Sander lucioperca (pikeperch): 116039378
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Entry
116039378 CDS
T07345
Symbol
herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116039378 (herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116039378 (herc4)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116039378 (herc4)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
HECT type E3
116039378 (herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
116039378
NCBI-ProteinID:
XP_031140030
Ensembl:
ENSSLUG00000023985
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All DBs
Position
15:complement(12593362..12609631)
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AA seq
1068 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKQVCDVGCGHRHTAFLLEDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQIILAVSCGESHTLALNDKGLVFSWGQGSDGQLGLNN
FEECVRVPRNIKSLSDVQIAQVACGYWHSHALSRGGQVFSWGQNRYGQLGLGINGQSIPT
PQIIQSLQGIPFAQISAGGAHSFALTLSGAVFGWGCNKFGQLGLNDSNDRSFPALLKSLR
SQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSANHEINPRKVFELMGNVVTQIA
CGRQHTIAFTPSREKMDSFGLGGNGQLGTRSTCNRKSPAPVKGPWCSCNSPTDTGHPNLL
LFPNIYFLPSLHNIADSERGCFVKRIYAGGDQSFAHYCTANKLQNIDDVRIQDPYRKICT
LNEDIINKWCNHSPGRLPQEISNEIDLVFSSASCLNGSFLSMSHPDHYSTSSKCSGVDMN
QARLLFHRLVQQDHPEIAQQIAASLEKNLIPRLSNSPPDIEALRLYLTLPECPLFSDRNN
YVTIAIPFAKSLLSLKEAPLKVLGNWWSTFEPRVFQRLVELYKGVVVYLLQMHKMGIPSV
EQRIFTCFLDTSLRLLEILHMVSERAGHIIQYDKFYIHELDDLIDIRNDYVTWIQRQMYP
MGHDGGVTLCRYPFVFDAQAKTTLLHTDAVIQMQMAVDQAQMQNFSSMFMPAVESVNPCL
ILIVRRENIVGDTMEVLRKSKNVDYKKPLKVIFVGEEAVDAGGVRKEFFLLIMKELLDPK
YGMFRYYEESRLIWFSNKTFEDIDLFNLIGIICGLAIYNLTIVELNFPVALYKKLLKRKP
TLDDLKELMPDVGRSLQHLLDYTEDDLEETFCLNFTITEENYGATEVLELVPNGEDINVN
QSNRQDFVNAYVDYVFNTSVAPLFECFYAGFHKVCGGKVLELFQPNELQAMVIGNTNYDW
TELEKSTEYKGEYWADHPTIRLFWEVFHNLPLEKKKQFLLFLTGSDRIPILGMKSLKLVI
QPTGGGEHYLPVAHTCFNLLDLPKYRSLETLREKLLQAIDHNQGFNLA
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggtaatgcttcctacggacagttaggcttgggtgggattgacgaagag
attgtggttgagccacgaaaatgtgaattctttcacgggaagcaagtgtgcgatgtgggg
tgtggccacagacacacagccttccttctggaggatgggacagtatacacctgtggctgc
aatgacctaggccagctgggacatgagaagtccagaaagaaaccagaacaggttgtggcc
ctggatgcacagatcatactggcggtgtcatgtggagagtcccatacactcgccctgaat
gacaaaggcctggttttctcatggggtcagggctcagatgggcagttgggccttaataac
tttgaagaatgtgttcgtgtgcctagaaacatcaagagtttgtcagatgtacaaattgct
caggtagcctgtgggtattggcactcccatgcactttcaagagggggccaagtcttctct
tggggccagaatcgatatggacaactcgggctaggaataaacggacagagcattcccacg
ccacaaatcattcagtctctgcagggcattccttttgcccagatatcagcaggtggtgct
cacagctttgcactcactctctcaggagccgtgtttggctgggggtgcaataagtttggt
cagctgggtctcaatgacagcaatgatcggtctttcccagccctgctgaagtctcttaga
