Sander lucioperca (pikeperch): 116039646
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Entry
116039646 CDS
T07345
Symbol
si:dkey-237i9.8
Name
(RefSeq) platelet endothelial cell adhesion molecule isoform X1
KO
K06471
platelet/endothelial cell adhesion molecule
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04148
Efferocytosis
sluc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116039646 (si:dkey-237i9.8)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116039646 (si:dkey-237i9.8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sluc04090
]
116039646 (si:dkey-237i9.8)
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116039646 (si:dkey-237i9.8)
04091 Lectins [BR:
sluc04091
]
116039646 (si:dkey-237i9.8)
CD molecules [BR:
sluc04090
]
Proteins
116039646 (si:dkey-237i9.8)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
116039646 (si:dkey-237i9.8)
Lectins [BR:
sluc04091
]
I-type lectins (Siglecs)
116039646 (si:dkey-237i9.8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
I-set
Ig_C17orf99
Zwei_Ig_N
V-set
Big_3_5
Ig_ADGRF3
Motif
Other DBs
NCBI-GeneID:
116039646
NCBI-ProteinID:
XP_031140440
Ensembl:
ENSSLUG00000012682
LinkDB
All DBs
Position
4:4604636..4627893
Genome browser
AA seq
763 aa
AA seq
DB search
MGPLLLLTSTLLSSYFHAGRTVNTQKLFTIRDITLSIEPSINVTRNTNVTLRCKAVVSSS
GQEALSREYTIYKDGNTVYTKTSSTSEDLLYPLSEARVSNTGKYKCKINIEGKNMTSGVK
KLTVTGLSKPVLSLNKDMVSEGEEIKATCTADGETGSIFFYFYEDSKEIQEKQVNSNQAE
AKLRITSVGIHKIHCAYTVLITPDSFKSEKSSAVIVSVKELPITPVLEIFPQSKIYEGDQ
LDFLCTVRNVPQHPEGKLYLSQGNQLLSSGDTKVNHSMVALAKDPGEFECRFEMGDVTKF
VLKMVPVTELFSVPTFTMSPAEVFQKEDMTLTCKSESFASERLRREELTYTLDPPENLLT
RKGPGVFHGKALQYDFNYTCVAQARGIVKHSETLTVRPKVSVSIPKISVVGKAVLGQPLK
ILCQSDSGSLPINYTLLREYDELSTTIVKQPFQQAFFTVTITKPDEITKYMCEAKNNHKE
APLSKRLNATVIVPLTHPIMTVIPNPEISEGDHLYLICGVAGTPPVTFKWYRVGYEQPLN
TTTSNKNNTAYQVPKVSKQDSGTYYCEAFNHANNVVISDEVNIQVRLAFWKKVVIGAFCL
LAVSVLVVVSVLCFISKRGKREAAAELSVKPSSPKSDDSLTVNLTHDTEVYKAATVRVNR
AAVSVWSERPPEAANDEESSMVSKEPDVEYTEVVHPRPVDPARVPLRKGTDTVYSELQNS
PHGAADHHDYGSVEYAELNSEHPETNHYRPEVNGHQELPAPVD
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgggccccctactactgctcacctccacgctcctgtccagctacttccatgcagggagg
acggtgaacacacagaaattattcacgatacgagacatcaccctgtccatcgagcccagt
attaatgttactcggaacaccaatgtgactctgagatgcaaggccgtcgtcagcagctct
gggcaggaggcgctgagtcgtgagtacactatatacaaggacggcaacacagtctacacc
aagacctccagcacctcggaggatcttctgtaccctctgtccgaggccagagtctccaac
accggcaaatataagtgcaagatcaacattgaggggaaaaacatgaccagcggagtcaag
aaactcacagtaacaggcctgtcgaaaccagttctcagccttaacaaggatatggtcagc
gaaggggaggagataaaggccacatgtacagcagacggtgagacaggctccattttcttt
tacttctacgaggactccaaagagatccaggagaagcaggtcaactccaaccaggcagag
gccaagcttcgcatcactagcgttggcatccacaaaattcactgtgcctacactgtcctt
ataacgccagactccttcaagtccgagaaaagcagcgctgtcattgtttcagtcaaagaa
cttcccatcacaccagttttggagattttcccccagtccaagatctatgaaggagaccaa
ctggacttcttgtgcaccgtcagaaacgttcctcagcaccctgaaggtaaactctacctg
agccaggggaaccagcttctcagcagtggagacaccaaagtcaaccacagcatggttgca
ctggccaaggaccctggcgagtttgagtgcagattcgagatgggagatgtaacgaaattt
gtcttgaagatggttccagtgactgagctgttttcagtgcccactttcaccatgtctcct
gctgaagtctttcaaaaggaagatatgacgctaacctgcaaaagtgagagctttgcctct
gaaagactccgcagggaagaactgacttacactcttgatccacctgaaaacctactgacc
cgcaagggcccaggagtatttcatggcaaagccctacagtatgatttcaactatacctgt
gtagctcaagccaggggcatcgtgaaacacagtgaaaccctgactgttcgtcctaaagtg
tctgtctccattccaaagatctcggtggttggcaaagcagtcctaggacagcccctcaag
atcctctgtcagtcagacagtggcagcctgccaataaactacacccttctgagggagtac
gacgaactgagcacaaccattgtcaagcagccctttcaacaagctttcttcacagtcacc
atcaccaagcctgacgaaatcaccaagtacatgtgcgaggcgaagaataatcacaaggaa
gccccgctcagtaaaagactcaacgccactgtcatagtgcctctgacgcacccgattatg
accgtcatccccaacccagaaatctctgagggagatcatctctacctcatatgtggtgtt
gccggcactccgcctgtcacctttaagtggtaccgtgttggctatgaacagccgctaaat
accaccacctccaacaagaacaacacggcctaccaggtccctaaagtgtccaaacaggac
agtggcacgtactactgcgaggctttcaaccacgccaacaatgtcgtcatcagtgacgag
gtcaacatacaggtgcgcctggcgttctggaagaaagtggtgatcggggcgttctgtctg
ctggcggtgtctgtgttggtggtggtctctgtgctgtgcttcatatccaagagaggtaaa
agagaagcagctgctgaattatcagtaaagccttcgagccctaaatcagatgactcttta
acagtgaatctaacccacgacacagaggtttataaagcagccacagtaagggtgaaccga
gctgcagtcagcgtgtggagcgagcgaccacctgaagcagccaatgacgaggagagcagc
atggtgtccaaggagcctgatgtggagtacactgaggtggtgcatccccggccggtagat
cctgccagagtcccactgagaaaaggcacagacacagtgtacagtgagctccaaaactct
ccacatggtgctgctgaccatcatgactatggttcagtcgagtacgctgagctcaacagt
gaacatcctgagaccaatcactaccgtccagaagtcaacggccaccaggagctgccagcg
ccggtggattag
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