Sander lucioperca (pikeperch): 116039657
Help
Entry
116039657 CDS
T07345
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03013
Nucleocytoplasmic transport
sluc03015
mRNA surveillance pathway
sluc03040
Spliceosome
sluc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116039657
09122 Translation
03013 Nucleocytoplasmic transport
116039657
03015 mRNA surveillance pathway
116039657
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116039657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116039657
03041 Spliceosome [BR:
sluc03041
]
116039657
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116039657
TREX complex
116039657
Spliceosome [BR:
sluc03041
]
Complex C
Other components
EJC/TREX
116039657
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
116039657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_3
Motif
Other DBs
NCBI-GeneID:
116039657
NCBI-ProteinID:
XP_031140468
Ensembl:
ENSSLUG00000012854
LinkDB
All DBs
Position
4:4714485..4719029
Genome browser
AA seq
259 aa
AA seq
DB search
MADKMSMSLDDIIKLNKKGGSGRSGGSSRTGGSSGRAGGSSRPMRSRQNNFNRERNNRAT
PYTRPRELPDKWQHDMFEEHAGGRRGQSAGAERSVESSSGKLLVSNLDFGVSDSDIKELF
AEFGTLQKASVHYDRSGRSKGTADVHFETKAEALKAMKHYNGVPLDGRPMKIQQVTSDVD
TESRPSTQSSNRGFDRSRLGQPKVERNEWSKGGDRGERRQGGGRGGFRGRGRGGGNRPQL
SAEELDAQLDAYNAKMDTS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagatgagtatgtctttggacgacattatcaagctcaataagaaaggagga
agtggccgctcaggaggatcgtccaggaccggtggaagttcaggtcgggccggtggatcg
tcgaggccgatgcggagtcgacagaataacttcaaccgtgagagaaacaacagagccaca
ccgtataccaggcccagagagttaccagacaaatggcagcatgacatgtttgaggagcac
gctggtggacgcagaggtcaaagtgcaggagcagaaagaagtgtagaaagtagtagtggc
aagttgctggtttccaatctggactttggcgtctctgactcagatatcaaggagttgttt
gcagagtttgggacattacagaaagcatctgtgcactacgaccggtctggtcgcagtaaa
gggactgcagatgttcattttgagactaaggcggaagcactcaaagccatgaagcattat
aacggtgtcccacttgatggccgtcccatgaaaatccagcaagtgacttcagacgtcgac
acagagagtagaccgtctacacaaagttcaaacagaggctttgaccgcagcaggcttgga
cagcccaaggttgaaaggaatgaatggagtaaagggggagaccggggtgaaaggaggcaa
ggtggcggcagggggggtttcaggggtcggggaagaggaggtggaaacagaccccaactt
tctgcagaggagctggacgcccagttggatgcttacaatgccaaaatggacaccagttag
DBGET
integrated database retrieval system