Sander lucioperca (pikeperch): 116037820
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Entry
116037820 CDS
T07345
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03030
DNA replication
sluc03410
Base excision repair
sluc03420
Nucleotide excision repair
sluc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116037820
03410 Base excision repair
116037820
03420 Nucleotide excision repair
116037820
03430 Mismatch repair
116037820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluc03032
]
116037820
03036 Chromosome and associated proteins [BR:
sluc03036
]
116037820
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116037820
DNA replication proteins [BR:
sluc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
116037820
DNA Replication Termination Factors
ELG1-RFC complex
116037820
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
116037820
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
116037820
Check point factors
HRAD17(Rad24)-RFC complex
116037820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
RCF1-5-like_lid
Rad17
AAA_22
AAA_16
Mg_chelatase
nSTAND3
AAA_24
AAA_11
Viral_helicase1
RuvB_N
AAA_5
AAA_19
AAA_18
DNAX_ATPase_lid
ABC_tran
MipZ
MeaB
DUF815
AAA_28
AAA_30
AAA_assoc_2
AAA_25
AAA_23
NTPase_1
bpMoxR
AAA_7
FtsK_SpoIIIE
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
116037820
NCBI-ProteinID:
XP_031137729
Ensembl:
ENSSLUG00000007403
LinkDB
All DBs
Position
13:complement(20648784..20651495)
Genome browser
AA seq
348 aa
AA seq
DB search
MVEAECEQQKPVDSAQKAYSGAGDPADRVSYELPWVEKYRPVKLNQIVGNEETVSRLEVF
AREGNVPNIIIAGPPGTGKTTSILCLSRALLGASMKDAVLELNASNERGIEVVRNKIKMF
AQQKVTLPKGRHKIIFLDEADSMTDCAQQALRRIIEIYSKTTRFALVCNTSDKIIEPIQS
RCAVLRYAKMTDGQILARLQDVVQKEELSVSDGGLEAVIFTAQGDMRQALTNLQSTHSGF
GFINSENVFKVCDEPHPLLVKSMLEHCVAGDIDQAYKVVESLWALGYSPDDIIGNIFRVC
KVLPMAEYLKLEFIKEIGYTHMRMSEGVNSLLQMAGLLGRLCRRPANS
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggctgagtgcgagcagcagaagccggtagacagcgctcagaaggcgtattca
ggagcaggagaccccgcggatagagtctcctacgagctgccctgggtggagaaatacagg
ccggtcaaactgaaccagatcgtggggaacgaagagacggtgagtcggctggaagtgttc
gccagagagggaaatgtccccaacatcatcatagcaggtcctccaggaacagggaagacc
accagcatcctgtgtttgtcccgggcgctgctgggagcctccatgaaggacgccgtgctg
gagctcaacgcctccaacgaaaggggaatcgaagtggtgaggaacaagatcaagatgttt
gctcagcagaaagtcacgctgcccaaaggacgacacaagatcatcttcctggacgaagcc
gatagcatgacggactgcgcccagcaggcgctgcggaggatcatcgagatctactcaaag
acgacgcgcttcgctctggtgtgcaacacgtcagataagattatcgagcccatccagtcg
cgctgcgccgtgctgcgctacgccaagatgacagacgggcagatcctggcacgcctgcag
gacgtcgtccagaaggaggagctgtcggtgtctgacggcggtctggaggccgtcatcttc
accgcacagggagatatgagacaggcgctaactaaccttcagtcgacccactccggcttc
ggcttcatcaacagtgagaacgtgttcaaagtgtgcgatgagccccaccctctgctggtg
aaatccatgctggaacactgcgtggcgggcgacattgaccaggcgtacaaagtggtggag
tcgctgtgggcgctcggatactcgccagatgacatcatcgggaacattttccgggtttgc
aaggtcctccccatggccgagtacctcaagctggagttcatcaaggagataggttacact
cacatgaggatgtctgaaggcgtgaactctctgctgcagatggccgggctgctggggaga
ctctgcagacggcccgctaacagctga
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integrated database retrieval system
