Sander lucioperca (pikeperch): 116040415
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Entry
116040415 CDS
T07345
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X14
KO
K06839
slit 2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
116040415 (slit2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sluc00536
]
116040415 (slit2)
Glycosaminoglycan binding proteins [BR:
sluc00536
]
Heparan sulfate / Heparin
Axon guidance molecules
116040415 (slit2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
Laminin_G_1
LRRNT
LRR_9
LRRCT
EGF_TEN
hEGF
LRR_1
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
LRR_EndoS
EGF_Teneurin
Laminin_G_3
EGF_TGFA-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
116040415
NCBI-ProteinID:
XP_031141570
Ensembl:
ENSSLUG00000012413
LinkDB
All DBs
Position
4:complement(26449865..26538857)
Genome browser
AA seq
1567 aa
AA seq
DB search
MVGALSPVGPGRSPVTALGLLVAVLVSVLSGGADGQPCPAQCSCTGTTVDCHGQGLRSVP
RNIPRNTERLDLNANNLTKITKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERLRL
NRNNLAVFPELLFLGTTKLYRLDISENQIQGVPRKAFRGAVEIKNLQLDYNHINCIEDGA
FRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRPRL
GLYTQCMAPPHLRGHNVAEVQKKEFACTGHQSSSSSSCSVLQCPESCTCSNNIVDCRGKG
LTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAFQGLRSL
NSLVLYGNKITEISKALFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLYDNKLQT
IAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLANKRIGQ
IKSKKFRCSAREQYFIPGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDH
IPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILT
SNRLENIHHRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAF
DTLHSLSTLNLLANPFNCNCHLAWLGDWLRRKHIVTGNPRCQSPYFLKEIPIQDVAVQDF
ACEDGNDENSCSPVLRCPAACSCLDTVVRCSNKGLTTLPKGLPKETTELYLDGNHFTQVP
VELSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLL
SLHGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPG
DMTDKLLLTTPSKKFTCTGPVDMSVQAKCEPCLSNPCKNDGTCSNDPVHYYRCTCPYGFK
GQNCEEPIHACISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDGCEINIDDCEDNDCENN
STCVDGINNYTCMCSLEYTGELCEEKLDFCAPELNPCQHDSKCILTPQGYKCECTPGYVG
EHCELDYDDCEENKCQNGGQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHEC
LNGAQCVVMGSDPRCQCLHGYKGDRCETLVSVNFVDRESYLQLPSSLLSPDTNISLQIAT
DEDSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQ
TLSLSIDGGPPKSINSISKQSTLNIDSPLYLGGMPERASASGGLSSMQHSSGGRNGTSFH
GCLRNLYINGKLQDLGAGLGTGAPGSGTAHSTTRQWLGHGVEPGCQPCQRGACVQGDCHP
TGHRGFTCTCHPGWTGTVCDQQVNNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDE
QDQDAANPCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQG
YAACQTQEKVSRLECRGSCPGGAEGQGPCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKC
GCTQCSS
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctctgagccccgttggccctggccgctccccggtgactgcgttgggactg
ctggtggctgttctggtatcggtcctgtccggcggagcggacggccagccctgcccggcc
cagtgctcctgcaccgggactacagtggactgtcacggccaagggctccgcagcgtgccc
aggaacataccccgcaacacggagagactggatctgaatgcaaacaacctcaccaaaatc
accaaggcggattttgcaggactgaggcatctgcgagtgttgcagctaatggagaacaaa
atcaccacaatcgagagaggggccttccaggacctgaaggagttggagagactgcgcctg
aatcggaataatctggccgtcttccccgagctgcttttcctgggaacaacaaagctttac
agacttgatatcagcgagaatcagattcagggggttccaagaaaagccttcaggggagct
gtggaaatcaagaacctccagttggactacaaccacatcaactgtattgaagatggagct
tttcgagcgttacgtgacctggaagtgctcaccctcaacaacaacaacatcagccgactg
tctgtagccagtttcaaccacatgccgaagctcaggacctttcgcctgcactccaacaac
ctgcagtgtgactgccacgtggcctggctgtcagagtggctgcgacagcgcccccgtctg
ggtctttacacacaatgcatggctccgccgcacttgagggggcacaacgtggctgaggtg
cagaagaaggagtttgcctgcacaggtcaccagtcgtcatcatcttcctcctgcagtgtg
ttacagtgcccagagtcctgcacctgcagtaacaacatcgtggactgcagaggaaaggga
ctgactgaaatacccaccaacctgcctgaaaccatcactgagatacgactggagcagaac
gccatcaaggtgatcccagctggagccttttctccttataagaagctgcgcaggatagac
ttgagtaacaaccagatatcagagttagcctcggacgccttccaaggcctgcgctctctc
