Sander lucioperca (pikeperch): 116037578
Help
Entry
116037578 CDS
T07345
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X3
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116037578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116037578
03036 Chromosome and associated proteins [BR:
sluc03036
]
116037578
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116037578
Coactivators
SAGA/TFTC/STAGA complex
116037578
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116037578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
116037578
NCBI-ProteinID:
XP_031137377
LinkDB
All DBs
Position
3:complement(9981048..10066605)
Genome browser
AA seq
1030 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLADQSNPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRYKPEMRQEIKSKDVSLDKTVTSPSLGCTPSFGEPPTTSAAC
VNATSSGSQSHGASITTLTASGVSTLAPTPASISTTSSRGSKVSPGTGETSTEANPPRKR
ITTPRRSASARIKSLNGAALTTRRNSNTAVADNVNVSSVDTSVTNVTPNSTSPATSSINT
STFTLSNANLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTNVSALVQQVARIGP
ITSSTSQGDHSKTVTETGASKTDDCQSKIVMSSQSGNVNSVISTVPSAPSVVTPPTTTTA
AAATTTTTVTQPLRSVTAAACVTGVTASSVCGTGQTTSVTTTISMVRPTAPSPTPAVATS
AQSQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQA
LAQAQAQAQAQAQNNISPRPATPTTGASFRVTTPQKGPVAPAVAVTAPQQTPVVMAPQAP
AQAASQPVQPPQTGITANPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVK
SLVQDLLDAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSPTPTPQQ
GVKPAPGGPPPAIVAGPAVRIRHPNSVSITTGAKALPAGTLGHAAGMGIKTAGAVSGQVR
MPVVITQSVRAQGTMGRGGIIQAGKSPVGLSVHYSGNQKNKLNDPGGGSFRDDDDINDVA
SMAGVNLNEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEA
VTFISHATQSRLRTVVEKVSSIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKQRK
DEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKR
KMDSPGNTPSGTEVSGSTVGSLASSSTPSTSSRQYTRQRITRVNLRDLIFYMEQERETAH
SLLLYRALLK
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtcacagcttgctgaccaaagcaacccagcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctgccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgttat
aaacccgaaatgcgccaggagatcaagtctaaagacgttagcctggataaaactgtcaca
tctccttctctgggctgtaccccttcttttggcgagcctcccaccacttcggctgcttgt
gtgaacgccactagcagcggttcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggcaccaacgccagccagcatcagcaccacatccagccggggg
tctaaggttagccccggcacaggtgagacgtcgacagaagctaacccaccgagaaaacgc
ataaccacaccgcggaggagcgcttcggctcggataaagagtttgaacggcgcagctcta
acgactagaaggaacagcaacacagcggtggctgacaacgttaacgttagctctgtggat
actagtgtaactaacgttacaccaaactctacttcaccggcgacatcctctattaacact
tcgactttcaccctatcaaacgctaacctccccgtagggcagtcggctattgctctggac
cgggggactcctaccattgctttgcatagacttccgagtcatattgtagcgagtatagct
caaaacggcaacgggaccaatgtttcggccttggtccaacaggtcgctcgcatcggaccc
atcacctcctcaacttcacagggggaccacagcaaaacggtcacagaaactggggcttcc
aaaacagacgattgtcagtccaaaattgtaatgtcaagccagtctggtaatgtcaactct
gtaataagcactgttccctctgcgccttctgttgtcacaccaccaacaacaactacagca
gcagcagctacaacaaccacaacagtaacccagcctttgaggtctgtaacagctgctgct
tgtgttacaggggtgacagcaagttctgtatgtggaactggtcaaactacatcagtgact
accactattagcatggtcaggcccacagccccctccccaacacctgctgtggccacttcc
gcacagtctcagccccgtcctggacttactgcacctcaaaggatcgtagccccccagctg
attgtcagaccacctcagcagcagacgaccattcagctgccccctgggtttaccatccca
ccggggatggtgttggtacgcacggagttgggccagctagtgatggttcctcagcaggct
ttggctcaagctcaggctcaagctcaggctcaggcccagaacaacatctctccacgaccg
gccacccccacaacaggagcatccttcagagtaacaactcctcagaagggccccgtggca
ccggccgtggcagtgacggctccgcagcagacccccgtggttatggccccccaggccccg
gcccaggctgcctcccagccagtgcagcctccgcagacgggcatcaccgcgaaccccgga
ggtcctgtcgtgtcccaggaaatgcaagagaatgtcaagaagtgtaagaatttcctggcc
acacttatcaagctggcatctcacaactctccgtctcctgagacttccaagaatgtcaaa
tctctggttcaggacctgctggatgcgaagattgaaccggaggagttcaccagccggctg
cagactgagctcaaatcgtctccacagccttacctggtgccttttctcaagaagagcctc
ccggccctgaggctatctttgctgaatagtcagcagtccccgaccccgaccccgcagcag
ggagtcaaaccagcacccggcggcccccctcctgccattgtggctgggccagctgtccgc
atacgccaccctaacagtgtcagcatcactacgggtgccaaggctctgcccgctgggacg
ctgggacatgcagctggcatgggtatcaagacagcaggcgctgtcagtggccaggtccgg
atgcccgtggtgatcacacagtctgtcagagcgcaaggcacaatggggaggggaggcatc
atccaagcaggcaaaagtcccgtgggcctttctgttcactactctgggaatcagaaaaac
aagctcaacgaccccggaggaggttctttcagggatgatgatgacatcaatgacgtagcc
tccatggccggggtgaacctgaatgaggagagcgcaagaatactcgccaccaactctgaa
ctagtgggaacgcacatccgctcatgtaaagacgaggcctttctccacccgggacttctc
catcgacgaattctggaaacggctaagaagtttggcgtcacagaggtccctatggaggcg
gttacattcatctcacatgccacacagtcacgacttcgaactgttgtagaaaaggtttct
tccatcgcacagcaccgactggactcttgtaaggatgacgagtgctacgagcagtcggca
gacgttcgctctcagcttcgatttttcgagcagctggagagaatggagaagcagaggaag
gacgagcaggagagagagatcctgttgaaagccgctaaaagtcgctccaggcaagaggac
ccagagcaagctcgactgaaacagaaagctaaggagatgcaacaacaggaactggcacag
atgaggcagcgagatgccaaccttacagcactagccgccattggaccccgcaaaaaacgt
aaaatggattcaccagggaacaccccatcagggaccgaggtttcaggcagcacggtgggc
tccctggccagctcctccaccccgtccacctcatcacgccagtacacacggcaacgcatc
actcgcgtcaacctcagggacttaattttctacatggagcaggagagagagaccgcccac
tcgctcctcctttaccgcgccctgctcaagtag
DBGET
integrated database retrieval system
