Sander lucioperca (pikeperch): 116039635
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Entry
116039635 CDS
T07345
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X25
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116039635 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116039635 (rims1b)
Membrane trafficking [BR:
sluc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116039635 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
116039635 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
PDZ
PDZ_6
FYVE_2
Motif
Other DBs
NCBI-GeneID:
116039635
NCBI-ProteinID:
XP_031140423
Ensembl:
ENSSLUG00000013795
LinkDB
All DBs
Position
4:5145500..5237989
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AA seq
1521 aa
AA seq
DB search
MWVCNLCRKQQEILTKSGEWFSGSGARPGSLGTPATGGEAQRDRKLLRSRSQAPPSSTNA
NAGPPNGTQLPASVTAAKGADTMPGSRSQSEPPREKKRPVSLHEQNGKGGMGRGSGRRAA
GKLTSQSSLDERVVPGERGERRLGDGRRLEKIHSQDYEDGEGNMGRSETHRRRPEDEEQR
ERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHARVSKVRHERRHSDLAINEVGLGP
GDGGGGGGGGGEVPENRLARRGGGGGGAGDRKALLENHQVYSGDRTVGVGGGAPPAGGGV
RSGTQPGGPVPPDWGQNKGRLEHGPARTPRDKGGDNLLRKDSQSSDQSESLRPPPPRSYK
SKRGVNKRQMSISSSEEEGGSTPEYTSCEDVDMESVSEKGDWDCHSLDPTVWHHPVTWQP
SKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKMTETGRLGAFITKVKKGSLADVVGH
LRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIGSIHRIMSKNFLRKVY
RAYQDIPRIPESSHPPLESTGSSSFESQKMDRPSISVMSPTSPGTLRDLPLVLPGQLSVK
LWYDKVGHQLIVNVLQAIDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSAEPKW
NQTFLYSHVHRRDFRERMLEITVWDQPRVQEEESEFLGEILIELETALLDDIPHWYKLQT
HDMSSIPLPQPSPYLPRRHVHGDSPSKKLQRSHRIIDSEFDDGLMVVTKDAERNSRERER
GSTLAVPEQQRPVQHRSRSVSPHREDSCRTRSRPAHVPMQRSLDEIHQNRHHSHSPSRYQ
DSHLEHQRSGDSDYEYSEDSEVLEMHRSIRGGSAECLHTNRGIGRYSNTLPPKMPLLVNG
IHKDIYSSTLPACLKSKPYHRREGGSTMPRSILTHRVLRFTDEVTVSDLQPSLDRARSAS
TTCLRPDTNFYSPDRDRQYSNSSGPNCQRGSKKSLEGDSRIQPTSILRGSRGRGGPLRPF
GQTALAGSCLNSPRLDRAHPHGSPSSPTGTPSSGRRGRQLPQLPAKSSSIEQALAVEERA
RQLQMKVHSYRPSASHDPETDLKTKREMYAEQRRSSDNMSARSSDSDMSDVSALSRASSA
SRLSSTSYMSIQSERPGGRLRSKSLEEEKKDRRISWGVNGEEERRSTGKRRFSAELKRRR
HTVAGDTRESSRQLRSAGRSMLKSSSVSGEIYTQERTDGSQSDTALGTVGGGSKKRRSSL
SARVVAIVGNRRSRSTSQISGPEGKSKKEKGAPIQRSTETGMAVELTRNMSRQPSKESNN
GSMNSCNSEGNLIFSGVNLGASSQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMMEKKG
QLEVEVIRARGLVQKPGSKSLPAPYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQVLLFE
ESPQGKVLQVIVWGDYGRMDHKSFMGVAQILMEELDLSSTVIGWYKLFPPSSLVDPTLAS
ITRRASQSSLDSSSGPPGVRS
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtatgcaacctgtgccgtaaacagcaggagattcttaccaaatcaggagaatgg
ttttcagggtcaggggcgcgacctgggagcctgggcaccccagccactggaggtgaggcc
caacgggacaggaagcttctccgctccaggtcccaagccccgccctctagcaccaacgcc
aacgcggggccgccgaacgggacacagcttcccgccagtgtcactgctgccaagggggcc
gacaccatgcctggctcccgctcccaaagtgaaccacctagagaaaagaaaaggccagtt
tctctccatgagcaaaatggtaagggaggcatgggccgcggtagtggccgaagagctgct
gggaagttgacatctcagtcatccctggatgagcgagtggttccaggggagagaggagag
agacgcttaggagatggacggcggctggagaagatccattctcaggactacgaggacggg
gagggcaacatgggtcgttcagaaacccaccggagacgccccgaggacgaggagcagagg
gagcgccagcgccgcgaggaggagttccagaatcgttaccgtagtgatcccaacctggca
cgatacccggtgaaaccgcagaaggaggagcaggagatgcgcatgcacgccagggtgtcc
aaggttcgccatgaacggcgacacagcgatctggcgatcaacgaggtgggactggggcct
ggcgacggaggagggggtggaggaggcgggggggaggtacctgaaaaccgtctggccagg
aggggtggaggtggaggaggagcgggagaccgcaaggcccttttggagaaccaccaagtc
tactctggggataggaccgtgggggttggagggggcgctccacctgcaggaggtggagtg
agatcaggaacccaacctgggggaccggtgcctccggattggggccagaacaaaggccgc
ctggagcacggtccggcacggacaccaagggacaagggtggggacaacctgctgaggaag
gactctcagagctcggaccagtcggagtctctgcggccgccccctccacggtcatacaag