aactctctggtgctatatgggaacaagatcactgagatttctaaagcactgtttgaggga
ctgttttctctgcagctattgttactgaatgctaataagatagcgtgtctgcgtgtggac
gcatttcaggacctccacaacctcaatctgctttcactatatgacaacaagctccagacc
atcgccaaggggaccttctcgtcgctaagagccatacaaacgcttcacttagcccaaaac
ccatttatctgtgactgccatctgaagtggctggcagattacctgcaggacaatcccatt
gagacaagcggtgcccgctgcacaagcccccggcgcctcgccaacaaacgaatcggacaa
atcaagagcaagaagttccgctgctcagcaagagaacagtatttcatcccaggtactgag
gattaccgcagtaagctgggaggagactgcttcgcagacttggcctgcccggagaagtgc
cgttgtgagggcaccacagtcgactgctccaaccaaaaacttaccaaaataccagatcac
atccctcagtacaccgccgaactgcgtctgaacaacaatgaattcactgtgcttgaggcg
acagggatcttcaaaaagttgcctcagctgaggaagattaacctgagcaataaccgtatc
actgacatagaggaggggacatttgaaggagcctcaggggtcaatgagttgattctgacc
tccaacagactggagaacatacaccaccgcatgctgaagggactcagtggcctccgcaca
cttatgctgaggagtaaccgtatcagctgtgtgagtaacagcagcttcgtggggttgagc
tcagtccgtctcctgtcgctctacgacaaccagatcacctcaatgaaccccggagccttc
gacacactgcactccctgtccacactcaaccttctggccaatcccttcaactgtaactgt
cacctggcttggctcggtgattggctgagaaggaaacacatcgtcactggtaaccctcgc
tgccagagtccttatttcttgaaggagatccccatccaggatgtagctgtccaggacttt
gcctgtgaagatggtaacgacgagaacagctgctctccagtgctgaggtgtccagcagcg
tgttcctgtctggacactgtggtgcgctgcagcaacaagggcctcaccacactgcccaaa
ggcctgcccaaagagaccactgaactgtatttggatggtaaccacttcactcaggttcct
gtggagctctccaattacaaacacttaacactcattgatttgagtaacaaccagatcagc
acgttgtccaaccacagcctcagtaacatgtccgagctgcttaccctaatcctgagctac
aaccgcctgcggtgcataccagtgagggcgttcgatggactcaagtctctccgtttgctg
tctctccatggtaacgacatatcactaataccagagggagccttcaaagacctgtcatcg
ctctcccacctggctctgggtgccaaccctctgtactgtgactgccacatgcagtggttg
tcagactgggtgaagagcggctacaaggagcctggcatcgcccgctgtgccgggcccggt
gacatgacggacaaactgctgctcaccacgccttccaagaagtttacctgcacaggtcca
gttgatatgagtgtccaggctaagtgtgagccctgtctatccaacccctgcaagaacgat
ggcacctgctctaatgacccagtgcactactaccgctgtacctgcccctatggatttaag
ggacagaactgtgaggagcccattcatgcctgtatcagtaacccgtgccagaatggcggc
acttgccacctgaaggaaggagaagggagcaacttttggtgtgtgtgtccagagggcttt
gaaggcgacggatgtgagatcaacatcgatgactgcgaggacaacgactgtgagaacaac
tccacctgcgtcgatggaattaacaactacacatgcatgtgctcactagaatacacaggg
gagttatgtgaagagaaactagatttctgcgctccagagctgaacccatgtcagcacgac
tcaaagtgcattttgacccctcagggatacaagtgtgagtgcactccaggctatgtaggt
gagcactgtgagctggattatgacgactgtgaagagaacaagtgtcagaacggaggtcag
tgcattgacgcagtcaatggctacacctgcgtctgtcctgagggatacagtgggttattc
tgtgagttctctcccccgatggtccttcctcgcaccagcccctgtgacaaccacgagtgc
ctcaatggggcgcagtgtgttgtcatgggatcggacccccgctgccagtgtctccatggc
tacaagggtgatcgctgtgagacgctggtcagtgtcaactttgttgaccgtgagtcctac
ctgcaacttccatccagtctcctctcaccggacaccaacatcagtctacagattgctaca
gatgaggacagtggtgtgttgttgtataaaggggacaatgatcacatcgccatggagctg
tacaggggacgcctcagggtcagctacgatactggatcttaccctccttcagctatatac
agtgtggagacagtgaatgatggtagcttccatgctgtggagttggtagcatcagaccag
actttgtctttgtccattgacggcgggccgcccaaatccattaactccatcagcaaacag
tccacactcaacatagattctccgctttacctgggaggtatgccagaacgcgcctcagcc
tccgggggtctctcgtccatgcagcacagctcaggcggacgcaacggcaccagcttccac
ggctgcctccgtaacctgtacatcaatgggaagctgcaggacctgggggccgggctgggg
acaggggctccaggctccgggactgcacacagcaccaccagacagtggctgggccacggg
gtggagccaggctgccagccctgccagaggggagcctgtgtccagggtgactgccaccca
acagggcatcgtggcttcacctgcacctgccacccgggctggacgggaacagtgtgtgac
cagcaagttaacaatccctgtgatggcaacaagtgtatccatggtacctgccttccaatc
aactcctactcctactcctgtcgctgccagcctggttttgctggtgtactctgtgatgag
caagaccaggatgcagctaacccctgcagtctgtctcgctgtaaacatggcaaatgtaga
gtgtctggcctgggcaaggcatactgcgagtgtaacagtggatatacaggagaggcgtgt
gacagagaggtggcctgccgaggggaacgggtccgagatgtctaccagagacagcaaggc
tacgcggcgtgccaaacccaggagaaggtctcccgcctagagtgtcggggcagctgcccg
gggggagcagaaggacagggcccctgctgcacccccctccgcagcaaacgcaggaaatac
accttccagtgcactgatggctcttcttttgtccaggaagtggagaaagtggtcaagtgt
ggctgtacacagtgttcctcataa
DBGET
integrated database retrieval system
