Sander lucioperca (pikeperch): 116038945
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Entry
116038945 CDS
T07345
Name
(RefSeq) coatomer subunit beta' isoform X1
KO
K17302
coatomer subunit beta'
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116038945
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sluc04147
]
116038945
Membrane trafficking [BR:
sluc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
116038945
Exosome [BR:
sluc04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
116038945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT122_1st
ANAPC4_WD40
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
PEP5_VPS11_N
Beta-prop_LRRK2
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
HEAT_GCN1
Beta-prop_IP5PC_F
Clathrin
Motif
Other DBs
NCBI-GeneID:
116038945
NCBI-ProteinID:
XP_031139529
Ensembl:
ENSSLUG00000023150
UniProt:
A0A8D0ADS1
LinkDB
All DBs
Position
5:complement(43323953..43339781)
Genome browser
AA seq
1232 aa
AA seq
DB search
MPLRLDIKRKLTARSDRVKSVDLHPTEPWMVASLYSGTVVVWNHETQMMVKTFELCDLPV
RVAKFVARKHWVIAGADDMQIRVFNYNTLERVHMFEAHSDYIRCIVVHPTQPYILTSSDD
MLIKLWDWDRKWSCGQVFEGHTHYVMQIVINPKDNNQFASASLDRTVKVWQLGSKTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVTCVCFHPE
LPIILTGSEDGTVRVWHSNTYRLENTLNYSMERVWCICGQPGSNSVALGYDEGSIIIKLG
REEPAMSMDSSGKIIWAHHSEVQQANLKSMGETMGEIRDGERLSLGVKDMGSCEIFPQTI
QHSPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFVWAHDSSQYAIREGSSMVRIFKNF
KEKKAFKPDFGTEGIFGGFLLGVRSNSGLAFYDWESGELIRRIEIQPKHIFWSDSGELVC
IGTDESFFVLRYLPEKVAAAQESKEEITEDGIEGAFEVLGEVPEIVKTGVWVGDCFIYTS
SLNRLNYYVGGEIITIAHLDRTMYLLGYIPKDDRLYLGDKELNVISYSLLLSVLEYQTAV
MRRDFSTADKVLPTIPKEQRARVAHFLEKQGFRQQALAVTTDPEHKFELALQLGELKIAY
QLASEAESEQKWKQLAELATTKCQFSLAQECLHQAQDYGGLLLLATASGNVNMVGKLADG
AEKDGKTNVAFLTYFLQGRLDKCLDLLIETDRLPEAAFLARTYLPSHVSRVVKLWKESLS
KVNQKAADALADPSQYSNLFPGLQQALLAEEYLKETHVRVRPAAEYPLIMPNEDRDVLKE
SAAFVPKGEITKPEEVLKSINEIVTVAAVMEAAPAETAVVEEPIPLKQDIINPVSATEEE
SIPTAASSLPVTVTEEHVGAKQAKSVSFEADTIAKSEEASVSVEEDILESTTEIGPEEPE
MVQSSPVEDVSSSAETDVQDVSPATDAVPAACVSETYLIKTKSKTVMATEKTSSETVATK
NIATEDVQVSTVLIGDTDVRESIANEEMPVYEKLEEGIVSSAPTITDTAAEGTLVTEELV
AETAALPVTVEELISFETTASPVLDLPVRVQTFPDLALDPLLDPLEDTMPALKPVPAQEP
EQEERTKALPVKPEDNAEPAVPLQAEPEVLSPPAAPVEGKVAEEEADPEGAEELAEDLEA
EMNDEILDDLDLDNFDLEDIDTTDINLDEDFE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgcggttggacatcaagcggaagctgactgctcggtctgaccgagtgaagagt
gtggatctgcaccccactgagccctggatggtggctagcctctacagcggcactgtggtg
gtctggaaccatgagacacagatgatggtgaaaacctttgaactgtgtgacctgcctgtc
cgagtagccaagtttgtggccaggaaacactgggtcattgctggtgcagatgatatgcag
atccgagtgtttaattacaacactctggagcgagttcacatgtttgaggctcactctgac
tacatccgctgtatcgttgtccaccctacacagccctacatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggacagaaaatggtcgtgtggtcaagtgtttgaggga
cacactcactacgtcatgcagattgtcattaaccccaaagacaacaaccagtttgccagc
gcctctctggacagaactgttaaggtgtggcagctgggctccaagactcccaacttcact
ctggagggccatgagaagggggtgaactgcattgattactacagcggaggagacaagccc
tacctcatttcaggggccgatgaccgcctggtcaagatctgggattatcagaacaaaacc
tgtgttcagaccctggagggccacgcccagaatgtgacctgtgtctgtttccatcctgag
