Sander lucioperca (pikeperch): 116038134
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Entry
116038134 CDS
T07345
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116038134 (sox2)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116038134 (sox2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116038134
NCBI-ProteinID:
XP_031138197
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All DBs
Position
11:19472664..19474755
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AA seq
320 aa
AA seq
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MYNMMETELKPPAPQTNTGGSGNTNTSGTGPNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGLLSPGGNGMGAGVGVGGGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLSY
QHPGLNAHNPSQMQSMHRYDMSALQYNSMTSSQSYMNGSPTYSMSYSQQTTPGMTALGSM
GPSSVVKSESSSSSPPVVTSSSHRAGPGCQSGDLRDMISMYLPGAEVSDQTAQTRLHMSG
HYQSTVPGTTINGTLPLTHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
tcgggcaacaccaacacgtctggcaccggccccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtcccggggccagaggaggaagatggcccaa
gaaaatcccaaaatgcacaactcggagataagcaagagactgggcgcagagtggaaactt
ctgtcggaaagcgagaagagacctttcatcgacgaagctaagaggctccgggccctgcac
atgaaggagcatccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccttgcccggcgggctgctgtctcccggagggaacgggatgggagct
ggggtcggggtggggggcgggctgggcggtggggtgaaccagcggatggacagctacgcg
gcgcacatgaacggctggaccaacggtggctacggcatgatgcaagaccagctgagctac
cagcacccggggctgaacgcgcacaacccgagccagatgcagtccatgcaccgctatgac
atgagcgccctgcagtacaacagcatgaccagctcccaaagctacatgaacggctccccg
acatactccatgtcctattcccagcaaaccacgccggggatgaccgccctgggctccatg
gggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtcacctcg
tcttcccaccgggccgggccgggctgccaaagcggagatctgagagacatgatcagcatg
tacctgcccggggcggaggtcagcgatcagaccgcccagacccggctacacatgtccggg
cactaccagagcaccgtgcccgggacgacgatcaacggcactctgccgttaacacacatg
taa
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