Sander lucioperca (pikeperch): 116038486
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Entry
116038486 CDS
T07345
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
116038486 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116038486 (myo5c)
04131 Membrane trafficking [BR:
sluc04131
]
116038486 (myo5c)
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116038486 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sluc04812
]
116038486 (myo5c)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
116038486 (myo5c)
mRNA cycle factors
P-body specific factors
116038486 (myo5c)
Membrane trafficking [BR:
sluc04131
]
Others
Actin-binding proteins
Myosins
116038486 (myo5c)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
116038486 (myo5c)
Cytoskeleton proteins [BR:
sluc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
116038486 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
AAA_22
AAA_16
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
116038486
NCBI-ProteinID:
XP_031138799
Ensembl:
ENSSLUG00000009056
LinkDB
All DBs
Position
7:9852297..9862452
Genome browser
AA seq
1741 aa
AA seq
DB search
MALLELYTEYNRVWIPDAEHVWKSAEIMRDFHFGNNVLQLLLEDGTEYCYPVDPSKPQLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLHIYG
DAVIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQADNERNYHIFYQMCSCAHLQEFKNLRLLSADKFWYTCMGGEITIEGVD
DQKDMEETRRTFSLLGLKEDFQSDVFQVLAAILHLGNVEIRNSGDGKSSVPPNDPHLAVF
CELLGASADGLGRWLCHRRIVLVAETVVKPVPKERAVNARDALAKQIYAHLFDCIINRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLDANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDTLYEELVDIMRVSKFSFLANFFQEEKSNVTT
KGVKVRPARPAVKPANKQLRTSVGDKFCSSLSLLMETLNATTPHYVRCIKPNDEKLPFEY
DSRRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHQEGDLSDKKQTCKNVL
QRLIQDPNQYKFGRTKIFFRAGQVAYLEKLRLDQLRGACVTIQKHVRGWRQRRKYLRMRD
AAIILQQYIRGQRTIRKTVSAATLKQGWAAMAVQRYWRGYRMRQIFQLVRLASITIQAFT
RGWMARKRYKKMVEEQKALILQKYARAWLARRRFQTMRRLVLNVQLSFRVQQLRKKIEEQ
NKENRGLMERLTSLANSHSQTVDRLQGLEAQLEKSTNQKASLEAREKKAKEDASLTTAQL
QKEIDALNFQKQNLENKFEASTKEAKESFDQIKRNLLEEKEYEARLRKIAENNIEIQRQD
HEKLVVTLKEEIKRLKEERVSLQRKMEDRGKLSSDLQEQVIQLTKHVKTIPELRRELNNL
QNQRNNMDRKMKQQSEQARAKMNDITRQLLGGVVEEEVLLGLTPNDSEKIYEVEDLLAAF
DGLQKATRILESHQREQKESYETQVEGLKLKVDHLQNENSKLQNLFQEKSNVNENIRQEV
SRLSSENSVLPELKLQVSELQRQKQELEAYIVEQSRELAEKTEEITNVLQRKIKEESSRR
SHFEEKAEELEELKRELQGRVEELEEENDHSKRQLLMESEAKSKLRQETSQLMAENMDFE
EQLDQKDRLIKKLQNKIKSLETSQKAKQTSAPAMPKDYLGMLEYKREDESRLIQNIILDL
KPKGVVVSVIPAMPAYILFMCVRHADYLNDEVKLKSLMTATIGAVKKVITSHHKDFEMLS
FWLSNTYQLLNCLKQYSGEEEFLKQNTPRQKKNCLQNFDLSEHRQILSDLAIQIYYRFLS
VIEKTLTPAIVPGMLEHESLQGISSMKPTGVRKRSNSIYEDSETYTISSILQQLSVFHST
MSQHGMEQGLIKQAVKQMFYLVGATTLNNIMLRKDMCSCRKGMQIRCNISYLEEWLKEKE
LQSSNAIDTLRPLSQAAWLLQVNKSTDEDAKEITEKCPELNPVQIVKILNSYTPIDEFEK
