Sander lucioperca (pikeperch): 116040680
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Entry
116040680 CDS
T07345
Symbol
zeb1a
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116040680 (zeb1a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
116040680 (zeb1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-C2H2_6
Homeodomain
zf-C2H2_15
Homez
zf-met
Motif
Other DBs
NCBI-GeneID:
116040680
NCBI-ProteinID:
XP_031142083
LinkDB
All DBs
Position
9:complement(32753540..32849064)
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AA seq
1130 aa
AA seq
DB search
MADGPRCKRRKQANPKRSSVTDFNNGLEASSDSDDEDKLHIVEEDSLQEPEVANTDGTKM
EDSHGATTSPVLPYNGSLNGVKEEYVSEEEGEADKEPLVEEILQQGDTAVIYPEAPEDEQ
SPAETGGADENGTPDSFSQLHTCPYCSRGYKRNASLKEHIKYRHETSEDNYSCSHCSYTF
TYRSQLERHMSHHRGTREQRHVTHRPTGGSEGKGGTRKFMCTECSKAFKYKHHLKEHLRI
HSGEKPYECSNCKKRFSHSGSYSSHISSKKCAATPNGVPRLPIKSPPPTTQTTPVVIAPA
RMILKEKTDSKPLQEQLPVTQIKSEPVEYECKAMMAAPATSAGTNGVVNGGTAQPAVVPA
ATLPQGMAMVVPAVGLMSPISIHLNDLQNVLKVAMDGNVLRQVLGTANGVVTQGKQGIVV
QQPQQQIISLPAFVDHDGTTKIIINYSISPTAATTATGQPAPLVAKTNPAPPPTVTTAAA
PTPTKTDRPSTPEVADLSIVKAEPESVAIPDIEAATQTEMEPVKTSYAQTAHMPKVNSSS
SCLLCDDCPDNLEALHLLQHRKAANGEAVDSAALDPSFAALLSEAGVTLEEPPVDDLLSL
LKTYFASNAKPSEKELSKISESVRIPVDVVRKWFAKMNSGKNVGKYRSGATAVSKKTETT
SLSLEDASNHNGEAEEDSSQETSNKAPSESGSASPSDSSPLSLNAGDLVIVKSEPEDPDT
PDSQAEPLDLSLPKHIAAALETAQPPAKQQEHPLNLTCLRKEQLDGRTFYVNKTGGPVNI
VTTTQLPTLVAIAGQGAVGCLSAINTTTKRTILIPQLTYTYATTAGSATGAKTVVLNGHT
QGKRLESSSDAVSTVEEQNDSDSAVLMKKRRLENGVYPCDLCSKVFQKGSSLLRHKYEHT
GKRPHECSICKKAFKHKHHLIEHSRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCK
KDGPSSGSGPREAQSELGSPLGTGPQSDSRTTTPPSQMDSDERESEDEDDEAMCMDDIRV
VQVDDGECEIYEGNFEEDEDGEEMAEEDTAGEEEADGDKVDNEFVCDVVEVELEDGHVED
KETEETTEEKEEAESTDTEEVADCEANTDKSIREGSDSAESTEEVVTNAK
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaacccgaagaggagcagcgtg
acagacttcaacaatggcttggaggccagttcagactcagacgacgaggacaagctacac
attgtggaggaggacagtctgcaggagcccgaggtcgccaacactgatgggaccaaaatg
gaggacagccatggcgccacgacaagcccagtattaccctacaacggctccttaaacgga
gtgaaggaggagtatgtgtcagaagaggaaggggaggctgacaaggaacctctagtggag
gagatcctccagcagggagacacagccgtcatctatcctgaagcccctgaggatgagcag
agtccagcagagacaggaggcgctgatgaaaacggcacaccagattccttctcccagttg
cacacctgcccatactgctcacggggctacaagcgcaacgcctcgctgaaggagcacatc
aagtatcgccacgagaccagcgaggacaactacagctgctcgcactgcagctacacattc
acgtaccgctcacagctggagaggcacatgagccaccacaggggcacaagggagcagcgt
cacgttacccaccggccgacaggtggatcagaaggaaaaggtggaacccgcaagttcatg
tgtaccgaatgttccaaggccttcaaatacaagcaccacctgaaggagcacctgcgcatt
cacagtggtgagaaaccatatgaatgctcaaactgcaagaagcgattctcccactcaggt
tcctacagctcccacatcagcagtaagaagtgtgcagcaacccccaatggcgtccctcga
