Sander lucioperca (pikeperch): 116040164
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Entry
116040164 CDS
T07345
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116040164 (carmil2)
Membrane trafficking [BR:
sluc04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
116040164 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Carm_PH
CARMIL_C
LRR_6
TLN1-like_RS
Motif
Other DBs
NCBI-GeneID:
116040164
NCBI-ProteinID:
XP_031141277
LinkDB
All DBs
Position
7:complement(39011299..39065878)
Genome browser
AA seq
1867 aa
AA seq
DB search
MDSVCQNLRDEISELLKPHRVRLVTPVILNHADQPCGRSANRLVVLSQWRAFLVTNKQPV
RVESTFSYLEICSINIHSLTQIVLETDRQTLSLGVLHGEDLEAMVSHMSASLKRIFPDSS
PGKLLKTIPPDLRLRLRTLTDVIEEQLSSQPASCGGFSDTYAALCDFNEMPFREEIQWDV
DNIYCINNWRVFNLQDFSHLDSRDLALAVAALSFNQWFTKIYCKEFKLSVDIQQQLTFLL
SRSPSLEELSLEASGLKLDFAIKMAAALREHPSSALQSINLSGNPIEDKGVIALSQELGN
LAEGLKHLSLSRVSMTARGLGCLSQMLSSTQLFSASLTHLDLSANPGSLVTEEATFLFKF
LSSTNRLSHLDLSDTSCPLDTLFVSLSAGCCYKLMHLNLARNPFSHRKVREVTRSIREFF
SQSCELQYVGLSATKLPPQALRLLLQGLATNTRLLGLELDLSSCELRSAGAQVIQEHISE
ATAIRSLDISDNGFENNMVTLVLSVGRCHSLRHLALGRNFAMKSRALTDVLHRIAQLIQD
EECPLQSLSVCDSKLKTGIHILLSALGGHAALAEVDISGNNIGDTGAKMLAKALMTNTRL
RTLAWDRNNVTARGFQDVADALERNFTLQQMSGLADITQSYRSSPDRTKEALHKIQQCLD
RNNQRQCERVKQVFRAQQSEKVQGMCQQLEDSLQRLKHCNIQDVQADILTAHEVLHNARE
SFKLLPSLYEAGRKCASDGDLVNCILSDTATALTHEFNRSIQELATDLMRCAEAACPRLV
QRSSVCECLSECVSKRSRQTHTFLRSTLVEKTGQIISDRLRELRQTLSVSLAESIIEQVQ
QDLTMEQDKMDCLIKENSCIALKNIVPELRLVDSNFPTDDYSPAFWRNSFHSKSLRPAPS
IKSLLDADWEQQSRDRGVERERAGDAEEEGGRCGLALLPTATPLSVRFSGPSPSPSPSPP
GLRGRRRREGEVAADAAAAVSGARGASLIPPPSLPLLYSVSARAAEEEAAGRGGLPRRQA
PFPGCSPSPGPLPGSGSPDSPMEPLPTQGQTLRHYTASRPRPRRTHTQPPSSRPQEPVSK
VENESGEEMGRVDEGVEEFFTKKIIPDYALKGQWEESIPAQATPPEPSSTPSASTPFSSS
SDNIPSTSPTPTTVTSPSVPSTDTPFTSTDVSPLSTSSTRPAPSSITTSTLPTKNIKKKF
GDFFAFKRARAGRATKAGGGEGGGGAEGVRVKRTSIADLIRPLREAKEREREREREKGRG
ARSVEDANVYNDATTTEGSVATGRRLAGDARGTMAPAKTLTTTTPSSDTAPSYPTIATST
LPNLEEGALPVLLGRSPSPVVTSPLTEQERSGVQGKEAALGGTLYGERRLKVTKRSLREG
KSQSLILLTGLEPEDKDDTHSKKHASESTSSFEQRLQVMLHRMGVAKTPPADTKTYQNKD
EELRKANSEGAILDKPVPPPTYMKPRTMSTSSADPRHPMRALDPIRPDPIRPDPPLYPKP
ALPERPVVPLPPKPAVAAKPPLPTPARPASAPPSSSPAGRVQLRAHTFDGRPGESTAQNG
SQERPRGAASAPSSRKELLPPAPPPWRGPGAQERSEKAQSVTDESLPKPRPHMKPLPQRR
AVSVHEDTLAMTQELKAVLQRSPIRCRGKGGDLPTCTEDPSSGEEAHRAPEASHTGKQTS
EGKKEAVQMDELKAERGWTGCRRTVAETKHPPPGEEDTPGSRCPCSIAQAQQEASAPRLF
SPTASLDRAPSVLERPPALTQCLEKPPVTPTSEKKSPSTAPPLPRTLEKLPVSPPPQEKT
PSTIPAASESPVHPRVSPLSHKNKSPGAVAATADVRNSTQERGKALSTQHTMKAEPADQR
TEPPLSE
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggactccgtctgtcagaacctgcgagatgagatctcggagctgctgaagcctcacaga
gtccgtctggtgacgccggtgattctgaaccacgccgatcagccatgtgggagatcggcc
aacaggttggtggtgctgagtcaatggagagctttcctggttacaaataagcagcctgtc
agggtggagagcactttcagctacttggagatttgctccatcaacattcacagtctcaca
