Sander lucioperca (pikeperch): 116039815
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Entry
116039815 CDS
T07345
Symbol
cntn1b
Name
(RefSeq) contactin 1b
KO
K06759
contactin 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04514
Cell adhesion molecule (CAM) interaction
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116039815 (cntn1b)
04517 IgSF CAM signaling
116039815 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116039815 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sluc00537
]
116039815 (cntn1b)
Cell adhesion molecules [BR:
sluc04515
]
Immunoglobulin superfamily
Contactins
116039815 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sluc00537
]
Others
116039815 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_4
Ig_PDGFR_d4
Fn3_VIN3
Pur_ac_phosph_N
PsaS
Motif
Other DBs
NCBI-GeneID:
116039815
NCBI-ProteinID:
XP_031140737
Ensembl:
ENSSLUG00000013959
UniProt:
A0A8C9YWU2
LinkDB
All DBs
Position
20:complement(13209779..13221277)
Genome browser
AA seq
1042 aa
AA seq
DB search
MASAALLLLALSSSVSLTVAVLFGEPRIFGDDATGYGPIFEEEPVDVVHSEDSPDGRISM
NCRARANPPASYRWRRDNWEIKLMEQPDEHYSLVGGNLVITNPRQKKHAGTYVCVARNIY
GTVISKEARVKFGFVEEFPQEERDPVYVKEGQGAVLLCAPPKAWPQEVTYRWIFNEFPVF
LHTDRRRFVSQKTGNLYISKVEAQDAGNYSCFVSSPVTGKSVFSKFIPLIPLPPDDGEER
KYPADIRVKFPDTTAMLASNITMECFALGNPIPHIVWRKVDHTDLPPNHEISESGAVLHL
YNVQYEDVGGYECEAINTKGKDWHKAWLYVESAPEWAETINNTQIDIGSEHTMRCVASGK
PFPFIRWYKDGYMYGKGELKFSSLTFDDSGMYQCIAENYWGIKYANAELRVISCAPTFEF
NPVRKQLLGAKDGRVVIECKPRAAPRPRYTWKKGKELLFNNSRISIMFDGSLEILNATTN
DEGVYTCFAENDKGKANSSGYLTITEATSITEPPEDTEVKVGDEVILRCAASYDPMLDIT
FIWSIDFRVIDFDSEWQHYERDMSEDGSGDLRIKNVQIWHEGRYHCTAQTVVDSDTAYAD
LKIVGVPGPPGVIRVEEIGDTWVKLLWTKGAEHNSPIHSYTIQTRHFWALNEDDWKDAST
SPTFLDGNAERAEVTDLYAWMEYQFRIIATNEYGSGEASIPSLKIKTWDASPVISPTDVA
GYGGRNGEIVITWNPVQPWYFYGKKFGYIVAFKPHDAYDWWYETISDPETRRYVHRDSYF
IPTDEDFQVREFQVKIKSFNVKGDGPYSLTKVIYYPRDVPVESPTDVYARPVSSTEALVW
WLPVVDTGTGLQQYIEGYQVKYWRKYDDPEPGANRIFVAATVNQTRLENMLPDSHYLIEV
RAFNGAGLGPPGEHCEMFTKRPPPPEPPRMWRYVTWTGQWLYVWWDHIQYDWFGNISFPL
YYKVMFRKTGYYYGKVYVTGWHFMDFPMPQFGDYELMVRGRYEGGDGPIRKISIKGKASM
ITPTLSLASLVLLALCIVGLEM
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgctgctttactgctgctggccctctcctcctcagtctccctcacagtggcg
gtcctatttggcgagcctagaatttttggagatgatgccactggatatggccccatcttt
gaggaggagcctgtggatgtggtgcacagtgaagactcccccgatgggagaatctccatg
aactgcagggcacgagcgaacccacctgcctcatacaggtggcgccgtgataactgggaa
atcaagctgatggagcagccagacgaacactacagcctcgtgggggggaacctggttatc
accaaccccagacagaagaaacacgctgggacgtacgtctgcgttgccaggaatatctat
ggcaccgtcatcagcaaggaggccagggtcaagtttggatttgtggaggagtttccccag
gaggaaagagacccagtgtatgtcaaagaaggacagggggctgttctgctgtgtgcccct
ccaaaagcctggccacaggaggtgacctaccgctggatcttcaatgagttcccggttttc