ttgccgatcaaatctcccccacccaccacccagaccacaccggtcgtaattgctccagcc
cgcatgattctcaaagagaagactgacagcaagcccctccaggagcagctccccgtcacc
cagatcaaatcagaacctgtggaatacgagtgcaaggccatgatggcagcaccagcaact
tcagctggtaccaacggggtggtgaacggagggacggcacagccagctgtggttccagct
gcaaccttgcctcagggcatggctatggtggtgccagccgtcggcctcatgtcgcccatc
agcatccacttgaacgacttgcagaatgtgctcaaagtggcgatggatggaaacgtgctc
aggcaggtgctgggcacagctaacggggtggtgacgcagggaaagcagggaatcgtagtt
cagcagccccagcagcagatcatcagcctgccagcctttgtggatcacgacggcaccacg
aagatcatcatcaactacagcatcagccccacagccgctaccactgccacgggccagcct
gcaccgcttgttgccaaaaccaatcctgctccccctcccactgtcaccactgctgcagcc
cccacccccaccaagacagacagaccctcgacaccagaggtggccgacctctccattgta
aaggccgagcccgaatcggtagccatcccagacattgaggcagccacacagacagaaatg
gaacctgtcaagacttcatatgcccaaacagctcatatgccaaaagtcaacagctccagt
tcgtgtttactctgcgatgactgtcccgacaacctggaggcgctacacctcctccagcac
cgcaaagcagccaatggggaggccgttgactcggccgcgttggacccctcgttcgccgct
ctgctcagcgaggcaggggtgacgctggaggagccacctgtggacgacctgctctcactc
ctcaagacctactttgcctccaatgccaaacccagcgagaaggagctgtcaaagatctcg
gagtctgtcaggattcccgtggatgtggtcagaaagtggtttgccaagatgaactctggg
aaaaatgtgggcaaatatcgcagtggcgctacagcggtttccaaaaagactgaaaccacg
agtctcagcttggaggacgcctcgaatcataacggtgaggcagaggaggacagctcccaa
gaaacctccaacaaagccccatccgaatctggcagcgcatctccgtcagactcctcacca
ctaagcctcaacgccggggacctcgtcatcgttaagagtgagccagaagacccggacacc
ccggactcccaggccgagccgctcgacctctccctccctaaacacatcgcagcagcattg
gagacggcccagccccccgccaagcagcaggagcaccccctgaacctgacctgcctgagg
aaggagcagctggacgggcgaaccttctacgtcaacaagaccggagggcccgtcaacatc
gtcactaccacacagctgcccacgttagtggccatcgctggtcagggcgcggtgggctgt
ctcagcgccatcaacaccacgaccaaacgcaccatcctcatcccccagctcacctacacc
tacgccactacggccggcagcgccaccggagcaaagactgtcgtactgaacggccacacg
caggggaagaggctggagagcagctctgatgccgtctccacggtggaggagcagaacgac
tcggactcagccgtgctgatgaagaagcggcggctggaaaacggcgtctacccgtgtgac
ctttgctccaaagtcttccagaagggcagctccctgcttaggcacaaatatgaacacaca
ggaaagcggccccacgagtgcagcatctgcaagaaggccttcaaacacaaacaccacctg
atcgagcactcgcggctgcactccggtgagaaaccctaccagtgcgataagtgcggcaag
cgtttctcccactcgggctcatactcccagcacatgaaccaccgctactcctactgcaag
aaggacgggccgagctccggctcgggcccacgcgaggctcagtcggagctcggcagcccc
ctcggcaccgggccgcagtcggacagccggaccacgacccctccctcccaaatggactca
gatgagagggagagcgaggacgaggacgacgaggcaatgtgcatggacgacatccgggtg
gtgcaggtggacgacggcgagtgtgagatctacgagggcaactttgaggaggacgaggac
ggcgaggagatggcggaggaagacacggccggagaggaagaggcagacggagacaaggtg
gacaacgagtttgtttgtgacgtggtggaggtcgagcttgaggatggtcacgtggaggac
aaagagacggaggaaacgactgaagagaaggaggaagcggaaagcacggatacagaggaa
gtggcagactgtgaagcaaatacggacaaaagcatcagggagggctcagacagtgctgaa
tccacagaggaagtggtgacaaacgccaaataa
DBGET
integrated database retrieval system
