
EKILEDFREVYSPTAIDFHLQAMVQSAGKLVLIDKLLPKMKAGGHRVLIFSQMVRCLDIL
EDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDSERFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSM
SGRDNSLGGGAGGGAVQQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRR
TKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWDKWAKKADIDMEMANGRNSLVID
TPRVRKQTRPFSATKDELAELSEGNSDSDDTKPKLRRNHDRLNSYGRTECFRVEKNLLVY
GWGRWKDILNHGRFKKQLTERDVESICRALLSYCLVHYRGDDKIKSFMWDLIAPTEDGRT
KELQNHLGLSAPVPRGRKGKKMKIQSSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHHCN
KVLLRVRMLYYLKQEVIGSQAQRVLDGVDFSEIKIWVPEPDHSELPALWWDTISDKCLLL
GVYKHGYEKYNTVRADPTLCFLERVGRPDEKAIAAEQRGNDFMDGDVDDPEYKPAPALLK
DDMEDDASSPGDLVVTDNAGDAAPLTEGETSYWPSPSVLTARLRRLITASQRYTKSRQIL
QIHQTQTPSPSSMILSAPLCPLPPTLNDTLNPKMVAKIERQQRWTRREEADFYRVVSTFG
VVFDPNLGRFDWTKFRAMARLHKKTDESLQKYLCAFTAMCRRVCRLPPKEGDSAVDPSLT
IQPITEERASRTLYRVELLRQVREQVIRHQLLYERLPLCQMSSDLPVWWEAGTHDHDLLI
GAAKHGVSRTDYHILRDPELSFMAAQRNYSQTKSAQQQSHTSTLLLHPQCQASSSVLTGS
PLPPPAPRDAEPSGVVPKVELASEGEDGREKQGESWSPPRAPATPTGLEEKPVSEMRDKE
RQMVAARTKPLTPNSSERKPKKASKRSRREARRGSESDSDGSSSSSSSRSSSSSSSSSSS
SSHSGSSSSSSSSSCSSGSSSSSSSSSSSSEDSESEGGEGKKKGLSLCPVTFSVPAATTV
KGFDEDSVASLSTTQDETQDTHAAENGITNNSSHPFQGGGYMLAASYWPKDRVIINRLDS
ICQAVLKGKWSGTRRVYEPGGAVASFYTTKLLDNANSLCEDPSSSPQGSKVTKHVAENKE
FSVKLNDQEGGLKLTFQKQGLPLKRPLESEEGPQAQQQYLARLHELQSASDTGLADITKP
QCSFQTVPPGLTGQMRLNGVLDGQPVVKRRRGRRKNVEGMDLLFMNRSRVPAVPDQVPPG
WGGIGQVGMAVAPVPGFSQSSSQVPADTDSRVPVINLKDGTRLAGDDAPRRKDLEQWLME
HPGFVADTGAFIPGVNKMQMQFHFQDGRPKQKRHRCRNPNKIDVNSLTGEERVQIINRRN
ARKVGGAFAPPLKDLCRFLQENPEYGVPPEWADVVKQSGYLPESMFDRILTGPIVPEEVS
RRGRRPKNPLAKVAAAAAAAAPNPAASALGLNPMLANGLLSGMDLSSLQAFQQNLQSLQS
LQLTAGLMGLPSDASNLAASNLAAMFPMMLSGMAGLPNLLGMSSLLGKPAQEGTAGSEEK
TKGTSSAVTGELSASKAPSHTSDTKGERTEVSNSTPSSTSSSASSATAPQSASAASAASG
HPLSLNPLLLSSMLYPGMLLTPGLNLPVSATQPQSSNSDPTLPPARPPPPAVSQSSPQEI
ARRAAERDRGEDDEALEDEEEEDDSAEQKENSGPEGSGKAESSSSESGSSSSSDDSDSSD
NT seq
9003 nt
NT seq
+upstream
nt +downstream
nt
atggacttctttaatgaccccaacctctttgttggaggtttggaagggctggacgaggat
ggcttcccctcagcaccatcacttgtggatgagcttaacctcactgctgactttgagccc
ctccaagtggagcctctagacccagggaagcaccaagacatgatcccaccagttactacc
cagcaagccatacctgcttacagtcagcagataggtcactacattggcattaaggcacat
aatcctatgggacagacattttctggtcctgggggcacaggtggtggaggtggtgacttg
attgcagaccaacatggccagtaccataatgctgccatgagccaagtacctcaatccaat
gggctgttctgtaacagtagcagtccaatgtggggcaaccaagaccagaatgggaatatg
taccatccattatctcagcagcaacaacagctttgtcagcagcaactgcacaaccagcaa
cttcatgtccgacaacaacaaacacagcagcaacaacaccacccgtgtcatcaacaacag
gagcagcagcacagaatgcagcagcagcagctgctgcaacaacagcaaagtcatcagcaa
cagctgataaaccagcaccaacaaattaatacgcagactatgtccctgcagcaacagcag
cgtcacaatttctcctttcaacagggaggtcaatctcagcgccaacagcaagttcaccat
actcaacagcaggttgagcaccaactaactgtagaaggaccaaggttccattcaagggca
atgccaactaagtcttatttggatagtcaaaatgcttctctgagtgggacttgcctgcaa
