Sander lucioperca (pikeperch): 116039895 Help Entry 116039895         CDS       T07345                                  Name (RefSeq) synaptopodin-2 isoform X1   KO K24066   synaptopodin-2 Organism sluc  Sander lucioperca (pikeperch) Pathway sluc04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sluc00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     116039895  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04990 Domain-containing proteins not elsewhere classified [BR:sluc04990]     116039895 Domain-containing proteins not elsewhere classified [BR:sluc04990]  PDZ domain-containing proteins   Other PDZ domain-containing proteins    116039895 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PDZ PDZ_6 Calsarcin Motif Other DBs NCBI-GeneID:  116039895 NCBI-ProteinID:  XP_031140869 Ensembl:  ENSSLUG00000022306 LinkDB All DBs Position 17:complement(24012626..24031215) Genome browser AA seq 1592 aa AA seqDB search MGTGDYICVTLRGGAPWGFTLREGEGDTYRPFLVSQVEQGGRAFLAGVREGDEVVSLNGE PCAYLTLLRAFALIDTSIDCLQLLVKRYCTIPPEAYESEETYCGERDSSGEALESTTIHI FSPKQRSQSPRKLYISESQDEASYGELGSNKAFPKGPQLLHTQLHVPSSGDRRNREPVFK ENDKEAHRCFSPGDMVELQVSLSEQTLDDVGCTSLGSAHGVEGELSNKEAVETIHTTTAS HYVPYSVREPLGQRGVVLSSPLMLGQVEVILQQPAASGAGRGILSVGGPRVSGSVGSQSE GEEGEGHCEGVPGSSTVSFRTPSEEATPAEEQDSDSEGDPDKPNKHRARHARLRRSESLS EKQVKEAKSKCKRIALLLTAARSNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDKPEYSDE EDTENEDEKQETHTVEFTLVAPNASEIDKHFLTNAHSSKGVLTINWDKGLLEIERNLNNQ AEMECLPDTKGKGAVMFAQRRQRMDEIAAEHEELRRQGIAVEGVQMADKKIEEQSYMQST TEGHAYMDVNIHQQSQHQQQYQQYQEQQYYAQQQNYQQQQQQQQQQQQQYQQQQQYEQHH YQQQQMYQKQQEYHQEQQQMQHYSTNINGTVQHEMQSSLNNRTAKPFSVENMATSPYSPA MSGTNQDSVGQGEQIASRDERISTPASRTGLLSDSRRRNAGKPMFTFKEAPKVSPNPALL NLLNRNDKKLGFESGPEEDYLSLGAEACNFLQSQRVKQKNPPPVAPKPVINPNSPPWFPP IEVSNQDMPQQAENSVSTPAVAPTTETTLAPELEPNPAPASKPSPPPAPQDAPASTTTEE QCPCTLPEPESQQQLLQVTAQENGHMNSTLQPEPAPVTSWAQAQTQAQQQASTNSWHPAH VQPQEPPQSQSPPQPPWVTRHPTQTQAQPQPPTNTWTPQIQPSWSQPQEQAQAQTHAQPS WAMGQEQPQSHPQVQPPWTHSHEQPNLQQMQPTWGQPQEPMQQQPQAPWAQPSQTDPQHQ PSWVQPLQKSQVQPPWAQQVQPESQPQPPWVQQPQHQAPQQAWPQAQAPGQPQTSWVSVQ PQQQPSINPWPPSQTQVQPPWIQAAQAQPPAPPQAILNPWPPVPAQAQSQPSWAQHPSEH GQTPINSWAQEQNQAQHQPPWAQPVPPQSTPQPNWQQSTSKTPPQPPMNTWPPPQAQPQT PVNAWAPQSQQTPVNVSTSMVNTRPSPKPWHPPQNAPQNRTPPTPPQRMHSFTIGQRASS PINPMATVLNPSSQGSAFEMPAVRGKGADMFAKRQSRMEKFVVDSETVQANKASRSTSPV ASLPNEWKYTPNVRAPPSRAYNPIQSPSYPPAATKQPPPSSPLTKAKTKAKEKQKPAPKP LSVVDVMKHQPYQLNSSLFTFGPAAEAANPPEPKPDIAPPNPPVENQTIRYEQMAPIQPL GPYNAPYPQQAYGMPMQPIMHDGHYQQNPANVYPPSNPYQQPPGGPYQQAYNQQYQQPVP