Sander lucioperca (pikeperch): 116039411
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Entry
116039411 CDS
T07345
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116039411 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sluc04040
]
116039411 (scn8aa)
Ion channels [BR:
sluc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
116039411 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
GPHH
FraC
HpsJ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
116039411
NCBI-ProteinID:
XP_031140117
Ensembl:
ENSSLUG00000014786
LinkDB
All DBs
Position
12:complement(38595285..38639818)
Genome browser
AA seq
1959 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTLESLVTLELRINEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPKGLVAVPLEDLDPYYLKSQKTFIVLNRGKTIFRFSATPALYFISPLN
PVRRVAIKILIHALFSMIIMFTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINTTKAIDWNEYIM
NETNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLM
TQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEALQ
KEEEFKAMLDQLKKQQEDAQAAAMATSAGTVSEDAVEDDGGGHLSCSSSEMSKLSSKSAK
ERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQSLLSIP
GSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPYRRSSYSGY
HGKRNSTVDCNGVVSLIGPGHGGRLLPEVKIDKAAPDDSPTTEVEVKKKLSGSLMVSVDQ
LNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPLWIKIKETM
NLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGEMLFKLVA
MDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISLDCELPRWHMNDFFHSF
LIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLA
ATDDDGEPNNLQISVRRIKIGIAWIKAKMRILVASLLKKPQMEDEQKPLDDMYDKKLNCI
ANHTGVDINRDLDYVKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESDF
ENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVVEEVVVEPVEEYLEPEACWTDGC
VAKYKCCDVDISTGWWKRWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQR
KTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALG
YSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMG
VNLFAGKYYYCFNQTSEEYFPVDVVNNKTQCEALMQQNYTEVRWKNVKINFDNVGAGYLA
LLQVATFKGWMDIMYAAVDSREVEDQPDYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIID
NFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVFDFVTQQVFD
ISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFTTEFLLKLFALRHYYFTNGW
NIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALM
MSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTSA
GWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAII
LENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHPLRVPKPN
TIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYEP
ITSTLRRKQEDVSARTIQNAYRIHLIRRGIIFKRRTFTNNKFENGGTNQEKKESTPSTAS
LPSYDSVTKPDKEKQDENKEDWARKEKDKNQKDEWESKC
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggtgacacttgagctgcgcatcaatgaggagaagaacaagaagccacccaagcag
gacagcagctaccgtgacgatgatgacgagaacaagcccaagcccaacagcgacctggag
gctgggaagagcctgccctacatctacggggacatccctaagggattggtggcggtacca
ctggaagacctggacccatactacctaaagtctcagaaaacatttatagtgctaaataga
gggaagacaatcttccgttttagtgccacgcctgccttgtacttcataagtcctcttaat
ccggttaggcgagtagctattaaaattttgatacatgctcttttcagcatgatcattatg
tttactattttgaccaactgtatattcatgacctttagtgatcctcccgagtggtcaaaa
caagtagagtacacattcacgggaatttatacatttgagtctcttgttaaaatcacggca
cgaggattctgtatagacgggtttacattccttagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggactgaaaacc
attgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagtgtctttgccctcattggtctccagcttttcatgggcaacctgcgccac
aagtgtgtgatctggccaatcaacaccaccaaggccatcgactggaatgagtacatcatg
aatgaaaccaatttctacttcctgcctggccagttggatgctcttctctgtgggaacagc
tctgactctggccgctgcccagagggctacacatgcatgaaagctgggaggaatccaaac
tacggctacaccagctttgacagcttcggctgggccttcctggctctctttcgactcatg
acacaggacttctgggaaaacctttacatgctgaccctgagggcggcagggaagacatac
atgatcttctttgtgttggtgatctttgtgggctcgttctacttggtgaatctgatctta
gctgtggtggccatggcttacgaggagcagaaccaggccaccatggaagaggccctgcag
aaggaggaggaattcaaggccatgctggatcagctcaagaaacagcaggaagacgctcag
gcggctgccatggcaacctctgcgggtactgtgtcagaggacgcagtagaggacgatgga
ggaggtcatctgtcatgcagttcctctgagatgtcaaagctcagctccaaaagtgccaaa
gaacggcgtaatcgtaagaaaaagtggcggcagaaagagcaagagaaggagaaaggcgac
agtgagaagtttgtcaagtcagagtcagatgatggcagcaaaaggagccgcttccgtttc
cctgataatcgcttgggtcgaaagtcttccattatgaaccagtccctcctcagtatacct
ggctcacctttcctgtcccgccacaacagcaagagcagcatcttcagttttaaggggcgc
ggtaaggacgtgggatcggagaacgagtttgccgatgatgaacacagcacggtggaggag