ccacagcagcagcagggtagctaccagttgacgaggggacgactggaagaccctaacctg
cccttccccatgcattcttcatctatggttcactccctgtccacatgctcactcagttct
gctgctgcttaccaagctgctcagtaccctgcctaccctggagagccagaaatacccagt
ctcagtcagcagtcgttgtctatgcccaccaccaccacggcacccctcacttctacagtg
cctgagctctcagggacagtatgtcagtttccatccacagcagttaggaggaccccagtt
agccaggcagaggaatgtcctttccgggcccttcgttgctctggagaaacccagggaaac
tgcaagtcttctgagatgtttggcgcgtctatgaactgctaccccagcatgtccagccat
ctgccctctgagcagcctcagagctgcagggccatcaacactaatggataccaagcattg
ggagacactctcctgccatcagaggctcaggatggagacttggagggcctggagcctcct
gacctcctgcctgacctcctgccccagctggaggctgcactcagccaacatgatgaatcc
aactgttcctgggtcgattccagccaggagaggggacatgagcacaggaaacctccacct
gttgactacaaggaagaaaagcctcgaaagaacgctaatggtcctggtagccaggtacgg
gtcctcagtcccacaataaagagcagctcatcgtcctcctcctcttcctcatcgtcgtca
tcctcatccagctcctcatcggagaagaggacgccacgtaggacgcatcatcaaatggag
tcacctacacaggacaagcaggagaaggccaataggataatatcagaggcaattgctaag
gcccggcagcgtggggagaagaacatccccagagttatgagccctgagagcttcccgagc
tcttcctcgcagtacaagcaccgtaaacgtgagcacaaaggaaacggcaaggcacggcct
aaagagaagaactgtaggaaggcctgtattgtaccctcctccaagcccaagcagaaagcc
aagattgggaaaattgttatcaagtttgggaagaagaaaaagcgaaagcctgagtcttca
gaggagtcggatgatgaccctcccactcgacacacttctaaagatgacgactctaagagg
cgatcaggtcggcaggtgaaaagaaagaaatacgctgaagagctggaggccaggttgtca
gatgacgaggtcaaagttattgtcaaagccaagaaaaccaatactggagcatccaagcag
cctgctgttcaactctttgtagagaatcccagtgaagaggatgctgctgttgttgacaaa
atcatgtcttctcgtatcgtcaagaaggaggtttctccaggagtggtggtcgaaggggag
gagttttttgtcaaatacaaaaactactcctacctacactgtgagtgggccacagagcag
cagctggtgaaggacaagaggattcagcagaagatcaaacgtttcaagattaaacaagca
cagagggcactcttctttgcagatatggaagaggacccctttaaccctgactatgtagag
gtagacagagtgctggaggtatcttattgtgaggacaaagacacaggagaggaggtggtg
tactacctggtgaagtggtgctctctgccttatgaggacagcacctgggagctgaaggac
gacgtagatcagagcaagattgaagagtttgagcagctgcaggcagtcaagccagactca
aggaggatggagcggccaccggcaaatctgtggaagaagagggaacattcgagagaatac
aggaatggcaacagcctcagggactaccaactagagggggtcaactggctcctcttcaac
tggtacaacagacgaaactgcatcctggcagacgagatgggcctgggaaagaccatccag
tccatcacattcctagaggagatatatcgtgtgggcattaaagggccattcctcatcatt
gcgccgctctccaccattgccaactgggagcgcgagttccgtacttggacccatctcaat
gtcattgtctaccatggaagcatggtcagcaggcagatgctccagcagtatgagatgtat
ttcagggatgcacagggccgtgtgatgcgaggtgcctacaggttccaagccgttatcaca
acgtttgagatgatcctgggaggctgtcccgaactcaacgccatagagtggcgctgtgtt
atcatcgatgaggcccaccgcctcaagaacaagaactgcaaactgctagagggctttaag
ctcatgaacctggagcacaaggtcctgctgacaggtactcctcttcagaacacagtggag
gagctcttcagcctcctccatttcctggagccggcacgcttcccctcagaaatcaccttc
atgcaggagtttggagacctcaagactgaggagcaggtacagaagcttcaggggatcctg
aagcccatgatgttgcgtcggttaaaggaggacgtggagaagaagttggctcctaaagag
gaaaccatcatcgaggttgagctcaccaacattcaaaagaaatactatcgtgccatccta
gagaagaacttctctttcctggctaaaggagctggccaggcaaatatgcccaacctggtc
aacaccatgatggagctgagaaagtgctgcaaccacccctacctcatcaaaggggcagaa
