Sander lucioperca (pikeperch): 116040054
Help
Entry
116040054 CDS
T07345
Name
(RefSeq) cadherin-20-like
KO
K06807
cadherin 20, type 2
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116040054
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Major cadherins
116040054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116040054
NCBI-ProteinID:
XP_031141149
Ensembl:
ENSSLUG00000003188
LinkDB
All DBs
Position
23:10553591..10648189
Genome browser
AA seq
795 aa
AA seq
DB search
MGDRLHFPAVASALLPVALCILALLPHGLLGKPESAGSSALLQRVKRGWVWNQFFVLEEY
TGLEPLYIGKLHSDMDKGDGSIKYILTGEGAGTTFTIDDSTGDIHAIQRLDREVKAQYAL
RAQALNRLTDRPLEPESEFIVKIQDINDNEPRFLDGPYQASVPEMSNIGTAVIQLTATDA
DDPTYGNSARVVYSILEGQPYFSVDAKTGMVRVSLADMDRETRENYTVVIQAKDMGGQLG
GLAGTTTVNIRLGDVNDNPPMFDQRLYQMSIPESAPVGSVVGRIWAKDRDIGVNAEMKYS
IIDGDGRDTFEISTDPTNLFGIITVKRPLNFESKPSYTLKVEGANTKLDPAFRHRGPFKD
VTIVHVSVEDVDEPPLFDSVAYFIELSEDAEIGTVVKTVSARDPDAANNTVRYSIERSSD
PDKFFYIEITSGSLMTVRSLDREEIGWHNITVLAMEMNNPTQISSVSVAVRVLDVNDNPP
SLTHYLEGYVCENAKAGQLIQTVTAVDPDEPLGGQHFYYSLAPEAANNPNFTLRDNQDNT
AWILTRRGGWAQQDQTVFYLPIFVSDGEQPVQTSTSTLTIRVCSCDHEGNVLSCNAEAYS
LPASLSRGALIAILACIFVLLVMILLMLSLRTHRKKPYLCDEEENVHENIVRYDDEGGGE
EDTEAFDIAAMWNPREAHHHPGKMRQDMVPEIESLSRYVPQVCVMGGGSGGDSNVHGYVL
AKLLDADMDPCAPPYDSLQTYAYEGEGSVAESLSSLQSGTSNTDHEYDYLNDWGPRFKKL
AEMYGVLETNAPPMW
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgattacattttccagcagttgccagcgccttgctccctgtggccctctgc
attttggcccttctgccccacggccttctgggaaaacccgaatctgcaggcagctcagca
ctgctgcagagggtgaagagaggctgggtgtggaaccagttctttgtcctggaggagtac
actggactggaaccactttatattggaaagctccactcagacatggataaaggcgacggc
tcgattaagtacatcctgacaggcgagggcgcgggtaccaccttcaccatcgatgacagt
acgggggacatccacgccattcagaggctggaccgggaggtgaaggcccagtacgctctc
cgtgcccaggccctcaaccgcctgacagacaggcctctggagcccgagtccgagttcatc
gtcaagatccaggacatcaacgacaacgagccaaggtttctggatgggccctaccaggcg
tctgtacccgaaatgtccaacataggaacagctgtgatccagctgaccgccacagacgcc
gacgaccccacgtatggcaacagcgctcgtgtggtctacagcatcctggagggccagcct
tacttctcagtggacgccaagactggcatggtccgtgtgtccctggcagacatggaccgg
gagaccagagaaaactacactgtggtcatccaggcaaaggacatgggcggacagctgggg
ggactcgctggtaccaccactgtcaacatcaggctcggcgacgtcaatgacaacccgccc
atgtttgaccaaaggctgtatcagatgagcatcccagagtcggctccggtgggttcagtg
gtgggtcgtatctgggcaaaggacagggacatcggggtcaacgctgagatgaagtacagc
attatcgatggagacgggagggacacctttgaaatcagcaccgaccccaccaaccttttc
ggcatcatcacagtgaaaaggccactgaactttgagagcaagcccagttatactctgaag
gtggagggcgccaacaccaaactggacccggccttccgccaccgcgggcccttcaaggac
gtcaccattgtgcatgtgagcgtggaggacgtggacgagcccccgctgtttgactcggtg
gcgtacttcatcgagctgtcagaggacgctgagatcgggacggtggtgaagacggtgtcg
gcgagggacccggacgctgccaacaacactgtgaggtattccatcgagaggtccagcgat
cccgacaagttcttctacatcgaaatcacttccgggtcgctgatgacggtgcgttcgctg
gaccgagaggagatcggctggcataacattaccgtcctcgccatggagatgaataacccc
actcagatctcaagcgtgtcggtggctgtgagggtcctcgatgtcaacgacaatcccccc
tcgctgacgcactacttggagggttatgtgtgcgaaaacgccaaagcaggacagctgatc
cagacggtgacggcggtggatccggatgagccgctgggtggacaacacttctactacagc
ttggctccggaggccgccaacaaccccaacttcaccctgagagacaaccaagacaacaca
gcgtggatcctgacgcggcgaggaggctgggcgcagcaggaccagaccgtcttctacttg
cccatcttcgtgtctgacggtgagcagccggtgcagaccagcaccagcacgctgaccatc
cgcgtgtgcagttgcgaccacgagggcaacgtcctgtcgtgcaacgccgaggcgtacagc
ctgcccgccagcctcagcagaggggcgctcatcgccatccttgcctgcatcttcgtcctg
ctggtgatgatcctgctcatgctctccctgcgcacccatcgtaagaagccctacctctgc
gacgaggaggagaacgtccatgagaacattgtgcgctacgacgacgaaggcggcggcgag
gaggacacagaggccttcgacatcgccgccatgtggaaccctcgcgaggcgcaccatcac
ccgggcaagatgagacaggacatggttcctgagatcgagagcctgtcgcgctatgtgcct
caggtgtgcgtcatgggcggcggcagcggcggagacagcaacgttcacggatacgtactg
gcgaagctcctggacgccgacatggacccgtgcgccccgccctacgactccctgcagacc
tacgcctacgagggggaaggttcggtcgcagagtcgcttagctcgctccagtcggggacg
tccaacacggaccacgagtacgactatctcaacgactgggggcctcgctttaaaaaactg
gccgagatgtacggcgtgctggagacaaacgctccaccgatgtggtag
DBGET
integrated database retrieval system
