Sander lucioperca (pikeperch): 116038701
Help
Entry
116038701 CDS
T07345
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116038701 (lrrc4ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF7617
Ig_6
Sp38
Syndecan
Motif
Other DBs
NCBI-GeneID:
116038701
NCBI-ProteinID:
XP_031139147
Ensembl:
ENSSLUG00000023823
LinkDB
All DBs
Position
7:4437775..4499313
Genome browser
AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRALSDPLFVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLAVIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTQHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELKCRASSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEGFTTAVQQKVGP
TPSAGTWESVSPTSTTTTTVRIPLSTRATEKTYTIPVTELGGEGSLNGLDEVMKTTKIII
GCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLPP
LEHEHLNHYNTYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttgtccgaccctttgtttgtggtgcttctggccctgcaactgctggtggtggca
gggctggtacgtgctcagacatgcccctctgtctgctcctgtagtaaccagttcagcaaa
gtcatctgcacccgacgaggtttgcgggaagtccctgatggcatctctaccaacacacgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcaccta
agacatctggagatcctgcagctgagcaaaaaccacatacgcaaaattgaactgggggcc
ttcaatggactggccagcctcaataccttggagctttttgataaccgcctcaccactatc
ccaaacggggcatttgagtacctgtccaaactaaaggagctttggctgaggaataacccc
atcgagagcattccctcctatgctttcaacagagtgccctcgttaaggcgtttggacctt
ggggagctcaaacggctctcctacatatctgagggggcctttgaagggctgagcaacctg
cgctacttaaatctgggaatgtgcaatctgaaggaaattcccaaccttattcccctggtg
aagctggatgaactggagatgtcggggaaccagctagctgtcatccgacctggctctttt
aaagggctcatccatttacagaagctatggatgatgcatgcccagatccagaccatagaa
aggaactcttttgatgacctgcagtcactagtggagctcaatctagcccataacaatctt
accctcttgccccatgatctcttcactcctttacatcacctggagagggtgcacttgcac
cacaacccatggaattgtaactgtgacatcctctggctaagctggtggcttaaggagatg
gtgccagcaaacaccagctgctgtgcccgctgcagctcaccaacccagcataagggacga
tacattggcgagttggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagacctaaatgtgacagagggaagcgctgcagagttgaaatgcagagccagctct
ttgacctctgtaagctggattacacccaatggttccatcatgacacacggtgcttacaag
atcagaatctctgtgctgaatgacggcactctgaacttcaccaatgttaccatgcaggac
acaggcacatacacatgtatggtcagtaattctgcaggtaacacaacagcatctgccaca
ctcaacgtgtcctctacagagaacagcagcttcagctactttaccacagtgacagtggag
accatagaaacgccacataatgaaggcttcaccaccgctgtacaacagaaggtgggcccc
acaccctctgctggtacatgggaatcggtttcacccacctctacaactaccaccacagtc
cggatcccgctctccacccgcgccacagagaagacttacacaatccccgtcacagagctg
ggtggggagggctcgctgaacggcttggatgaggtaatgaagacgaccaagatcatcatt
ggctgctttgttgcgatcacactcatggcagcggtcatgctaatcatcttctacaagatg
cgcaaacagcaccaccagcagaaccaccacgcacccacacgcaccattgagatcatcaat
gtggacgaggactgtgtaacaggaggcccgggcatggagggccacctgaccctgcctcct
cttgagcacgagcacctcaaccactataacacctataagactgcatacaaccatgcctcc
acgatcaactccatacacagctcagcgcacgaacctttgttaatccgcgccagctcaaaa
gacaatgtacaagagacccaaatctaa
DBGET
integrated database retrieval system