cagatcgtgttggagacagacaggcagactctgtctttgggtgtgttgcacggtgaggat
cttgaggccatggtcagccacatgagcgcctcgctgaagaggatcttccccgattcatct
ccaggaaagctactaaagacgattcctccggatctccggctgagactccgcacattgact
gatgtgatcgaagagcagctgagtagtcagcccgcctcctgtggaggattctctgatacc
tatgctgctctgtgtgatttcaacgagatgccattccgagaggagattcagtgggatgtt
gacaacatctactgcatcaacaactggagggtgttcaacctgcaggacttcagccactta
gacagcagggacttggcgttagcagtagcagctctgtctttcaaccagtggtttaccaag
atctactgcaaagaattcaaactgtcagtagacatccagcagcagctgaccttcctgctg
tccagatctcccagtctggaggagctctcactggaggccagtggactcaaactggacttt
gcaatcaaaatggcagctgccctgcgggagcacccctcctctgccctgcaatccatcaac
ctgtcaggcaatccaatcgaagacaaaggtgtcattgctctcagtcaggagctggggaat
cttgctgaaggactcaagcacctatctctgtcccgagtatcaatgactgctagaggtctg
ggctgtctgagtcagatgttgtcctccactcagctgttctcagcatctctgacccacctc
gacctgtccgctaaccccggcagcctggtgactgaagaggccacgtttctcttcaagttc
ttgtccagcaccaaccgtctgtctcatctggacctcagtgacaccagctgtcctctggac
acgttatttgtgtcactgtctgctggatgttgttacaaactgatgcacctgaacctggcc
aggaaccctttcagccacaggaaggtgcgggaggtgaccaggagcattcgagagttcttc
agtcagagctgtgagctccagtacgtcggcctgtctgcaaccaaacttcctccacaagct
cttaggttattactgcagggtctggcaaccaacactcgtctgcttgggctggagttggac
ctcagcagctgtgagctacgttcagcaggggcccaggtgatacaggagcacatctctgaa
gctacagctatcagaagtctggatatctctgacaatgggtttgagaataacatggtaact
ctggttctgtctgtcggtcgatgtcactctcttcgacacctcgcactgggaagaaacttt
gccatgaagtccagagctctcactgatgttcttcatcgtatagctcagctcattcaggac
gaagagtgtcccttgcagtctctatcggtgtgtgactccaagctgaagacagggattcac
atcctgttgagcgctctgggcggccacgctgctctggctgaagtggacatcagcggaaac
aacatcggagacactggagccaaaatgctggccaaggccctgatgactaacaccagactg
aggaccctagcatgggacagaaacaatgtaactgccaggggtttccaggatgtggctgat
gccttggagaggaatttcactctgcagcagatgtctggcctggctgatatcacacagagt
taccgcagcagcccggacagaacaaaagaggccctgcacaagattcagcagtgtctagac
agaaacaaccagagacagtgtgaaagagtgaagcaagtgtttcgagctcaacaatctgag
aaggtccagggtatgtgtcagcagttggaggacagccttcaacgtttaaaacactgcaac
attcaagacgtacaggctgacatcctgacagcgcacgaggtgctgcacaacgccagggag
tccttcaagctgcttccttctctgtatgaggccggcaggaagtgtgcctctgatggagat
ttggtgaactgcatcctgtctgacactgccactgctctgactcacgagttcaacagaagc
atccaggagctggctacggacctgatgaggtgtgcagaggcagcgtgtccacggctggtc
cagcgctctagtgtgtgtgagtgtctgtcagagtgtgtgtccaaaagaagccgacagaca
cacacattcctgagaagcactctggtggagaagacagggcagatcatcagcgacagacta
cgtgaactgagacaaacactgagtgtctctctggctgaaagcatcatagagcaggttcaa
caggacctgacaatggaacaggacaaaatggattgcctcataaaagagaattcatgcatt
gctctaaaaaacatcgtcccagagcttcgactggttgacagcaacttcccaactgatgat
tacagcccagcattttggagaaatagtttccactccaagagcctgaggccggccccttcg
attaagagtcttctggatgccgactgggagcagcagagcagggacagaggagtagagcga
gagagggcaggagatgctgaagaggagggcggaaggtgtggccttgctctgttgccgaca
gcaacccctctgtcagtcaggttttcagggccctccccttccccgtccccctccccgccg
ggactgcgaggaaggaggcggagggagggggaggtggcggcggatgctgcagcagcagta
tcgggagcaagaggagcatcgctcattcctcctcccagtctccccctcctttactccgtc
