Sander lucioperca (pikeperch): 116039127
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Entry
116039127 CDS
T07345
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04110
Cell cycle
sluc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116039127 (smc1a)
04114 Oocyte meiosis
116039127 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116039127 (smc1a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
116039127 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
116039127 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
116039127
NCBI-ProteinID:
XP_031139793
Ensembl:
ENSSLUG00000002937
LinkDB
All DBs
Position
12:complement(38129376..38141682)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRVIIGSSSEYRINNKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYERRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMKAVELAKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEMAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREITDLRDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLHSGTMDDISQGEGSSQTE
ESSSQRTSSSVLAKEALIEIDYSNLSEDLKDVLSEEEIKAETNTLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaactgatagagatcgaaaacttcaagtcgtataaaggaagacagatc
attggaccttttcataagttcactgcaatcatcggacccaatggatctggaaaatccaac
cttatggatgccatcagcttcgtgttggcggagaagaccagcaacctgcgtgtgaagact
ctgaaagatctaatccatggagcacctgtagggaaaccagctgccaacagagcctttgtc
agcatggtgtatcaggaggataacggagaggaacgctccttcacaagggtcattattggt
tcctcctctgagtaccgcatcaacaacaaggtggtaggcctccctgaatacagtgaagag
ctggaaaaacttggcattttgatcaaggctaggaacttcctggtttttcagggagctgtg
gagtctattgccatgaagaaccccaaggagcggacagctctgtttgaggaaatctcacgt
tctggagagctggcccaggagtacgaacgcaggaagaaggaaatggtgaaagcagaggag
gacacacagttcaattaccatcgtaagaaaaacattgctgctgagcgcaaagaagccaag
caagagaaggaggaggctgagcggtaccagcgtctgaaagacgaagtggccagggctagt
gttcagttgcagctcttcaagctgtaccacaatgagactgagattgagaagctgaataaa
gagctgggccagcggaacaaggagatcgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctgggcaggctgatgagggagcagcagactatt
gagaaagaaatcaaagagaaagactctgagttgaaccaaaagaggccgcagtacatcaag
gccaaagagaacacctcacacaagatcaagaagctcgaggctgcacgcaagtcattgcaa
aatgcccagaagatgtacaagaaacgcaagggggacatggatgagcttgataaagagatg
aaggcggtggagttggccaagcaagagtttgaggagcgcatggaggaggaggcacagagc
cagggccaagacctgaccctggaggaaaaccaggtcaagcagtaccatcgtctaaaggag
gaggccagtaaacgtgctgccaccctggcacaggagctggagaagttcaaccgcgaccag
aaggccgaccaggaccgcctggacttggaggagaggaagaaagtggagacagaggccaaa
atcaaacaaaagatccgtgaaattgaggaaaaccagaaacgcattgagaaattagaggat
tacattaccaccagcaggcagtcactggatgagcagaagcgcatggaggaggagctgact
gaggaggtggagatggccaagaggagaatcgatgagatcaacacggagcttaaccaggta
atggagcagctgggagacgctagaatcgacaggcaggagaacagtcgccagcagcgcaag
gctgagatcatggagagtatcaaaagactctaccctggctctgtgtatggtcgtctaatc
gacctgtgccagcccactcagaagaagtatcagattgctgtgaccaaagtgttgggcaaa
aacatggacgccatcattgttgactcagagaagactggcagagattgtattcaatacatc
aaggagcagagaggagagcccgagaccttccttcctctcgactacctcgaggtgaaacca
acagatgagaaactgagggaactgcgaggagccaaactggtgattgatgtgattcgctat
gagcctcctcacatcaagaaagccctccagtatgcatgtggcaacgccctggtctgtgag
aacgtagaggatgcacgaaggattgcttttggagggccatacagacacaagacggtagcc
ctggacggtactctgttccagaagtctggagtcatctctggaggagccagcgacctgaag
gccaaggccaggcgctgggatgagaaggcagtggacaagcttaaggagaagaaagaaaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctgcgtcag
gtgcagtctcaggcccacggtctgcagatgagactcaagtactcccagagtgatctggaa
cagacaaaaacccgtcacctctccctcaacatgcaggagaagtctaagctagagagtgaa
ttggcaaactttggccctcgcatcaacgacatcaagaggatcatccagtcccgtgagagg
gagatcaccgacctgcgagaccgcatgaacctggtggaggatgaggtgttcattgagttc
tgtaaggagattggagtgaggaacatcagagagtttgaggaggagaaggtgaagaggcag
aatgagattgcaaagaagcgtctagagtttgagacccagaagacccgcctgggtatccag
gtagactatgagaagaatcagctgaaggaggaccaggagaaagtcatgatgtgggagcag
accgtcaagaaggacgaggctgaaatagagcgactaaagaaggaagagcacagacacatg
aagatcattgatgagacaatggcccaactgcaggacctgaagaaccagcacctcaccaag
aaatctgaagtcaatgataagaaccatgatatggaggagatccgcaaaaaactgggtggc
gccaacaaggagttgactcagctccagaaggaggtcacggccattgagaccaaactggag
cagaagcgcagtgaccgtcacaacttgttacaagcctgcaaaatgcaggacattaggttg
cctcttcattctggaacaatggatgatatcagccagggagaggggagctcccagacagag
gagtccagcagccagaggacgtccagcagtgttctcgctaaagaggctctcatagagatc
gactacagcaacctgtctgaagaccttaaggatgtactgtcagaggaagagatcaaggcg
gagacgaacacgctgcagcagcgtctgaacgagcagcagagtatccttcagaggatcagc
gcacccaacatgaaggccatggagaaactcgagagtgtcagggacaagttccaagagacc
agtgacgagtttgaggctgctcgtaaaagagccaagaaggccaagcaagcctttgagcag
atcaagaaggaaaggtttgatcgtttcaataattgctttgagtctgtggccaccaacatt
gatgagatctacaaggccctctcacgcaacagcagtgcccaggctttccttggcccagaa
aacccagaggagccatacctggatggcatcaactataactgtgtggctccaggaaagagg
ttcagacccatggacaacctgtctggaggagagaagactgttgctgccctggctctgctc
tttgctattcacagctacaaacctgcccccttctttgtcctggatgagattgatgctgct
ctggacaacactaacattggcaaggtggccaattacatcaaagaccagtcggtgcagaac
ttccaggccatcgtcatttctctgaaggaggaattctacaccaaggccgactcactcatc
ggtgtttatccagagcaaggagattgtgtcatcagcaaagtgcttacttttgacctctcc
cagtatcctgatgccaacccaaatccaaatgaatag
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integrated database retrieval system
