Sander lucioperca (pikeperch): 116040655
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Entry
116040655 CDS
T07345
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116040655 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sluc03310
]
116040655 (nr1h5)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116040655 (nr1h5)
Nuclear receptors [BR:
sluc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
116040655 (nr1h5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116040655
NCBI-ProteinID:
XP_031142034
Ensembl:
ENSSLUG00000025811
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Position
12:12330220..12347318
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AA seq
496 aa
AA seq
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MREWTELEMSFSAGGFLSASDGYCSTEQLQYYDMLADPLGYPLQDPDLQLLPYSQQQYSP
ANLPFSLYGSPPSSTSSSSSSSQPCHPQYHYSPHCLEAPCDPSPEPHCGGLAQGLGAVGL
SLGRRTRVGSGGKSRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYQCKSG
GGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKGRGQEEEENTESR
RVSSTSKLPGQALSASLTQEQKYIVDRMVEAHRLYRAQDSSHCRLFEFPCTEEVGDLSDV
LSPHLQRLLQFARTVPGFDLLDFSDQSCLLSVSSLEIMFLISAQQFSHNPASCPALQIFR
MTTHNWLRNVESKENIYSRTLVNSGGSEDLLGPVLNFFHSMATLQVTDVEYTLLTATALL
CSALCPCPADRASLQAAGCVEKTQELILDLLSRVCEAQAGAARGGPQRFGRLLGRLTELR
TLRHNYLLLTRQLHGH
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttctgcaggggggtttctctccgcctcg
gatggttactgctccacagagcagctccagtattacgacatgctggctgaccctctgggc
tacccccttcaggaccctgacctccagctgctcccttacagccaacaacagtacagccca
gccaacctgcccttttccctctatggctctccaccttcctccacctcctcctcctcttcc
tcttcgcagccctgccatcctcagtatcactacagccctcattgcctggaagccccctgt
gatcccagccccgagccccactgtgggggcctggctcaggggcttggagcggtgggactg
tccctgggacggaggacacgtgtcgggtcgggagggaagagcagaggccaggaagagctg
tgtgtggtgtgtggagataaagcgtcagggtatcactacaatgctcttacctgcgaggga
tgcaaaggtttctttaggcgtagtgtgacaaaaaaggctgtgtatcagtgtaagagtggc
ggtggctgtgagatggacatgtacatgagaaggaagtgccaagactgtcggctgaggaag
tgccgcgctgtgggaatgctggctgagtgccttctgacggaggtgcagtgccagtccaaa
cgactgaggaaaggaggtaaaggcagaggacaggaggaagaggagaacacagagagcagg
agggtcagctctaccagcaagctacctggacaggctttgtcagccagtttaacccaagaa
caaaagtacattgtggacaggatggtggaggcccatcgactgtacagagcacaggacagc
agccactgcaggttgtttgagtttccctgtacagaagaagtgggggacttatctgatgtt
ttatcaccccacctgcaaagactgctacagtttgccaggacagtgccaggttttgacctc
ctggatttttccgaccagagttgtctcctgtctgtgtcttcactggagatcatgttcctg
atctcagctcagcagttctcccacaacccagcaagctgtccagccctgcagattttcaga
atgacaacacacaactggctgagaaatgtagagtctaaggaaaacatctacagtaggacg
ctggtcaactcaggtggcagtgaggatctcctcgggccagtgctcaacttcttccacagc
atggcaacgctgcaggtgacagatgttgaatacaccctgctcactgcaacagctcttctc
tgctcagctctgtgtccctgtcctgcagaccgtgcgtccctgcaggctgccggctgcgtt
gagaaaacgcaggagctgatccttgacctgctgtccagggtgtgtgaggcccaggctgga
gctgcgcgagggggacctcagcggtttggccgcctgctgggcagactgacggagctacga
accctccgtcacaactacctcctcctgacgagacagctgcatggacactga
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