gagaagatcctagaggacttcagggaggtgtatagccccactgccatcgactttcacctg
caagctatggtgcagtctgccgggaagctggtccttattgacaaactgctgcccaagatg
aaggccggagggcacagggtgcttatcttctctcaaatggtgcgctgcctggacatcttg
gaagactacctcattcagagaaggtacttgtatgagcgaatagatggccgtgttcgtggg
aacctgcggcaggcagctatcgaccgcttcagtaagcctgactcggaacgcttcgttttc
cttctgtgcacaagagctggtggcctgggaatcaacctcacagcagcagacacatgcatc
atctttgactcggactggaacccgcagaacgacctgcaggcccaggctcgctgccatcgg
atcggtcagaacaaggcagtgaaggtgtaccgtctgatcaccaggaactcgtacgagcga
gagatgtttgatcgcgccagcctcaagctgggcctggacaaagcagtgctgcagagcatg
agtggccgagataacagcctgggaggaggcgccgggggaggggcagtgcagcaacagcag
ctgtctaagaaggagattgaagatctgttgcgacgtggtgcatacggggccatcatggat
gaggaggatgaaggggccaaattctgtgaggaggatatcgatcagatcctccagcgcagg
acaaagaccatcaccatcgagtctgagggacgaggatccacctttgctaaggccagtttt
gtggcatccggaaaccgcacagacatctctctggatgaccccaacttttgggacaaatgg
gccaaaaaagctgacattgatatggagatggccaacggcagaaacagcttggtgattgac
actcctcgtgtcagaaagcagacaaggccgttcagtgccaccaaggatgagttggcagag
ctttcagagggcaacagcgacagtgacgacaccaaacctaaactcaggcgaaaccatgac
cgcctgaacagctatggacgcacagagtgcttcagagtagagaagaacctgcttgtttat
gggtggggtcgttggaaggatattctcaaccatgggcgttttaagaagcaactgacagag
agggatgtggagtccatctgcagggccctgctgtcttactgcctggtccattaccgtgga
gatgacaaaattaaaagcttcatgtgggacctgatcgcccctactgaggatggacgcacc
aaggagctgcagaatcacctgggtctgtctgctccagtccctcggggcagaaagggtaag
aaaatgaagatccagtccagctcttttgacatccacaaagctgagtggcttaggaagcac
aatccagagcacatgcttcaggatgacggctacaagaaacacctcaaacaccactgcaac
aaggtgctgctcagggtcagaatgctctactacctgaaacaagaggtcataggaagccag
gcccagagggtgctagacggcgtggacttcagtgagataaagatctgggtgccagaacct
gatcattcggagctgccagccttgtggtgggataccatttctgacaagtgtctgctgctg
ggtgtctataagcatggttatgagaagtacaacactgttcgtgcagatcctaccctgtgc
ttcctagagcgtgtgggacgaccagatgagaaggccatcgctgctgaacagagaggcaac
gattttatggatggggatgtggatgacccagagtacaagcctgctccagccctgctgaag
gacgatatggaggatgacgcctcttctcctggagacttggttgtcactgacaacgctgga
gatgcagccccattgacagaaggcgaaacttcctactggccctcaccctcggtgctgaca
gccagactaaggcgactaatcacagcctctcaacgctacaccaagagccggcagatcctc
cagatccaccagacccagactccctctccgtcgtccatgatactgtcggctccactctgc
ccgctgccccctacactcaacgacacgctcaaccccaagatggtcgctaagattgaacgg
caacaaaggtggaccaggcgagaagaggctgacttctaccgtgtggtctccacttttggt
gttgttttcgacccaaaccttggccggtttgactggaccaagttcagggccatggctcgg
ctgcacaagaagactgacgagagcctgcagaaatacctgtgtgcttttacagccatgtgc
cggagggtgtgtcgcctgccacccaaagagggagactctgcagtggacccgtctctgacc
atccagcccatcacagaggagcgagcatctcgtacactgtacagagtagagttgcttcgc
caggtgagggaacaagtaatccgccatcagttactctatgagcgcctgccgctgtgccag
atgagctctgacttgcccgtctggtgggaggctggtacccatgaccacgacctgctaatc
ggagctgccaagcatggcgtcagccgcacagattaccacattctgagagaccctgagctc
agcttcatggctgcccaacgcaactacagccaaacaaaatctgcacagcagcaatcgcac
acatccaccctgcttctacaccctcagtgccaggcctctagctcagtgttgacaggttct