agcaagcgcggagtcaacaagaggcagatgtccatcagcagctcagaggaggagggcggc
tccacgcccgagtacaccagctgtgaggacgtggacatggaaagcgtcagcgagaaaggt
gactgggactgtcattctctagatcctacagtgtggcatcatccagttacatggcaaccg
tccaaagagggcgaccacctaatcggacgcatcacgctaagcaagaggtcggcaatgccc
cgcgaggctggctcccttctcggcctaaaagtggtaggagggaagatgacagagacaggg
agactcggggccttcatcaccaaagtcaagaaaggcagccttgcagatgttgtgggacac
ctacgagcaggtgacgaggtgctgcagtggaatggaaagtcgttgccgggggcaactaag
aaagaagtgtacaacattatccttgaatccaaggctgaacctcaagtggaaatagttgtt
tcaagacctataggctctatccaccgaattatgtccaaaaacttcttgagaaaagtgtat
agagcatatcaagacatcccaagaatcccagagtcatcccaccctccactagaatctaca
ggctccagttcctttgagtcgcaaaagatggaccgtccctcgatatcagtgatgtcccca
accagccccgggaccctccgagaccttcctctggtactgcctggacaactctctgtgaag
ctgtggtatgacaaagtgggccatcagttgatcgtcaacgtccttcaagccatagacctg
ccacctcgaccagacggacgaccccggaacccctatgtcaagatgtacttcctgcctgat
aggagtgataagagtaaacggcggactaaaaccgtgaagaagagcgctgaaccaaagtgg
aaccagaccttcctatattcccacgttcaccggcgggacttcagagagcgcatgctagag
atcacagtgtgggaccagcccagagtccaggaggaggagagtgaattcctgggagagatc
ctgatagagttggagacggccctgctggacgacattcctcattggtataaactccaaaca
catgacatgtcctctatacctctgccccagccttccccgtacctcccgcgcagacacgtc
catggagacagccccagcaagaaactacagaggtctcatcgcatcattgattcagagttt
gatgatggtttgatggtagtgactaaagatgcagagcgtaactccagggagagagagcgg
ggcagtacgttggcagtgccggagcagcagcggcccgtccagcaccgctcccgttcagtg
tctcctcacagagaggactcctgcaggactaggtcgcggcccgcacacgtgcccatgcaa
aggagcctggatgagatccaccagaaccgccaccactcccactccccttcccgttaccaa
gactcgcacttagagcaccaacgctctggggactcggactacgagtactctgaggacagt
gaggtcctggagatgcacaggtctatccgtggcgggagtgccgagtgcctgcacacaaac
aggggcataggtagatacagcaacacactaccccccaaaatgcccctgttagtaaacggt
atccataaagacatttacagctccaccctccccgcatgcctaaagagcaagccgtaccac
cggcgggaagggggcagcaccatgcctcgtagcatccttacacaccgtgtgctcaggttc
actgatgaggtcacggttagcgacctgcagccgtcgttggacagagcgaggagtgccagc
accacctgtctgagaccagacaccaacttttactcccctgacagagacaggcagtatagc
aattcatcaggtccaaactgtcaaaggggcagcaaaaaaagcctggagggggacagtcgt
atccagcccacctctatcctgaggggcagtagggggagagggggcccgctgaggcccttt
ggccagacagccttggctgggtcctgcctaaactcaccacggctagacagagcacaccct
catggcagcccctcctctccaacggggactccctcatcaggtcgcaggggcaggcagctg
cctcagctccccgcaaaaagcagcagtatagagcaagcccttgcagtagaggagcgagcc
cggcagctgcagatgaaagtacattcctaccggccttcagcctcccacgacccagagacg
gacctcaagaccaaacgggagatgtacgcagagcagaggcgaagcagcgacaacatgtcg
gccagatcgtcagacagcgatatgagcgacgtgtcggccctctcccgtgccagcagtgcc
tctcgcctcagtagcaccagctacatgtccatccaatcagaacgccccggaggacgactc
agatccaagtcattagaggaggagaaaaaagacaggaggatctcgtggggggtgaatgga
gaggaggagaggaggtcgacaggaaagagacgtttctctgcagagttgaagcgcaggaga
cacactgtagccggagacaccagggagtccagtcggcagctacgatcggcgggccgcagc
atgctgaagagctccagtgtgagtggagagatctacacccaggagcgcaccgacggcagc
caatcagacacagctctgggcacggtgggcggcggcagcaagaagagacgctccagcctc
agcgcgcgggtggtggccatcgtcggcaaccgtcgcagccgcagcacttcacagatcagt
ggccctgaggggaagagtaagaaggagaagggtgcacctatccaaaggagcacagagacc
ggcatggcggtagagttgaccaggaacatgagccgccagcccagcaaagagtccaacaat
ggcagcatgaacagctgcaactctgaggggaatttgatcttctctggagtcaatctgggt
gccagcagtcagttcagtgacttcctggatggcctgggcccggctcagttagtgggaagg
caaaccctggctactcctgccataggcgacatccagatcggtatgatggagaaaaaggga
cagctggaggtggaagttatcagagctcgaggactggtacaaaagccaggatcaaaatcc
ctccctgctccatatgtcaaggtctatctgctgaataatggagcgtacgtagccaaaaag
aaaaccaagattgcacggaaaacacttgacccactgtaccagcaagtactgctattcgag
gaaagcccacagggtaaagtcttacaggtgattgtatggggagactacggccgcatggac
cataaaagcttcatgggagttgcacaaatcctaatggaggaactggacttatcaagcaca
gtcattggttggtacaagttgttcccaccgtcctccttggtggatccgacacttgcctcc
ataacacggcgggcttctcagtcgtcactcgacagttcctccggacctcctggggtccga
tcctag
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integrated database retrieval system