ctgccaatcatcctcacaggctctgaggatggcactgttcgagtttggcactccaacacc
taccgactggaaaacacactcaactatagcatggagagggtgtggtgtatatgtggccag
cctggctccaacagtgtggctttgggctatgatgaaggcagcatcatcatcaagctgggt
cgggaggagccagccatgtccatggactccagtgggaagatcatatgggctcaccactct
gaagtgcagcaggccaacctgaagtccatgggggagaccatgggtgagatcagagatgga
gagcggctgtcgctgggtgttaaagacatgggcagctgtgagatcttcccccagaccatc
caacacagccctaacgggagatttgtagtggtgtgcggagatggggagtatatcatctac
actgccatggccctgaggaacaagagctttggctcagctcaagagtttgtctgggcccat
gattcttcacagtatgccataagggaaggcagcagtatggtcagaatatttaagaacttc
aaagagaagaaggcttttaaacctgactttgggactgaaggtatctttggtggcttctta
ctgggcgtgaggtcaaacagtggcttggctttctacgactgggagagtggtgaactgatc
cgccgtatcgagatccaacctaaacatatcttctggtccgactctggggagcttgtgtgt
atcggtacagatgagtctttctttgtgctgcgctacctaccagagaaagtggcagcggcc
caggagtccaaggaagagataacagaggatgggatagaaggcgcctttgaggtgctgggg
gaggtgccagagatagtgaagacaggggtttgggtgggagactgcttcatctacaccagc
tctctcaacagactaaactactatgttggaggagagatcatcaccattgctcacctcgac
aggaccatgtatctgctgggctacatccccaaggacgatcgtctctacctcggagacaag
gagctgaatgtcatcagctactccctgctgctgtcagtgctggagtaccagacagctgtc
atgaggagggacttcagcacggccgacaaggttctacccacaatccccaaggagcagagg
gccagggtagcccactttttggagaaacagggctttagacagcaggccctggctgtgacc
actgacccagaacacaagtttgaactggccctgcagctgggagagctcaagatagcctac
caactggcctcagaggcagagtcagagcagaaatggaagcagctggcagagctcgctact
acaaagtgccagtttagcttggctcaggagtgtctgcaccaagctcaggattatggggga
ttattgctgttggccaccgcctcgggcaacgtcaacatggtgggaaaattggccgatggg
gcagagaaggatgggaagaccaatgtggcctttctcacctacttcctgcagggaagattg
gacaaatgtctggaccttctcatcgaaacagatcggttgccagaggcagcatttctggca
agaacatatctgcccagccatgtgtcaagggtggtgaagctgtggaaggagagtctgtcc
aaggttaaccagaaggcagcagatgctctggctgacccctcccagtatagcaacctgttc
cccggcctccagcaagccctgctggctgaggagtacctgaaggagactcatgtcagggtc
aggcctgctgcagaatacccactcatcatgccaaatgaggaccgcgatgtcctgaaggaa
tctgcagcttttgtgcccaaaggagagatcactaagccagaggaagtgttgaagagcata
aatgaaatcgtcacggtagcagcagtgatggaggctgcacctgcagaaaccgcagtagtg
gaggaacccattccactaaaacaggatataattaatcctgtttcagcaacagaagaagaa
tccatcccaacagcagcatcctctctgcctgtcacagtaacagaagagcatgttggagca
aagcaagcaaaatctgtgtcttttgaggcggacaccatcgctaaatcagaggaggcttca
gtctctgtagaggaagacattttggagtccaccacagagattggccccgaagagccagag
atggttcaatccagtcccgtggaagatgtcagctcatcagctgagacagatgttcaggac
gtttctccagcaactgatgctgtgcctgctgcctgtgtatctgaaacatatctaatcaag
acgaaatccaaaaccgtcatggcgacagaaaaaacatcaagtgagacagtggcgacaaaa
aacatagcaacagaggatgtccaagtcagcactgttctgataggtgatacagatgtaaga
gaatctatagcaaatgaagaaatgcctgtgtatgaaaaactggaagaaggtattgtctcc
tcagcaccaaccatcacagatacagcagcagaagggactcttgttactgaggaacttgtt
gcagaaacagcagcactacccgtcacagtagaggagctcatctcctttgaaaccacagcc
agtccagtgctggatctgcctgttcgagtccaaacttttccagatttggcccttgatcca
ctgctagacccactcgaagatacaatgccagcattgaagccagtcccagcacaagaacca
gaacaagaggaacgcaccaaagcactcccagtaaagccagaggacaacgcggagcctgct
gtgcctctgcaggctgagccagaggttttatccccaccggcagctcccgtagaggggaag
gtagcggaggaggaggcagatcctgagggagctgaggaacttgcagaggacctcgaggca
gagatgaatgatgagatcctggatgatctggatctggacaattttgacctagaagatatc
gacaccacagatatcaacctggatgaggattttgagtga
DBGET
integrated database retrieval system