tccgctcgagctgcagaggaggaggctgccggccgcggaggcttacccagacgacaggct
cccttccctggctgcagccccagcccaggccccctccccggctctggatccccagattcc
cccatggagcctctacccacccagggacagactctaaggcattacaccgcctcccgacca
cggccacggcgcacccacacacagcccccctcctccaggcctcaggagccggtttcaaag
gtagagaatgagtccggtgaggagatgggccgagtggatgaaggagtagaggagttcttc
accaagaaaatcatccctgactatgcactaaaaggccagtgggaggagtcaatccctgcc
caagccactcccccagagccaagctccaccccctccgcctcaacccccttttcctcttcg
tctgacaatatcccctccaccagccccacccccaccactgtcacctctccctctgtccca
tctactgacacgcccttcacatccactgacgtttcacccctctctacatcctccactcgc
cccgccccctcttccatcaccacctccacccttcccaccaaaaacatcaagaaaaagttt
ggcgacttctttgccttcaagagggctcgagccggccgagccaccaaggccggagggggc
gagggaggcggaggagcagagggggtgagggtcaaacggacctccattgcagacctcatc
cgacccctccgcgaggccaaagaaagggagagagagagggagagagagaaggggagaggg
gcaaggtcagtggaggatgctaacgtttataatgatgccaccaccacagaaggatccgtt
gccaccggccgccgtcttgcaggcgatgcgaggggaacgatggcgcctgccaagacttta
accacgacaacgccttccagtgacaccgctccctcttaccccaccattgccacttccacg
cttcccaacctggaggaaggggcgcttcctgtcttgctgggccgcagccccagtcctgtg
gtcacctcgcctcttaccgagcaggagaggagcggcgtgcagggcaaggaggcggcgttg
ggagggactctgtacggagagaggagactgaaggtgaccaagaggtccctgagagagggc
aagagccagagtctcatcctgctgacggggttagagcccgaagacaaggatgacacacac
agcaagaaacatgcgtctgagagcacatctagttttgaacagaggcttcaggtgatgctg
cacagaatgggagtggccaaaactccgcctgccgacaccaagacataccagaataaagac
gaggagctgaggaaggccaactctgaaggtgctatcctggacaaacccgtcccacctccc
acatacatgaagcccagaacgatgtccacttcatcagcagaccccaggcatcccatgaga
gcgctggaccctatccgaccagaccctatccgaccagaccctcccctctacccgaagccc
gccctccccgagcgccccgtcgtcccgctgccgcccaaaccagctgtcgcagccaagccc
cccctgcccactccggctcgcccagcctcggctcctccatccagcagcccggcagggaga
gtccagctcagagcacacacgttcgatggcaggccgggagagagcacagcacagaatgga
agccaggagcgtccccggggtgcagcctccgctccgtcctccaggaaagagctgcttcct
ccagctccgcctccgtggaggggtcccggtgcacaggagcgctctgagaaagcacaatca
gtgacagacgagagtcttcctaaaccacgcccacacatgaagccccttccgcaacgcaga
gctgtgtccgtccatgaggacactctggctatgacacaagagctgaaggcggtgttgcag
aggtcgcccatccgttgccggggcaaaggaggggacctgcccacctgcactgaagatcca
tccagtggagaggaagcacatagagctccggaggccagtcacacagggaagcagacatct
gaaggaaagaaggaggctgtccagatggacgagctgaaggcagagagaggatggacgggc
tgcagacggacggtagctgaaaccaagcacccccctccaggggaagaggacaccccaggc
tcacggtgtccctgctctatagcccaagctcaacaagaagcctcagcgccccgactcttc
agtccaactgcatccctcgacagagcgccatccgttctggagaggcctccagcactaacc
cagtgcctggaaaagcctcctgtaacccccacatccgagaaaaagagccccagcacagct
ccgccgttgccccgaactctagaaaagctgccggtgtccccaccaccccaagaaaagacc
ccgagcacaatcccagctgcatctgaatccccggtacaccctcgagtgagccctctgtcc
cacaagaacaagagccccggcgcagtagcagccacagcggatgtgagaaacagcacacag
gagagagggaaggcgctctctacacagcacacaatgaaggcagagccagcagaccaaaga
actgagccccctctgtctgaataa
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integrated database retrieval system
