Sander lucioperca (pikeperch): 116038900
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Entry
116038900 CDS
T07345
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116038900 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sluc01007
]
116038900 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116038900 (farsb)
Enzymes [BR:
sluc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
116038900 (farsb)
Amino acid related enzymes [BR:
sluc01007
]
Aminoacyl-tRNA synthetase
Class II (U)
116038900 (farsb)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116038900 (farsb)
Prokaryotic type
116038900 (farsb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
EF1_GNE
PhetRS_B1
B5
B3_4
EF-1_beta_acid
Arc1p_N_like
EAD7
Motif
Other DBs
NCBI-GeneID:
116038900
NCBI-ProteinID:
XP_031139462
Ensembl:
ENSSLUG00000023706
UniProt:
A0A8D0AMW8
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All DBs
Position
5:complement(44174718..44197830)
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AA seq
843 aa
AA seq
DB search
MPTVGVKRDLLFKALGKTYTDEEFDELCFEFGLELDEITSEREIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEAPRYRRVSPVSGEPQKLFITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQDKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKPPG
DISFKPLNQTKEYTATQLMSLYKTDSHLKHYLHIIEDKPVYPIIYDSNGVVLSMPPIING
DHSKITLKTKNVFVECTATDLTKAKIVLDMMVTMFSEYCSQPFTVEEAEVVYPDGKTCKY
PELAYRKEKLSSEFINQKVGINESTEKIAQLLTKMCLRSQATGVGDEIEVEIPPTRSDVI
HACDIMEDAAMAYGFNNVPHTTPRTYTVANQFPLNKLTELLRQDLAAAGFTEALNFALCS
EEDVADKLGKKISETRAVHISNPKTAEFQVARTTLLPGLLKTIASNRKMPLPLKLFEISD
VVLKDETKDVGARNSRRFCAVYYNKSPGFEVIHGLLDRTMELLEVKSARVDGYHIQAAED
STFFPGRCAEIFARGKSVGRLGVLHPDVINRFELTMPCSALEMDIEPFLGHTAETTLTHD
VPMQEVIEHKFPTQDESLQAPSSRPTSTKTAFGDVSTAAGLKSLNDFLADKSYIEGFAAS
QADMAMFDAIPSAPCSTFCHLMRWYNHIKSFQRERASLPSAKSQFVLPATTSDASDDDID
LFGSDDEAESAEADRIKEQRLAEYAAKKSKKPALVAKSSILLDVKPWDDETNMAELEQCV
RSVSMDGLLWGQSKLVPVGYGIKKLQIGCVVEDEKVGTDLLEEAITAFEDYVQSVDVAAF
NKI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtaaaaagggatcttctctttaaagctttgggcaaaacatacact
gatgaggagtttgatgagctgtgctttgaatttgggctggagctggatgaaattacctca
gagagggagataatcagccgagagcagggtgactccaaggcatcaggagcatctgacgtc
attctgtacaagattgatgttccagctaaccgctatgacctgctgtgtctggaggggctg
gtccgtggactgcaggtcttcaagaataagttggaggcacctcgctacagacgtgttagc
ccagtcagcggggagcctcagaagctgtttattactaaggagacggcggcagtgcgaccc
catgctgtggcagcagtgttgaggaacatcacctttacacaggagcgctatgacagcttc
atcgagctgcaggacaaactccaccaaaacatctgcaggaagaggagcctggtggccatc
gggacccatgacctggacaccatctctggtcctttcacatacacagccaagcctcccgga
gacatcagctttaaacccctcaaccagactaaagaatacactgccacccagctcatgagc
ctctacaagacagacagccacctgaagcattaccttcacattattgaagacaagcctgtg
taccccatcatctacgacagcaatggcgttgtcctgtccatgcctcccatcatcaacggt
gaccattcaaaaatcaccctaaagaccaagaacgtttttgttgagtgcacagccaccgac
ctgaccaaggcaaagatcgtgttggacatgatggtgaccatgttcagcgagtattgttca
cagcctttcacggtagaggaggctgaggtggtgtacccagacggcaagacctgcaaatac
ccagagctggcctacaggaaggagaagttgtccagtgagttcatcaaccaaaaagtgggc
atcaatgaatcaactgagaaaatagcccagctgctgaccaagatgtgtctgcgctcccag
gctacaggtgttggtgatgagatcgaggttgagatcccgcctacacggtcagacgtcatc
cacgcctgtgacatcatggaggacgccgccatggcctacggattcaacaatgtcccccac
accacaccacgcacctacaccgtagccaaccagtttccactgaataaactgacagagctg
ttgagacaagacctggcagctgctggattcacggaagccctcaactttgccctatgttct
gaagaagatgtagcagacaagcttgggaaaaagatctcagagaccagggcggttcatatc
tccaaccccaagacagctgagttccaggtggcgcgcaccaccttgttgccaggcctgctg
aaaaccatagcgtccaacaggaagatgccccttcccctcaaactgtttgagatatctgac
gtggtgctgaaggatgagaccaaagatgtcggggcgaggaacagccggcgtttctgtgct
gtttactacaacaagagtccgggcttcgaggtgatccatggcctgctggaccgaaccatg
gaactgctggaggtgaagtcggcccgcgtggacggctaccatatccaggctgcagaggat
tccacctttttccccggtcgctgcgcagagatctttgcccgtggaaagagcgtagggcgt
ctcggggtcctccacccggatgtcatcaaccgctttgagctgaccatgccctgctcggcc
ctggagatggacatcgagcccttccttggccacactgcagaaaccaccctcacacatgac
gtccccatgcaggaagtcatcgagcacaagttccccacgcaagacgaatccttgcaggcc
ccgtcatcccgtccaacttccacaaaaaccgcgtttggggacgtgagcacggcagccggc
cttaaatcgctcaatgattttctggcagacaaaagctacatagagggctttgcggcgtcc
caggctgacatggcaatgtttgacgccatcccctctgcgccctgctcgaccttctgtcac
ctcatgcgctggtataaccacatcaagtcttttcagagggaaagagccagcctcccgtca
gctaagagtcagtttgtcctcccagctacgacaagcgacgccagcgacgatgacattgac
ctatttggctcggacgacgaggccgagagcgccgaggcggatagaatcaaggagcagcgc
ctcgctgaatatgctgccaagaagtccaagaagccagctctcgtcgccaagtcctccatc
ctgctcgacgtcaaaccctgggacgacgagacgaacatggccgagctggagcagtgcgtc
cgcagcgtcagcatggacgggctgctgtgggggcagtccaagctggtcccagtgggctac
ggcatcaagaagctccagataggatgcgtggtggaggatgagaaagtgggcaccgatctg
ctggaggaagccatcaccgccttcgaggattatgttcagtctgtagatgtggctgccttc
aacaagatctga
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