Sander lucioperca (pikeperch): 116037826
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Entry
116037826 CDS
T07345
Symbol
itga4
Name
(RefSeq) integrin alpha-4
KO
K06483
integrin alpha 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04510
Focal adhesion
sluc04512
ECM-receptor interaction
sluc04514
Cell adhesion molecules
sluc04672
Intestinal immune network for IgA production
sluc04810
Regulation of actin cytoskeleton
sluc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116037826 (itga4)
04514 Cell adhesion molecules
116037826 (itga4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116037826 (itga4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116037826 (itga4)
04810 Regulation of actin cytoskeleton
116037826 (itga4)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
116037826 (itga4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116037826 (itga4)
04515 Cell adhesion molecules [BR:
sluc04515
]
116037826 (itga4)
04090 CD molecules [BR:
sluc04090
]
116037826 (itga4)
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116037826 (itga4)
Exosomal proteins of other cancer cells
116037826 (itga4)
Cell adhesion molecules [BR:
sluc04515
]
Integrins
Integrin alpha subunits
116037826 (itga4)
CD molecules [BR:
sluc04090
]
Proteins
116037826 (itga4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF11
Motif
Other DBs
NCBI-GeneID:
116037826
NCBI-ProteinID:
XP_031137766
Ensembl:
ENSSLUG00000000735
LinkDB
All DBs
Position
8:36589004..36612763
Genome browser
AA seq
1031 aa
AA seq
DB search
MRPSAGSVSAYCSLVLVLVQVLVLVHPAAGYSLDQEHSLEFSGPPSSMFGYSVLLHRHGA
HSWLVVGAPVANSSSSPSVRSPGAIYRCSITAESRHCHPMHPDVLNCGKTCDAESDHQWL
GVSLSRQPGDNGGHILACAHRWKNVYYSKKEGQNHKLPNGVCYRYANDLRHPQPIIPCYR
DHQRKFGEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVFNTSSGGMSVYLDDDAGA
VSFGSYLGYAVGAGHFLSPGTVEVLGGAPQYNQKGKVFIFVVDNNMLRVVSEVSGKELGS
YFGSSVCAVDLNADGLSDLLVGAPMATGITREEGRVHVYINQGQAKLLEAGFQLIGSDAY
AARFGETIANLGDLDDDGYPDVAVGAPQEDDLKGAVYIYNGRKEGISPTPSQRITGSTLG
RDLRMFGQSLSSGIDIDDNGYQDVAVGAFLSDSAVVLRTRPVIQVKASVALPEQIDQRVA
LCREHKTPTVCLNVTVCFSVRSRQFRGAIDLQYNLTSDLLHKPSFPHRFYFHGNGSSNST
RGRVKARHGQVTCATHVAYQRKDVRDIFTPVKFEVSYNHRETNTHKASSKTFPPLKPILQ
QSAGHQNTITNQTWFARSCSLVNCSTNMQLSAQLVLPDQQQYFALGSGQTIMLKTSLLNS
GDDAFLPRLTLRFPNNIHYIKVLQSQDNMISCDVTQEVNSSTAGVDCSVTSLLLSAHAQL
NISFLLDVNQNSTPGDIIIHVNTSSDNYEKEEYLHDNSISLLLPLKYGVNVNIHGFVTPT
SFVFGDEDNIPVDCYAETFNYTYKVLNSGPSRSLDTVVDISLPKILTPYRHRLLQVVDWQ
SSQGMCSISDTTVSVIEDCDVSEASFIQKLVFFFSSTSTRRMFCGRGDELCERLECRLGN
LEAGRDAFIQLEIRLNPAVLLQAPGRHGVMKLESTAMMSNPRESPHTILISEQPVAEVVV
EALFTQKPSTTVKVFIIVVSLVLGLMILAALIWCLWKAGFFKREFQKKEEEEFKRDSWDY
VPKLDKRESTS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccctcagcgggcagtgtgtctgcgtactgcagcctggtcctggtcctggttcag
gtcctggtcctggttcatcctgcggcaggatacagtctggatcaggaacacagtctggag
ttcagtggccccccctcttccatgtttggatactcagtcctgttgcatcgccatggagcc
cacagctggttggtggttggagccccagtagcgaactcatcctccagtccatcggttaga
tctccaggagctatttatcgctgcagcatcactgctgagtcccgccactgtcaccccatg