tgcgaggagcgccggggctccctgttcagcccttatcggcggagcagctacagtggatac
cacgggaagaggaacagcacggtggattgcaacggcgtggtgtcgctcatcggccctggg
cacggtggacgtcttctgcctgaggtgaaaatagataaggcagcccctgacgacagtccg
actactgaggttgaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccag
ctcaatacctcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaac
acactagtggaggaactggaggagtctcaacgcaagtgtccgccatgctggtataaattt
tctaacacattcctgatctgggagtgctccccactgtggattaagatcaaggaaactatg
aacctgattgtcatggaccccttcgtggacttagccatcaccatctgtatcgtcctcaac
accctcttcatggctatggagcactaccccatgacccccgactttgaagacatgctgtct
gtaggcaatctggtgttcacagggatctttgcaggggaaatgctttttaagttggtggct
atggatccatactactacttccaggaggcctggaactgttttgacggtttcattgtaacg
ctgagtttagtggagctggctctggctgacgttgagggcctgtctgtgctgcggtcattt
cgattgctgagagtgttcaagctggccaagtcatggcccaccctcaacatgctgatcaag
atcatcggaaactcagtgggagccttggggaacctgactctggtgctggccatcattgtc
tttatctttgctgtggtgggcatgcagctgtttggcaagagctacaaagactgtgtgtgt
aaaatctctcttgactgtgagttgcctcgctggcacatgaatgacttcttccactccttc
ctgatcgtcttccgggtgctgtgcggtgaatggattgaaaccatgtgggactgcatggaa
gtggcgggccaggccatgtgcctcattgtcttcatgatggtcatggttatcggtaacctg
gtggtgttgaatctgttccttgccttgctgctgagctcattcagtgctgacaacttggct
gcaacagatgacgacggtgagcccaacaacctgcagatttccgtcaggcgtatcaagatt
ggcattgcatggatcaaagcgaagatgcggatattggtggccagtctgctgaagaaacca
cagatggaggacgagcagaagcctttagatgacatgtatgacaagaagctgaactgcatt
gctaaccacaccggggtggacatcaaccgtgacctggactatgtcaagaatggtaacggc
accaccagcggtattggcagcagcgtgggcaagtatatgatcgatgaggaccacatgtcg
ttcatccacaacccaaacctgaccgtctgtgtgcccattgctgtgggagagtctgacttt
gagaaccttaacacggaggacttcagcagcgagtcggaaaatgaaaacagcaaagagctg
gatgacaccagttcgtcagagggcagtaccatcgacatcaagccagatgttgtggaggag
gtggtggtggagccggtggaggaatacttggaacccgaggcgtgttggacagatggttgt
gtggccaagtataagtgctgtgatgttgacatttctacgggctggtggaagagatggtgg
tacctgagaaaaacctgctacctgattgtggagcacaactggtttgagaccctcatcatc
ttcatgatcctcctcagtagcggtgccctggcctttgaggatgtgtacattgagcagagg
aagaccattcggatcattttggagtacgccgacagggttttcacctacatcttcatcctg
gagatgttgctgaaatgggtcgcatacggttttgtcaagtatttcaccaatgcctggtgt
tggctggacttcttcattgtggatgtgtctatagtcagccttgtagctaatgcgctgggc
tactccgatctagggcccattaaatcactcaggacactaagggccttgagacccctcaga
gccttgtcacgttttgaagggatgagggtggtagtcaacgccttggtgggtgccatccct
tccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatcatgggg
gtcaacttgtttgcgggcaagtactactactgtttcaatcagacatcagaggaatacttt
cctgtcgacgtggtcaacaacaagacccagtgtgaggccctcatgcaacaaaactatacc
gaggtcaggtggaagaacgtcaagatcaactttgataatgtgggcgccggctacctggcc
ctgctgcaagtggccacattcaaaggttggatggacattatgtacgcagctgtggattcc
agagaggtggaagaccagcccgactatgaagtcaatatctacatgtacatctactttgtc
gttttcatcatatttggctccttcttcaccctcaacctctttattggtgtgatcattgac
aacttcaaccagcagaagaaaaagtttggaggtcaggatatatttatgacagaggaacag
aaaaagtactacaatgccatgaaaaaactggggtccaaaaagccacaaaaacctattcct
cgaccacagaacaaggtccaaggcatggtgttcgactttgtgacgcagcaggtctttgac
atctccatcatgattctaatctgtctcaacatggttactatgatggtggaaacggacgat
cagtcagatgaaacagaaaacgtcctctactgggtcaacttcatctttattgtagtcttc
accaccgagttcttgctaaagcttttcgcccttcgccactattacttcaccaatggctgg
aatatctttgatgtggtggtggtcatcctgtctattgtcggtatgttcctggctgatata
attgagaagtactttgtgtcaccaaccctgttcagggtgatcaggttggctcgtattggc
cgtatcctgcgtctgatcaaaggagctaagggcatccgcactttactctttgctctgatg
atgtcactgccagccctgttcaacattggcctactgctcttcctggtcatgttcatcttc
tccatctttggcatgtctaactttggctatgtaaaacacggagcaggaattgatgacttg
tacaactttgagacatttggcaacagcatgatcattctgttcatgatcactacgtcagct
ggatgggacggcttgctgctgccgatcctcaactacccaccagactgcgatcccaatttg
gagaaccctggtacatctgtgaagggtgactgcggtaacccatcagtgggaatcttcttt
tttgtcatgtatatcataatttccttcctgattgtggtcaacatgtacattgccatcatc
ctggagaacttcagtgtggccacagaggaaagtgctgatccactcagtgaggacgacttt
gagaccttctacgagatctgggagaagtttgaccccactgcctctcagttcattactttt
gccaagctctctgactttgccgacgcactggagcacccacttcgtgtgccaaagcccaac
actatagaactaattgccatggatttgcccatggtgagtggcgatcgcattcactgccta
gacatcctgtttgccttcacaaagcgagtgctgggtgacagtggggagttggacatgctg
aggcaacagatggaggagcgatttgtggcagccaacccctccaaggtgtcgtatgaaccc
atcacctccactcttcgccgcaaacaggaggatgtctctgccagaactatccagaatgcc
taccgcatccaccttattcgacgcggcatcatcttcaagcgtcgtacttttactaacaat
aagtttgagaatggcgggaccaaccaagagaagaaggagagcacaccatccacagcctct
ctcccctcctacgacagtgtgaccaaacctgacaaggagaaacaggatgaaaacaaggag
gactgggctaggaaagagaaggacaaaaaccaaaaagatgagtgggaatcaaagtgttag
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