ctgcacacagaccgccgacggtttgtctcccagaagacggggaacctatacatctccaaa
gtggaagctcaggatgcaggaaactactcctgttttgtttccagccccgtcaccgggaag
agcgtcttctccaagttcattcccctcatccccttaccccctgacgatggtgaggagaga
aaatacccagcagacatcagggtgaagtttccagatactactgccatgctggcctctaat
attacaatggagtgttttgctctgggaaaccccatccctcatattgtttggaggaaggtg
gaccacacagaccttccaccaaaccatgagatcagtgaatcaggagctgtgcttcatctg
tacaatgtacagtacgaagatgtaggaggatatgagtgtgaagccatcaacactaaagga
aaggattggcacaaggcctggctgtacgtggagtctgctccagagtgggcggaaaccatc
aacaacactcagatcgacatcggctcagagcacaccatgcgctgtgtggcatcagggaag
cccttccctttcatccgctggtacaaagatggatatatgtatgggaagggggagttgaag
ttttccagtctcacttttgatgactcaggaatgtaccagtgtatcgctgagaactactgg
ggcatcaaatacgccaacgctgagctgcgagtcatctcctgtgctcctacattcgagttc
aaccctgtaaggaagcagcttcttggagcaaaagacggccgcgtggtgatcgagtgtaaa
ccccgagctgctcctaggccgcggtacacctggaaaaaggggaaagagctcctcttcaac
aattcccgcatttccatcatgtttgatgggagtctggagatcctcaatgccaccaccaat
gatgagggcgtgtacacctgctttgctgagaatgacaaaggaaaggccaacagctctggc
tatctcaccatcacagaggctaccagcatcacagaaccacccgaagacactgaggtaaag
gttggggatgaggtgattcttaggtgtgccgcttcatacgaccccatgctggacatcaca
ttcatctggtccatagacttcagggtcatcgactttgactctgagtggcaacactacgaa
cgcgatatgagtgaagatggcagcggtgacctgagaataaagaatgtccagatttggcac
gaaggtcgctatcactgcacggctcagacagtggtggacagcgatactgcatacgctgac
ctcaagattgtaggtgttcctgggcctcccggtgtgatccgggtggaggagatcggggac
acgtgggtgaagctgttgtggactaaaggagccgagcacaacagccccattcactcctac
accattcaaaccagacacttctgggccctgaatgaagatgactggaaggatgccagcacc
agtccaacctttcttgacggcaatgcggagagggcagaagtgacagacctgtacgcctgg
atggaatatcagttcaggatcatcgccaccaatgagtacggctccggagaggccagcatc
ccctccctcaagataaaaacctgggatgcttctccagttatttctcccactgatgtggcg
ggttatggaggtagaaatggcgagatcgtcatcacatggaatcccgtgcagccgtggtat
ttctacggaaaaaagtttggctacattgtggcatttaagcctcacgatgcttacgactgg
tggtacgagaccatttcggaccccgaaacgaggcgttacgttcacagggactcctacttc
attcccactgatgaagatttccaggtcagagagtttcaggtgaagatcaagtcgtttaat
gtcaaaggagacggaccatacagcctcactaaggtcatctactacccaagagatgtacct
gtggagtctccgacagacgtctatgccagaccggtgtcctccactgaagctctggtctgg
tggttgcctgtggtcgacactggtacaggcctgcagcagtacattgagggataccaggtc
aaatactggaggaaatatgatgatccagagccgggagcaaaccgtatatttgttgcagcc
acagtcaaccagaccaggttggagaacatgctgccagactcgcactacctcattgaggtc
cgtgctttcaatggagccggcctcggaccccccggtgaacactgtgagatgttcacaaag
aggccaccaccaccagagcctcccaggatgtggcgctatgttacctggacaggacagtgg
ttgtatgtgtggtgggatcatatccagtatgactggtttggcaatatttccttcccactg
tactacaaggtgatgttcagaaagacaggctactactatgggaaagtctacgtcactggc
tggcacttcatggactttcccatgcctcagtttggagactatgagctgatggtacgcggc
cgttatgaagggggggatggcccaatcaggaagattagcattaaaggtaaagcatcaatg
atcacgccaactctaagccttgcatctttggtgctgctggccctgtgcattgtgggattg
gaaatgtaa
DBGET
integrated database retrieval system
