Sander lucioperca (pikeperch): 116038367
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Entry
116038367 CDS
T07345
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7
KO
K09447
interferon regulatory factor 7
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04620
Toll-like receptor signaling pathway
sluc04621
NOD-like receptor signaling pathway
sluc04622
RIG-I-like receptor signaling pathway
sluc04623
Cytosolic DNA-sensing pathway
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
116038367 (irf7)
04621 NOD-like receptor signaling pathway
116038367 (irf7)
04622 RIG-I-like receptor signaling pathway
116038367 (irf7)
04623 Cytosolic DNA-sensing pathway
116038367 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116038367 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116038367 (irf7)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
116038367 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
116038367
NCBI-ProteinID:
XP_031138569
Ensembl:
ENSSLUG00000024072
LinkDB
All DBs
Position
7:complement(3694743..3699882)
Genome browser
AA seq
436 aa
AA seq
DB search
MQSPPKPQFSSWLIEQVETGQYTGLRYVGQNKFRVPWKHNSRRDCNDEDTKIFRAWAIAS
GKINEFPNDKARWKTNFRCALNNLSVRFKMIKDNSKNHENSDDPHKIYEIINTEHNYESQ
PTQDSQEDPVIYSSPIEYFPSGNEHNLLNNFMALDLGNQPSEEQQWAEDYGQHNPALAKS
YPVAAENPPQLLPDQPSYCEVNPPPVLSSPLQPSIFDLEISIHYRKSEMLKMTLSTSLLQ
LHYQQESHEFNAYHLCFPSTDGLLDHKQIEYTNRILNSIQRGLFLEVRDTGIYAWRQDRC
HVFASTSDPSVAHPDPSKLPQNTMVQLLSFEKYVYELKQFKENNGGSPDYTINMCFGEKF
PDGKPLEKKLIIVKVVPLICRHFHEMAQMEGASSLHSANVSLQISHNSLYDLISSVFGLP
ADEEPARAAVPFLPQM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagccctcccaagcctcagttttccagctggctcatagagcaggtggagacaggc
cagtacacgggcctgcgctatgtgggccaaaacaagttcagagtcccctggaagcacaac
tccaggagagactgcaatgacgaggacactaaaatattccgggcatgggcaatagcaagt
ggaaagatcaacgagttccccaacgacaaggccaggtggaaaaccaacttccgatgtgct
ctgaacaacctctctgtgcgcttcaagatgattaaggataattccaagaatcatgagaat
tctgacgaccctcataaaatctatgagattatcaacactgagcacaactatgaaagtcag
ccaacacaagactcccaggaggatcctgtcatctacagctctcctatagagtacttcccc
tcaggaaatgagcataatctgcttaacaactttatggctttggatcttggcaaccagcca
tcagaggagcaacagtgggcagaggactatggtcagcacaatccagctcttgctaaaagc
tatcctgtagcagccgagaaccccccacagcttttaccagatcagccttcttactgtgaa
gtaaatcctccaccagtcctcagttcacctctgcagccaagtatatttgatctggagatc
tccatccactacaggaaaagtgaaatgctaaagatgacgttgtccacttcccttctccag
ctccactaccagcaggagtcccatgagttcaacgcctatcatctgtgctttccctccacg
gatggtctgctggaccacaaacagattgagtacaccaaccgcatccttaacagcatccag
agaggtctgttcctggaggtccgggacactggtatctatgcctggaggcaggaccggtgc
catgtgtttgccagcaccagtgaccccagtgtggctcacccagacccaagcaagctgccc
cagaacaccatggtgcagctcctcagctttgagaagtatgtttatgaactgaagcagttc
aaagagaacaatggtggctcccctgactacaccatcaacatgtgctttggagagaagttt
cctgacggaaaacctttggagaagaagctcatcatagtcaaggttgtccctctgatctgt
cgacactttcatgagatggcccagatggagggggcttcatctcttcacagcgccaacgtc
agtctccagatctcacacaacagcctctatgatcttattagctctgtctttggtctgccg
gcagatgaagagccagcacgggctgctgtgccttttctacctcagatgtga
DBGET
integrated database retrieval system