KEGG   Sander lucioperca (pikeperch): 116039657
Entry
116039657         CDS       T07345                                 
Name
(RefSeq) THO complex subunit 4-like
  KO
K12881  THO complex subunit 4
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03013  Nucleocytoplasmic transport
sluc03015  mRNA surveillance pathway
sluc03040  Spliceosome
sluc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116039657
  09122 Translation
   03013 Nucleocytoplasmic transport
    116039657
   03015 mRNA surveillance pathway
    116039657
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    116039657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sluc03019]
    116039657
   03041 Spliceosome [BR:sluc03041]
    116039657
Messenger RNA biogenesis [BR:sluc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     116039657
    TREX complex
     116039657
Spliceosome [BR:sluc03041]
 Complex C
  Other components
   EJC/TREX
    116039657
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116039657
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT RRM_3
Other DBs
NCBI-GeneID: 116039657
NCBI-ProteinID: XP_031140468
Ensembl: ENSSLUG00000012854
LinkDB
Position
4:4714485..4719029
AA seq 259 aa
MADKMSMSLDDIIKLNKKGGSGRSGGSSRTGGSSGRAGGSSRPMRSRQNNFNRERNNRAT
PYTRPRELPDKWQHDMFEEHAGGRRGQSAGAERSVESSSGKLLVSNLDFGVSDSDIKELF
AEFGTLQKASVHYDRSGRSKGTADVHFETKAEALKAMKHYNGVPLDGRPMKIQQVTSDVD
TESRPSTQSSNRGFDRSRLGQPKVERNEWSKGGDRGERRQGGGRGGFRGRGRGGGNRPQL
SAEELDAQLDAYNAKMDTS
NT seq 780 nt   +upstreamnt  +downstreamnt
atggctgataagatgagtatgtctttggacgacattatcaagctcaataagaaaggagga
agtggccgctcaggaggatcgtccaggaccggtggaagttcaggtcgggccggtggatcg
tcgaggccgatgcggagtcgacagaataacttcaaccgtgagagaaacaacagagccaca
ccgtataccaggcccagagagttaccagacaaatggcagcatgacatgtttgaggagcac
gctggtggacgcagaggtcaaagtgcaggagcagaaagaagtgtagaaagtagtagtggc
aagttgctggtttccaatctggactttggcgtctctgactcagatatcaaggagttgttt
gcagagtttgggacattacagaaagcatctgtgcactacgaccggtctggtcgcagtaaa
gggactgcagatgttcattttgagactaaggcggaagcactcaaagccatgaagcattat
aacggtgtcccacttgatggccgtcccatgaaaatccagcaagtgacttcagacgtcgac
acagagagtagaccgtctacacaaagttcaaacagaggctttgaccgcagcaggcttgga
cagcccaaggttgaaaggaatgaatggagtaaagggggagaccggggtgaaaggaggcaa
ggtggcggcagggggggtttcaggggtcggggaagaggaggtggaaacagaccccaactt
tctgcagaggagctggacgcccagttggatgcttacaatgccaaaatggacaccagttag

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