Sander lucioperca (pikeperch): 116037995
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Entry
116037995 CDS
T07345
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluc03021
]
116037995 (chd1)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116037995 (chd1)
Transcription machinery [BR:
sluc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116037995 (chd1)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116037995 (chd1)
SLIK complex
116037995 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
CHDCT2
Motif
Other DBs
NCBI-GeneID:
116037995
NCBI-ProteinID:
XP_031138030
Ensembl:
ENSSLUG00000012190
LinkDB
All DBs
Position
14:complement(6730249..6764691)
Genome browser
AA seq
1771 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSASGSSSSSSSSSSQSGSSDSGSGSDS
GSASDSDTEKSKQKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQQLQQKRQSSSNS
GSDEDSSSSDGSDSSSGSKKRRNSGSSDSGSGSGSGSGSGSDSSAEDNSDETASDYEPSH
KIKSRKPPTKMNFRNGKKSSNQKKKSQKCSSSDDEDENYKKAASAGPRRQATVNVSYKED
EELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDCRIGRKRATGSITTVYAVEADGDPNV
NFNPNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKESEKKRWLKA
ASPEDIEYFNCQQEMMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLPYSECSWED
GALIGKKFQKCIDDYMCRNQSKTIPSRDCKVLKQRPRFVPMKKQPAYIGGDGLELRDYQL
DSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLTSWQ
REIQLWAPLMNVVVYLGDISSRNMIRTHEWMHVHNKRLKLNIILTTYEILLKDKSFLGSV
NWAFIGVDEAHRLKNDDSLLYKTMMDFKSNHRLLITGTPLQNSLKELWSLLHFIMPEKFH
SWELFEEAHGKGRDSGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEMSAIQKQYY
KWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFFSRAEALQQLVRC
SGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILADYLKGRQFLFQRLDGSIKGEMRKQA
LDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKRQ
VNIYRLVTKSSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSAPFNKEELS
SILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQFKVANFSM
MDEEEIDIDSERSLRSWDDIIPEEQRKRMEEEEKQKELEEIYLLPRMRNCAKQISFNASQ
GRQSRNRRYSGSESDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSYKKFGGPLE
RLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKTSGGRRGKVKGPTFRIS
GVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIEWGKEDDSSLLIGI
YEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDLAKKEAQKQ
AGTANSRKRKPRSKKSKTLKPAKTEEVLKSTSSDPPSDKRSDDEDEIEEEKEAVPVKTAS
RRGRADRAALKEEDEDEEPEQEEVSSSGEGEIKEKEIKKEKEESWDIKETKETKEKKETK
PLEAVHKQDESMEKNEVKTEVRTKKVSDVPVHITASGENVPLSEESEELDQRTFSVCKER
MRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYSNPEQIKQWRKNLWI
FVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQNTRSINPHGYKHADIERLKDNSHQDDS
SRDSYSSDRRYHESSGSKERHSSESHRKTTGGESRKRPYSFSNGKDHRDRDHYRPDSRDR
DRDRDRQDRYYNDGKHRKLEEFRSSRDHSHSDHRSSYRYHSDWQASASGPRSPRDQRSPY
DSRSPLGHRSPFDYSSDHKSTPEQIWSSRKT