PAYHPQAPQSPNHTYQQALQTPYQPANSPPYLAASSVPYQPQPLSSYVVPCFPVAGRPES ASGGNTVAAPKPKFTAKKSSAQVWKPTAVDKE NT seq 4779 nt NT seq  +upstreamnt  +downstreamnt atgggcaccggggattacatctgcgttacgctgcgtggtggtgcaccctggggtttcacc ctaagagagggagagggggacacctacagacctttcttagtttcccaggtagaacaaggt ggtcgtgccttcctagctggagtgcgagaaggtgatgaggtggtgtcactcaacggagag ccatgtgcgtatctcacccttttacgagcctttgccctcattgacacatcgatcgactgt ctgcagctgctcgtcaaaagatactgcaccatccctccagaagcctatgaatcagaagag acatactgtggtgagagggactcctctggtgaggctttagagagcacaaccatccacatc ttctccccaaagcagaggtcccaaagcccaagaaaactctacatatctgagtcccaggat gaggcctcttatggggagttgggcagcaacaaagcgttccccaagggaccccagctgctt cacacccagctacatgttccctcatctggtgatcggagaaaccgggagcctgtttttaag gaaaatgataaagaagcacaccggtgcttctcccctggggacatggtcgagctccaggtg tccctgtccgagcaaaccttggacgatgtgggctgcacctctcttgggagtgctcatggg gttgaaggagaactctcaaacaaagaggctgttgagacaatccacaccaccaccgcatca cactacgtaccgtattctgtcagagagccgctcggccagcgtggagtggtgctcagctct cctttgatgctggggcaggtggaggtcattttgcagcagccagcagcatcaggagcaggg aggggcatcttgagtgtgggtggccccagggtcagtggaagtgttggatcccaaagcgaa ggagaagaaggagaagggcactgcgagggggtgcctgggtcttccactgtctcattcaga actccctcagaagaggcaacaccagcagaagagcaggactctgattctgagggcgatcca gacaaacccaacaagcatcgggcaagacacgccaggctcaggcgcagcgagagtctatct gaaaagcaggtgaaggaggccaaatccaaatgtaaacgtattgctctccttcttacggct gctcggtccaaccccaacaacaagggggtgttgatgttcaagaaacatcggcagagggcc aagaaatacacacttgtgagctacggcacaggagaagacaaaccagaatacagcgacgaa gaggacacagaaaacgaagacgagaaacaagaaacccacactgttgaatttacccttgtg gctccaaacgcttctgaaatagacaagcattttctcactaatgcccatagtagcaaaggt gtgctaactatcaactgggacaagggtcttcttgagattgaaaggaacctgaacaaccaa gcagagatggaatgtttgcctgacaccaagggcaagggtgccgtaatgtttgcccaacgg cgtcaacggatggatgagattgctgctgaacatgaggagcttaggcgccaggggattgcc gtggaaggagtgcagatggctgataagaagatagaagagcagtcctatatgcagtccaca acagaaggtcatgcttacatggatgtaaatatacaccaacaaagccaacaccaacaacag taccagcaatatcaggaacagcagtactatgcgcaacaacagaactaccaacaacaacaa caacaacaacaacaacaacaacaacagtatcagcagcaacagcagtatgaacaacatcat tatcaacaacagcaaatgtatcagaagcagcaagaatatcatcaagagcaacagcaaatg cagcactattctacaaacatcaatggcacagtccaacatgaaatgcagagttctctcaac aatcgtactgcaaagcctttctcagtagaaaacatggcgacttccccttattctcccgca atgagtgggaccaatcaagattctgtgggccaaggagagcagatagcttcccgggatgag cgcatttctacccctgcaagtcgcactgggcttttgtcggactccaggagaagaaatgct ggcaagccaatgttcacttttaaggaagcaccaaaagtatcaccaaacccagcactgcta aacctcctcaacagaaatgacaagaagttgggttttgagtcagggcctgaggaagactac cttagccttggggctgaggcttgtaatttcctgcagtctcaacgagttaaacaaaagaat cctccaccagtggctccaaagcctgtgatcaaccccaactctcctccatggttcccaccg