ccgctgcctccacccgcgccgagagatgcagagcccagtggggttgtacctaaagtggaa
ctcgcctcagagggggaggacggccgggaaaagcagggggagagttggagccctcctcga
gcaccagctactcccacaggtctggaggagaagccggtgtctgagatgagggataaagag
aggcagatggtggcagcacgaaccaaacccctgacacccaactcctctgagaggaaacct
aagaaggccagcaagaggagccgcagggaggctaggcgtggctcagagtctgactcagat
ggctcttcctcaagctcttcatcacgctcctcttcctcctcctcatcatcctcttcttcc
tcgtcacattccgggtccagctcatcctcctcttcatcatcttgctcctctggctcttcg
tcatcctcgtcgtcctcctcatcctcttcagaggacagtgaaagtgagggaggggaaggg
aagaagaaaggtctgtctctgtgtcctgtgacattctcagtgccggcagcaacaactgta
aagggctttgatgaggatagtgtggcgtctttgagcactacacaggatgaaacccaagac
acccatgcggccgagaatggcatcactaacaactcctcgcatcctttccagggaggaggg
tacatgctcgctgcatcctactggccaaaggatcgtgtgatcatcaaccgcctggacagc
atctgccaggcagtgctgaagggcaagtggtcaggaacacgtcgggtctacgagcctgga
ggtgcagtggcctccttctacaccaccaagctgctggacaacgccaacagcctgtgcgag
gacccctcttcctcaccacaggggtcaaaggtgaccaagcatgttgcagaaaacaaggag
ttctcagtaaaactcaacgatcaggagggaggtctgaagttgaccttccagaaacaaggt
ctacctctgaagaggcccctggagtcggaagagggcccccaggcccagcagcagtacctg
gcgcggcttcatgagctacagagcgcctcggacacaggcctggcagacatcaccaagcct
cagtgcagcttccagactgtgcctccaggtcttactggtcagatgaggctcaacggagta
ttggatggccagccagtggttaagaggcggagggggaggaggaagaacgtggaggggatg
gacctgctcttcatgaacaggagtagagtccctgctgttcctgatcaggtgcctccaggg
tggggtggtattggccaggtgggcatggctgtggcccctgtgccgggcttcagccagagc
tccagtcaggtcccagcggacactgacagcagggtccccgtcatcaacctcaaagatggc
actcggctcgctggggacgacgctcccaggaggaaagatctggaacagtggctaatggag
caccctggctttgtggcagacacaggagcctttatccctggggtaaacaagatgcaaatg
cagttccacttccaggacggtcggcccaagcagaagaggcaccgctgcaggaaccccaac
aagattgatgtgaacagcctgacgggagaggaaagggtccagatcatcaacaggagaaat
gcacgcaaggttggtggagcctttgctcctcctctgaaggatctgtgccggttccttcag
gagaaccctgagtacggagtcccacctgaatgggctgatgttgtcaaacagtcgggttac
ctcccagagagcatgtttgacaggatcctgacggggcccatcgttcccgaggaggtgagc
cgacgtggacgccgacctaagaatcctctggctaaggtggcggcggcagcagccgctgct
gcacccaacccagcagcctccgccctgggtctgaaccccatgctggccaacggcctcctc
tctggaatggacctgagcagcctgcaggccttccagcaaaacctccagagcttacagtcc
ctgcagctcaccgcaggcctgatggggctgccgtctgacgctagcaacctggccgcaagt
aacttagctgccatgtttcccatgatgctgtctggtatggctggattgccaaacctgctt
ggcatgagcagcttgctcgggaagcctgctcaggaaggcacagcaggctctgaggagaag
acaaagggaaccagcagcgctgtgacaggagagctgtctgcctctaaagccccctctcac
acctcagacaccaaaggagaaaggacagaggtctcaaactctactccttcctccacttcc
agctccgcttcctctgctaccgccccacaaagtgcttcagctgcctctgcagcctccggt
cacccactgtctcttaaccccttgttactctccagtatgctttacccagggatgcttctc
actccaggccttaaccttcctgtgtctgccacacagcctcagagctcaaacagtgacccc
accctacctcctgctcgtcctccgccacctgcagtctcccagtcatcgccacaggagata
gctcggcgagcggcagaaagggacagaggcgaggatgacgaggcattagaagacgaagaa
gaagaagacgactctgcagaacaaaaggaaaacagtggtcctgagggttcggggaaagct
gagtcatcttcatcagagtctgggagctcttcttcatcagatgattcagactccagtgat
tag
DBGET
integrated database retrieval system