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgaagcgaggatgaaagtgtaagcaacagtagcggagaatcaagtaattct
gatgatgaatccggttctggatccggctctgcatcagggtccgcctcaggctccagttcc
agctcctcgagcagcagcagccaatcagggagcagcgactcaggtagtggctcagactct
ggcagcgcgtcagactctgacacagagaagtccaagcagaagatggaaccgccaaacaag
tccaacatagatggagctgagttctggaagtccaacccaagtatccttgcagtgcaaaga
tctgctatgctcaggaaacagcagcagctgcagcaaaagagacaaagctcctcaaatagt
ggatcggatgaggactcgtcaagtagcgatggatccgactcatcaagtggatccaaaaag
agaagaaattcaggctcctctgactctgggtcgggctctggatctgggagtggttctgga
tcagactcctcagcggaggacaacagtgacgaaacggcatcagactacgagcctagtcac
aaaatcaaaagcagaaagcctccaaccaagatgaattttcggaatgggaagaaaagcagc
aaccagaagaagaaatcccagaagtgttcctcttctgatgatgaggatgagaactacaag
aaggcggcgtctgcggggccacggcggcaggccaccgtcaacgtcagctacaaggaggac
gaggagctgaagacggattcagacgacctggtggaggtcctgggtgaagatgtcccgcag
cctgaggaagatgagtttgaaacactggagagagtgatggactgcaggataggaaggaaa
agagcaacaggaagtataaccactgtatacgctgtagaagcagacggggaccccaatgtc
aacttcaatcccaacaaagaggctggtgatatccagtatctgataaagtggaagaactgg
gcccatatccacaacacttgggagacagaggagacacttaagttacagaacgtcaagggc
atgaagaaactggataatttcaagaagaaggaatcggagaaaaagagatggttaaaggcg
gcctcaccagaggatatagagtatttcaactgtcagcaagaaatgatggatgacctgcac
tctcagtaccagcttgttgagcgaatcataggacattcgaatcagaagtcagctgctggt
tacccagactacctgtgcaagtggcagggtctgccatactcagagtgtagctgggaagat
ggtgctctgatcggcaaaaagttccagaaatgcatcgacgactacatgtgcagaaaccag
tccaagaccattccatccagagactgcaaggtgctcaaacagagacccaggtttgtgcct
atgaagaagcagccagcgtacataggaggggatggactggagctccgagactaccagttg
gacagtttgaactggatggcccactcctggtgcaaaggcaacagttgcatcctcgctgac
gagatgggtttagggaagaccatccagacaattagcttcctcaactacctgtttcatgag
caccaactgtatggacccttcttgctggttgtgcctctctctacactaacctcctggcag
agagaaatccagctctgggcccctctgatgaatgttgtggtctacctgggagacatcagc
agcaggaacatgatcaggacacacgagtggatgcatgtccacaacaagagactgaaactt
aacatcatcctcacaacatatgagattcttctcaaagacaagtcatttttaggcagtgtt
aactgggccttcattggtgtggatgaggcgcaccgactgaagaatgatgactccctcctc
tacaagaccatgatggacttcaagtccaatcacaggcttctgatcacaggaacgccactg
cagaactccctgaaagagctctggtccttgctgcacttcattatgcccgagaagtttcac
tcttgggagctgtttgaggaggcacatggtaaaggcagggactcaggctacgccagcctg
cacaaagagctggaaccttttttactgcgccgagtcaagaaggatgtggagaaatctctt
cctgccaaagtggagcagatcctcagagtggagatgagtgctatccagaaacagtattac
aaatggatcctgaccaggaactacaaggctctgagcaaaggtaccaaaggcagcacgtcg
ggcttcctgaacatcatgatggagctgaagaagtgttgtaaccactgttaccttatcaag
cccccagaggacaacgagttcttcagcagagcagaagccttgcagcaactggtccgctgc
agtgggaagctagttcttttggacaaactgctggtgcgtttaaaggagcgaggccacaga
gttctcatcttctcccagatggtacggatgctggatatcctggccgattacctgaagggc
cgacagttcctctttcagagattagatggctccatcaaaggggagatgaggaagcaggcg
ttggatcattttaatgccgagggctcagaggatttctgcttcttgttatcgacgcgtgcg
ggcggtctgggtatcaatctggcatcagctgacacagtagtcatctttgactcggactgg