atagaagtgagcaaccaggacatgcctcaacaagctgaaaatagtgtatccacacctgct gtagcccccaccacagagactacacttgctccagaactagagccaaaccctgcacctgct tctaaaccctctccccctcctgccccccaggacgctcctgccagcaccacgacagaggaa cagtgcccatgtactctcccggagcctgaatctcaacaacagcttctgcaagtgacagcg caggaaaatggtcatatgaattctaccctgcagcctgagcctgctcctgtgactagctgg gctcaagcacaaacacaagcacaacaacaggcatctaccaattcttggcatccagctcat gtgcagccccaggaaccacctcaaagtcagtccccaccacagccaccttgggtgacgcgt catcctactcagacccaagcacagcctcaacctcccacaaatacttggacccctcaaatt cagccatcctggagtcagcctcaagagcaagcacaagcccagacacatgctcagccatca tgggccatgggtcaagagcaaccacagtctcatccacaggtccagccaccctggacacat tctcatgagcagccaaatctgcagcaaatgcaaccaacttggggtcaacctcaagaacca atgcagcagcagccccaggcaccatgggcacagccatcacaaacagaccctcagcatcaa ccatcatgggttcaacccctgcaaaaatcccaagtacaacctccttgggctcaacaggtc cagccagaatcccagccacagccaccatgggttcagcaaccacagcatcaggctccacaa caagcatggccacaggcccaagcaccaggtcagcctcaaacatcttgggtctcagttcag cctcaacagcaaccctcaattaatccatggcctccatcacaaactcaagttcagccccct tggatccaagcagcccaagcacaacccccagcgccgcctcaagccattttaaatccatgg ccaccagtacctgcccaggctcagtcccaaccatcatgggcccagcacccttcagaacat ggtcaaacaccgataaattcttgggcccaagagcaaaatcaggcccaacatcaaccacct tgggctcaaccagttccaccccagtccacaccacagccaaactggcaacagtctacttca aagactccaccacagccaccaatgaatacatggcctccacctcaggcacaacctcagaca cctgtgaatgcctgggcgccacagtcacaacaaacccctgtgaatgtttccacgtcaatg gtgaacactcgtccctctccaaaaccttggcatccaccacaaaatgccccacaaaaccgg acccctccgactccaccacagcgaatgcactcttttaccattggtcaacgagcttcatca cctatcaacccaatggccactgtcttaaacccatcatcccaaggttcagcttttgagatg ccagctgtcagagggaaaggagcggatatgttcgccaagaggcagtctcgtatggagaaa tttgttgtggactctgagactgtgcaagcaaacaaggcaagccggtcaacatcaccagtt gcttccttaccgaatgagtggaaatatacacccaacgtacgtgctcctccttcacgggca tataatcctattcagtccccttcttatcccccagcagcaacaaagcagccccctccaagt agccctttaaccaaagccaagacaaaagccaaagagaaacaaaaacctgcccctaaaccc ctcagtgttgtagatgttatgaagcatcaaccctatcaactcaattcctcactctttacc tttggcccagcagcagaggctgccaacccccctgaacctaagcctgacattgcacctcct aacccacctgttgaaaaccaaacaattagatatgagcaaatggcccccatccagccactt ggaccatataatgccccatacccccagcaagcctatggaatgcccatgcagcctatcatg catgatggccactaccagcaaaacccagctaatgtttatcctccctcaaacccatatcaa caacctcctggtggtccgtaccagcaggcatataaccaacagtatcagcaacctgtccca cctgcttatcatccccaagctcctcagtctccaaaccatacataccaacaggcactgcag accccttaccaaccagctaatagccctccctacctggcagcttcctcggtaccttaccag ccacagcctctcagtagctatgttgttccttgttttcctgtagctggaaggcctgaatct gcatctggtggcaatactgtagctgctcctaaacctaagtttacagctaaaaagagctca gctcaggtgtggaaacctacagcagttgataaagagtga

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