RVTSSFVRKVQSLLQDRDGSTQLMLDLDYRFQVTFPFCPSSQALELLQVPSSLHLGFLTR
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttgttggaactgtacaccgagtacaacagagtgtggataccagatgcagaacat
gtgtggaaatcagccgagattatgagagactttcattttgggaacaatgttcttcaattg
cttcttgaagatggcactgagtactgctaccctgttgacccgtcaaaaccacaactccct
ccacttcgcaacccggacatcttggtgggggagaacgacctcaccgctctcagctacctg
catgaacctgcagtcctgcacaatcttaaagtgcgatttgtggagtccagaatcatctac
acctactgtggtattatactggtagctgtaaatccatacaaacagcttcatatctatgga
gatgcagtcattcatgcatactcaggccagaacatgggagacatggaccctcatatattt
gcagtggctgaggaggcttacaaacagatggccagaaaccacaagaaccagtctatcatc
gtcagtggtgaatctggagccggcaaaacagtgtctgctcgatacgctatgaggtacttt
gctgttgtaagcaaatctggaagtaagactcgagttgaagacaaagtcctggcatccaat
ccgataacagaggcaataggaaacgcaaagaccaccaggaatgacaacagcagccgtttt
gggaaatacacagagatcagctttgacaggaggtaccggatcatcggagcgaacatgagg
acctatctcttagagaaatccagagttgtttttcaggcagacaacgagcgaaactatcac
atattctaccagatgtgttcctgtgctcatctgcaagagttcaagaatctaagactgttg
agtgcagataagttctggtacacctgcatgggcggtgagatcactattgaaggtgtagat
gaccagaaagacatggaggagactcgacggaccttctcactgctaggattgaaggaggac
tttcagtccgatgtgttccaagttttggcagccattctgcatttgggaaatgtggaaatc
cgaaactctggagatggcaaatcatcagttcctcccaatgatccacacctggcagtcttc
tgcgagttgctgggtgcgagcgcagacgggttggggcgttggctgtgccatcggaggatc
gtcctggtggctgagacggtggtgaagccggtgcccaaagaacgggcagtaaatgccaga
gatgccctagccaagcagatctatgcccatctgtttgactgtattattaacaggataaac
acagcacttcaggttccaggaaagcaacacgctttcattggtgttctggacatttatggc
tttgaaacgtttgacatcaacagctttgaacagttttgcatcaactacgcaaatgaaaag
cttcaacagcagttcaacttgcatgtgttcaagctggagcaagaggagtacatgaaagag
gacatcccatggacgttgatagatttctatgacaaccagccggtcattgacctgattgaa
gccaaaatggggatcctggacttgcttgatgaagaatgtttgtttcctcagggcactgat
caaagctggctgcaaaaactgttcaactatcttgatgccaatcctctgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcaatgc
agaggttttcttgaaaagaacagagacactctctatgaagaactggttgacattatgaga
gtcagtaagttttcttttctggccaactttttccaagaggagaaaagcaatgtgaccact
aaaggtgtcaaagtgaggcccgctagacctgcagtgaaaccggccaataaacagctgaga
acctcagtgggagataagttctgcagttccctctctctactgatggaaacactgaatgct
accacccctcactatgtacgctgcattaagcccaatgatgaaaagctcccatttgaatat
gattccaggagggtggtgcagcagctgcgagcctgtggagtccttgaaactattcgtatc
agtgcacagagctatccatccaggtggacatacattgagttttacagccgatacagtatc
ctaatgtcacaccaggaaggggacctcagtgacaagaaacagacctgcaagaatgtgctg
cagaggttgattcaggaccccaaccagtacaagtttggtcggactaagatcttcttccga
gctggtcaggtagcttatctcgagaagctgcgtctggatcaactgaggggagcctgcgtg
accatccagaaacatgtccgcgggtggaggcagaggaggaagtacctgcgcatgagagac
gcagccatcatcctccaacagtacatccgtggacagaggacaatccgtaaaacagtgagt
gctgcaacactgaaacagggctgggcagcaatggcggtccagagatactggagaggttac
cgcatgagacagatcttccagttagtccgtctggcctccatcaccatccaggccttcaca
cgaggttggatggcccgtaaacggtacaagaagatggtagaggagcagaaagccctgatt
ctacagaagtatgccagagcatggctggcacggcggcgttttcaaaccatgcgtcggctg