aacccccagaatgatctccaggcccaggccagagcccacaggatcggacagaaaagacag
gtgaatatctaccgtctggtgacaaagagctcagtggaggaggaaatcattgagagggcc
aaaaagaaaatggtgctggaccaccttgtcattcagaggatggacactacagggaaaact
gtcctccatacgggttctgctccttccagttcagcaccattcaacaaggaggagctgtct
tccatcctcaagtttggtgccgaggagctttttaaagagccagagggcgaggagcaggag
cctcaggaaatggatattgatgagatcctcaaaagagctgagaccagggagaatgaccct
ggaccctccacagtgggggaagaactgctgtctcagttcaaggtagccaacttctctatg
atggatgaggaggaaatagacattgactcggagcgtagtctgcggagttgggacgacatc
attcctgaggagcagaggaagaggatggaggaggaggagaaacagaaggagctagaggaa
atctacttgctgccacgcatgaggaattgtgccaaacagatcagctttaacgccagtcag
ggccggcagagcaggaacaggaggtactctgggtctgagagcgactccccctcagaccgg
aaaaggccaaagaaacgaggacggcctcggactattccgcgggaaaatatcaagggcttc
agcgatgctgagatccggaggtttgtcaagagttacaaaaaatttggaggaccacttgaa
aggttggacgctattgcgcgtgatgccgaactcgtggataagtctgaacatgacctgaaa
cgcctggcagagacggttcacaacggctgtgtgagaacactacgagaaaacccctgcgga
ccagagaaaacgtcagggggaagaagagggaaggtaaagggccccacgttcaggatctct
ggagttcaggtgaacgccaagctggttatctcccatgaggaagagctggccccactccac
aaggctattcctgctgacccagaggagagaaagaagtatatgattccatgccactcgaag
gcagcacactttgacattgagtgggggaaggaggacgactccagcctcctcataggaatc
tatgagtacggttacggcagctgggagatgatcaagatggatccagacctcaacctcact
cacaagctcctaccagacgacccagacaagaagccccaagccaaacagctccagacccga
gcagactacctcatcaagttgctaagcaaggacctggccaaaaaagaagcacagaaacaa
gcagggacagccaactcacggaagaggaaaccaagaagtaaaaagagcaaaactctgaag
ccagcgaagaccgaagaggtgctgaagagcacgtcctccgatcccccatcggacaagagg
tcagacgatgaagacgaaattgaggaggaaaaggaggcggtgccggtgaagacagcgagc
agacggggccgagcggacagggcggcgctgaaggaggaggacgaagacgaggagcctgag
caggaggaagtttcttcatcaggggagggggagattaaagaaaaagagatcaaaaaagag
aaagaggaaagttgggatatcaaagaaacaaaggagacaaaagagaaaaaagaaacaaag
cctctggaagcagtacataaacaggacgagagcatggaaaagaatgaagtaaagactgag
gtacgaaccaagaaagtctctgatgtgccggtccatattacagcaagtggagagaatgtg
ccattatctgaggagtctgaggaactggaccagaggaccttcagtgtgtgtaaagagagg
atgcggccggtgaaagcagccctgaagcagctggacaggccggagaaagggctgtcggag
cgcgagcagctggaacacaccagacagtgtctcataaagatcggagaccacatcaccgag
tgtctgaaggagtattcaaaccctgaacagatcaaacagtggagaaaaaacctgtggata
tttgtttccaaattcactgagtttgacgccaggaaactacataaactctataagcatgca
atcaagaaaagacaagagaacgcccaggcgatggagcagaacacaagaagtataaacccc
cacggctataagcatgcagatattgaaaggctgaaggacaactctcaccaggacgacagc
agcagggacagctacagctcggaccggcgataccatgagagcagcggcagcaaggagaga
cacagctcggagtcccacaggaagaccacaggaggggagtcccggaaacggccgtactcc
ttcagcaacggcaaagaccaccgagacagagaccactacagaccagacagcagggacagg
gacagagacagagacagacaggacagatactacaatgacggtaagcacaggaagctggaa
gagttccgctccagcagagaccattcccactcggaccaccgctcgtcctaccgctaccac
tcagactggcaggcctcggccagcgggccccgctcaccccgggaccagcgctcgccctac
gactcgcgctcgcccctgggacaccgctcgcctttcgactactcgtcggaccacaagagc
acaccggagcagatctggagcagccgcaagacataa
DBGET
integrated database retrieval system