catcctgacgtgctgaactgtgggaagacgtgcgatgcagagagtgatcaccagtggctg
ggagtcagtctgtccagacaacctggagacaacggagggcacatcctggcgtgtgctcac
cgctggaagaacgtctactactcaaagaaagagggtcagaaccacaagctgcctaatgga
gtctgttatcgctatgccaacgacctcagacaccctcaacccatcatcccctgctacaga
gaccaccagaggaagtttggtgaggattatgggtcatgtcaggccggtatatccaacttc
ctgacagaggatctgatcatcatgggggctccggggacatcttattggacgggttcagtt
ctggtctttaacacgtccagtggagggatgtcagtgtacctggacgatgatgctggagcc
gtcagcttcggaagctacctgggttacgctgttggagcaggtcattttttgagtcccggt
actgtggaggtcttgggtggagctccacaatacaaccagaagggcaaggtcttcatcttt
gtagtagacaacaacatgctgcgggttgtctctgaagtgtccggaaaagagctgggatct
tactttgggtccagtgtgtgtgcggtggatctgaacgctgatggtttgtcagatctcttg
gtgggtgctcccatggcaacaggcattactagggaggagggaagagtccatgtgtacatc
aaccaggggcaggcgaagctgttggaggcggggtttcagttgattggcagcgatgcctat
gctgcccggtttggagagaccatcgccaacctgggagacctggacgacgatggttaccct
gatgtggcggttggtgccccacaggaggatgacctaaaaggagctgtctacatttacaac
ggcagaaaggagggcatctcaccaactccatctcagaggattactgggtccaccctgggt
cgcgacctcaggatgttcggccagtcgctgagctctggcattgacatcgatgacaacggc
taccaggatgtggcggttggtgcattcctctcggactcggccgtggttctcaggacccgt
ccagtgatccaggtgaaggcgtctgtggctctgcccgagcagattgaccaacgggtggca
ctgtgccgagaacacaagactccaactgtctgcttaaatgttaccgtctgcttcagtgtt
aggtccagacagttcagaggagccatagatcttcaatataatttgacctctgacctcctg
cataaaccatccttccctcatcgattctatttccacggtaacgggtcatccaatagcacg
agaggacgtgtgaaagcacgacatggccaggtcacttgtgcaacacatgtggcttaccaa
aggaaagatgtgagggacatttttactccggtcaagtttgaggtttcctacaatcacaga
gaaacaaacacacacaaagcctcttccaaaaccttccctccattaaaacccattctgcag
cagagcgcaggacaccagaacaccatcaccaaccagacttggtttgctcgctcctgttca
ctggtgaactgttcgaccaacatgcagctgtcagctcaactagtgctgccagatcagcag
cagtactttgctcttggctctggacagaccatcatgttaaaaacatcgctactgaactct
ggagatgacgccttcctgccgcgactgacgctgcgtttccccaacaacatccactacatt
aaagtactgcagagccaggacaacatgatcagttgtgatgtcacacaggaggtcaacagc
tcaacggcaggtgttgactgcagcgtcaccagcctcctcctctcagcccacgcccagttg
aatatcagctttctgttagacgtcaaccagaacagcacacctggtgacatcatcattcac
gtcaacaccagcagtgataactatgagaaggaggagtatctccatgacaactccatcagt
ctcctccttcctcttaaatatggagtcaacgtcaacatccacggttttgtgactcccacc
tcatttgtgtttggagatgaagacaatattccagttgactgctacgctgaaacattcaac
tacacatacaaggtgttaaactctggtcctagcaggtctctagatactgtggtagatatc
agcctaccgaagatcctcacaccttaccgacacagactgctgcaggtggtcgactggcag
tcgtctcagggtatgtgttcgatcagtgacacaactgtttcagttatcgaggactgtgat
gtctctgaagcttccttcatccaaaagctcgtcttcttcttctcctccacctccacccgc
agaatgttttgtggacgtggtgatgagctgtgtgagcggttggagtgtcgtctcggtaac
ctggaggcggggagagatgccttcatccaactagagatcagactgaatcctgctgtacta
ctgcaagctccgggtcgtcatggtgtcatgaagttggagagcacagcaatgatgtcaaat
cccagagaaagtcctcataccatcctcatctccgaacaacctgtagcagaggtggtggtg
gaagctctttttacccagaaaccctcaacaacagtaaaagtcttcatcatcgttgtcagt
ttagttttgggtctgatgatcctggctgctctcatctggtgtctgtggaaggctggtttc
tttaagagggagttccagaagaaggaggaagaggagttcaagagagatagctgggactat
gttccaaaacttgacaaaagagagagtacttcctaa
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integrated database retrieval system