Sander lucioperca (pikeperch): 116040452
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Entry
116040452 CDS
T07345
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116040452 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluc03019
]
116040452 (zcchc7)
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116040452 (zcchc7)
Messenger RNA biogenesis [BR:
sluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
116040452 (zcchc7)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
116040452 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
eIF3g
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
116040452
NCBI-ProteinID:
XP_031141665
LinkDB
All DBs
Position
4:complement(35878152..35945490)
Genome browser
AA seq
658 aa
AA seq
DB search
MYCTYQDRKELEDDLYQEDEGDSEGSEANSELEFHLYSQLHYSSNAGVLEEQEDRGGEKA
EGQNSQQLEVPEKTVDVDGEQEQTGQSRPSSPDLSELLQHLKNKKGEKSDKQKKGRSDPK
GQRSSSSFFEEVIVIDSSPDVISISDDDTTDDDKGVCALKGRGLNQRQTSTPAQQGTQKR
SLRVPVTVNSSSSESDSEESESKSESSDSSDSDGLENWMILGRGKQDGDQSISLNLEGGS
DSNTDVEEEVGSWLVSAKDKEARIYNKDKGARITVSNRYYTNKNVQCRNCNKNGHLSKNC
PEPKKLPPCFLCGNPGHLVSGCPNKHCNNCGVPGHLYNSCSERAYWRKQCERCSMTGHFS
EACPEIWRQYHNTTKEGPPGKQQRKEHRSRHHPSCYNCSRKGHYGHACKLQRMFNGTYPS
TPFINHYDTAKDIKCRQDWIMSKAKELKKNGFLPACSQTPLTPGPPKKKQKISHHKSNPR
PYHTPHQSPNKPTPKSSHIFFNDNDDFGSAAPKTNNNNKHKQQKGASNVKPWKPKRPVPT
AKDSHPPTKLILDEADDFPRGGGKGEDIVKKRNRLKKTKQVPLAQPEGHRKSRPDRLCWT
VTGEMQGSASKQEKGKRKKRNRARKSADKKGAAQMYPTDENLFIIKQKKKRNRYYESV
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtactgtacgtaccaggatcggaaggagttggaggatgatctctatcaagaggatgaa
ggggactctgaggggtcagaggccaacagcgagctggagttccacctctacagccagctc
cactactcttctaatgccggggtgttagaggagcaggaggatagaggaggagagaaggcg
gagggccagaacagccagcagcttgaggtgcctgagaagactgtagatgttgacggagaa
caggaacagactggacaaagtaggccttcgtcacctgatttgagcgagttactgcagcac
ctgaagaacaagaagggagagaaatctgataaacagaagaaggggagaagtgaccctaaa
ggtcagaggtcgtcatcatcattttttgaggaggtcattgtgattgactccagccctgat
gtcatctccatctctgatgatgacactaccgatgatgataaaggggtctgcgcattaaag
ggccgaggcttaaaccagcggcagacttctaccccggcccaacagggaacccagaaaagg
agtctccgtgtgccagtgactgtgaactccagcagctccgagtcagattcagaagagtcg
gaatcaaagtctgagtcgtcagattcctccgattctgatggtctggagaactggatgatc
ctgggtcgagggaagcaggatggagaccagtccatctcactcaacctagagggagggtct
gacagcaacacagatgttgaagaagaagtgggcagctggttggtttctgccaaagacaag
gaggctcggatctataataaagacaagggtgccaggataacggtgtcaaacagatactat
actaacaagaacgtccagtgtagaaactgcaacaagaacggacatctctccaagaactgc
cccgagcccaaaaagttgccaccctgcttcctttgtggcaacccaggccacctggtcagt
ggatgtcccaataagcactgcaacaactgcggcgtgcctgggcacctctacaattcctgc
agcgagagagcatactggcgcaaacagtgtgaacgctgcagcatgacggggcacttctct
gaagcttgtccagagatctggagacagtatcacaacacaactaaggaaggtcctcctgga
aagcagcaacgaaaagaacaccggagtcgacaccatccctcctgctacaactgctccagg
aaaggacactatggccatgcatgtaaactgcagaggatgttcaatgggacatatcccagc
accccattcattaaccactatgacactgcaaaggacatcaaatgcagacaagactggata
atgtcgaaggctaaagaactgaagaaaaatggctttttacctgcctgttctcagacccct
ctcactccaggaccgccaaagaagaaacagaaaatcagccatcacaaaagtaacccccgg
ccttaccatacacctcaccaaagcccaaacaagcctacccccaaatccagccatatcttt
tttaatgacaacgatgactttgggtccgcagcacccaaaacgaataacaacaataagcac
aaacaacagaaaggcgctagcaatgtgaaaccgtggaaacccaagagaccagtgcccacc
gcgaaagactctcacccaccaactaaactcattttggatgaagcagatgactttcccaga
ggtgggggcaaaggagaggatatagtgaagaagaggaataggttgaagaaaacgaagcaa
gttcctttagcgcaaccagaaggacacagaaagagcagaccagaccgtctctgttggact
gtaactggagagatgcaggggtcagcgtcaaagcaagagaaaggaaagcggaaaaagaga
aatcgagcccggaagagcgctgacaaaaagggtgctgcacagatgtacccaacagatgag
aacctgtttatcatcaaacagaagaagaaacgcaacagatattatgagtctgtttga
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