gtgctcaatgtacagctctccttcagggtgcagcagctcagaaagaagattgaagagcag
aacaaagagaaccgtggattgatggaaagactgacaagcttggccaactcccactctcaa
accgtggacagacttcagggtttggaggcacagctggaaaaatcaaccaaccagaaggcg
tctttggaggcaagagagaagaaagcgaaagaagatgctagcctgacaactgcacagctt
caaaaggaaatagatgcactgaactttcaaaagcagaacttggagaacaagtttgaagct
tccaccaaagaggccaaagaaagctttgatcaaataaagaggaaccttctggaagaaaaa
gaatatgaagccaggcttagaaaaattgcagagaacaacattgagatccagagacaggac
catgagaagttggtggtaactctaaaagaggagattaagagattgaaagaggagagagtc
agtctgcagagaaagatggaggacaggggcaagttgagctctgacctgcaggaacaggtc
atccagctcaccaaacatgtcaagaccattcccgagctacgcagggaactcaacaacctg
caaaaccagagaaataacatggaccgaaagatgaagcaacagtcggaacaagcaagagct
aaaatgaatgatattacgagacaacttcttggtggcgttgttgaagaggaggttcttttg
gggctaactccaaacgactctgagaagatttatgaagttgaagatttgctggcagcattt
gatggcctacagaaagctaccagaatcctagaaagccaccagagagagcagaaggagagc
tatgagacccaagtggagggtttgaaactgaaagtggatcaccttcaaaatgagaacagc
aagttgcaaaacctgttccaggagaaaagtaatgtcaatgagaatattcgccaagaagtg
tccaggctcagcagcgagaactcagttttaccggagctgaaactgcaggtctcagagctg
cagagacaaaaacaagaactggaggcttacatagtggagcagagcagagaactagcagaa
aaaactgaggagatcactaacgttcttcaaagaaagattaaagaagagagctcacgacgc
agtcactttgaggagaaagctgaagagctggaggagttgaagagggagcttcaaggcaga
gtagaggagctggaagaggagaatgatcactcaaaaagacagctgctgatggagagtgag
gccaagagcaaactgagacaggagacttcacagttaatggctgaaaatatggactttgaa
gagcagctcgaccagaaagatagattaataaagaaactacagaataaaataaagagcctt
gaaacatcacagaaagcgaagcaaacgtctgctcctgccatgcccaaagattaccttggc
atgttggagtacaagagagaggatgaatccaggctcattcaaaacatcattctggaccta
aagcccaaaggcgtggtggtcagtgtgatccctgcgatgccagcttacatcctcttcatg
tgtgtccgccacgctgactacttgaacgatgaagtcaaactcaagtctctaatgaccgcg
accatcggtgctgtcaaaaaggtcatcacgagtcaccacaaagactttgagatgctgtca
ttctggctctcaaacacgtatcagctgctcaactgtctgaagcagtacagcggggaggag
gagttcctgaaacaaaatactcctcgccaaaaaaagaactgcttgcagaattttgatttg
tctgaacacagacagattctcagcgacctggccattcaaatctactatcggtttctctcg
gtcattgaaaagaccctcactcctgcaattgtacccggtatgttggagcacgagagttta
caggggatttctagcatgaagccgacgggcgtcaggaagcgttccaacagcatctacgag
gactcagagacatacaccatctcctccatccttcagcagctcagtgtctttcactccacc
atgagccagcatggcatggagcagggcctcataaaacaggctgtcaagcaaatgttttac
ctagttggtgcgaccaccctcaacaacatcatgctccgcaaagatatgtgctcctgcagg
aagggaatgcaaatcaggtgtaacatcagttacctggaggaatggctgaaggagaaggaa
ctgcaaagctctaatgctatagacactctgaggccgttatctcaggctgcctggttactg
caagtcaacaagtccactgatgaagacgccaaggagatcactgaaaaatgccctgaactc
aaccccgttcagattgtcaagattttgaactcctacactcccattgatgagtttgagaaa
agggtgacgtcgtcatttgtccgcaaagttcagtcgttactacaagatcgtgacgggtcc
acacagttgatgctggacttagactatcgtttccaggtcacgtttcctttctgcccgtcc
tcacaggctctggagctgctgcaggtcccgagcagccttcatctgggtttcctaaccagg
atctga
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integrated database retrieval system