tcgcagagagtgatttacatctcctgtggagaagatcacacagcagcactgaccaaggaa
ggaggtgtgtttacatttggagcaggaggatacgggcaactcggacataactctgcaaac
catgaaatcaaccctaggaaagtgtttgagctcatgggaaatgtagtcacacagattgca
tgtggaaggcagcacacgattgctttcacaccctcccgtgagaagatggactcatttggg
cttggtggtaacgggcagcttggtactcgctccacttgcaacagaaaaagccccgccccc
gtcaaaggcccctggtgttcctgcaattctccaacagatacaggtcatcccaacctcctc
ctctttccaaacatttatttcttgccgtcattgcataacattgcagactcagagcggggc
tgttttgtcaagaggatttatgccggaggagaccagagctttgctcactattgcactgcc
aataaactccagaacatagacgacgtgaggatacaagatccctacagaaagatctgcacc
ttgaatgaggatattataaacaagtggtgcaaccactcaccaggaagactgccacaagaa
atctccaatgagattgacctcgtgttctcctcagcaagctgcctcaatggatcttttctg
tcaatgagtcatccagatcactacagtaccagcagtaaatgttcaggggtggatatgaac
caggctcgcctcctgtttcacagactggtccaacaagatcaccctgagatcgctcagcag
attgctgccagtctggagaagaacctaattcccagactaagcaactctcctccagacatt
gaagccctgaggctctacctcactctcccagaatgccctctcttcagtgaccgaaataat
tacgtgaccatcgctatcccgtttgccaaatcactcctcagtctgaaagaggctccattg
aaagtgctaggaaactggtggtctacgtttgagccccgagtcttccagcggctggtcgag
ttgtacaagggagtggtggtgtatctgcttcagatgcacaagatgggcattccttcggta
gagcagagaattttcacctgtttcctggacacgtccctccgactcctggagatcctgcac
atggtgagtgagagagcaggacacatcattcagtacgataaattctacatccatgagttg
gacgacctgatagacatccgaaacgactacgtcacatggattcagaggcagatgtaccca
atgggtcatgatggtggggtgactctgtgcaggtatccctttgtgtttgacgcccaagcg
aagaccacactgcttcatactgatgctgtcatacagatgcagatggcagtggaccaggca
cagatgcaaaacttcagctccatgttcatgccagcggtggaatctgtcaacccgtgcctc
atcctcatcgtccggagggaaaacattgtcggagacaccatggaagtcctcaggaagtcc
aagaacgttgactacaagaaaccactcaaggtgatcttcgtgggagaagaggccgtcgat
gcaggaggcgtgagaaaggagttcttcctcctgatcatgaaagagctgctggatccaaaa
tatgggatgtttcgttactacgaggagtccaggctcatctggttttcaaacaagactttt
gaggacatcgacttgtttaacctgatcgggatcatctgcggcctggccatctacaatctc
actatagtggagctcaacttccctgtggccctttacaagaagctcctgaagaggaagccg
acactggatgacctgaaagagctaatgccagatgtgggaaggagtctgcagcacttactg
gactacacagaagacgacttggaggaaaccttctgcttgaacttcacaatcacagaggaa
aactatggtgccacagaggtcttggaactagtaccgaatggcgaagacatcaatgtcaat
cagtcaaacaggcaagacttcgtcaatgcatacgtggactatgtcttcaacacatcagtg
gccccgctgtttgagtgcttttacgcaggcttccacaaggtgtgcggtggaaaggttcta
gagctgttccagccaaatgaactgcaagccatggtcatcggcaacaccaactatgactgg
acggagctcgaaaagagcactgaatacaaaggggagtactgggcggaccatcccaccatc
aggctcttctgggaggtgttccacaatcttcctttagagaagaaaaaacagtttctcttg
ttcctcacaggaagtgaccgcatacccattttgggcatgaaaagcctgaagcttgtgatc
cagccaaccggtggaggggagcattacttacctgtggcccacacctgcttcaacctgctg
gacctgcccaagtacaggagtctggaaacactccgtgagaagcttctacaggctatagat
cacaatcaaggctttaacctcgcctga
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