Sander lucioperca (pikeperch): 116040733
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Entry
116040733 CDS
T07345
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116040733 (sort1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
DUF6242_C
Motif
Other DBs
NCBI-GeneID:
116040733
NCBI-ProteinID:
XP_031142188
Ensembl:
ENSSLUG00000006123
LinkDB
All DBs
Position
12:complement(5634504..5651213)
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AA seq
821 aa
AA seq
DB search
MGLLLHCVLLLSVFTFTASLDVQQGSEPFGQSFFLKHSNIGKRAANIVKRSLPAWLAASP
GHKIKRRSTEQGDSCKALQGSDTKLADNTHSYTFKDLSGSVSLAWVGDGTGVILALTTFQ
VPFFMIRLGQSKLYRSENYGKTFEDVTNLINNTFIRSEFGIAIGNSGKVILTGEVSGGHG
SRIFVSDDFGKTFTPRDLPFNPLMQITYNPDNSNVLLVLSNSYELWLSEDFGSNWKKIHD
TVCLVKWGRKNTIFFTANHNGSCTDRGMLELKRSTDYGKTIKTVANKIYSFGLGGRFLFA
SVMTGKGTLRMIYVSVDQGETWNMAQLPPVGHEQFYSILGANDEMVFMHVDEPGDTGFGT
IYVSDDRGTVYSKSLERHLYTTTNGDTDFTNVTSLRGVFITSVLAEDNSVQSVVSFDQGG
EWVPLRKPANSKCDATAKDPDKCSLHIHAAYSIAMKLNVPMLPLTEPNAVGLILAHGSVG
DAISVMKPDVYVSDDGGYTWMKALDGPHHYAILDSGGLLVAVEQSPTQPINVIKFSTDEG
QCWRAYTFTKEPIYFTGLASEPGARSMNVSVWGYRDSLLSQYWISITIDFRDLLTRDCDD
KDYVQWLAHSDDISDPNDGCMLGYKERFLRLRKDSVCWNGRDYQVNTQPTPCPCTLDDFL
CDFGYYRQENSSECVEQPDLKGKVLEFCLHGKEELLQTSGYRKIPGDKCEGGNMPERKEI
DLSKRCVSDLVGPELLIDSRSSKSVPIVMTVIVVMLLIIAAGVVFIKKYVCGGRFLVHRY
SVLQQHVEENAVDGMDDPLETNHTQNGKIEFHDDSDEDLLE
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgggacttttgctgcactgtgtcctgctgttatctgttttcactttcacagccagttta
gatgttcagcagggatccgaacccttcggacagtcgttttttttaaagcattcaaacatt
ggcaagagagctgcgaacatcgtaaagaggtctctgcctgcctggctggctgcatcacca
ggtcacaagataaaacgaagaagcaccgagcagggcgactcctgcaaagctcttcaagga
tctgacaccaagttagcagacaacacccacagttataccttcaaagacctgagtggatca
gtgtcgttggcctgggttggagatggaacaggggtcatcctggctttgacaacttttcag
gtgcccttcttcatgataagactcgggcagtccaaactctatcgaagtgaaaactacggg
aagacattcgaggatgtgaccaacctcatcaacaacaccttcatcagatcagagtttggc
attgctatcgggaactctgggaaagtgatcctgacaggagaggtgtctggaggtcatggg
tctcggatctttgtctccgatgacttcggaaagacattcaccccgcgggacctgcccttt
aaccccctgatgcagatcacgtacaaccctgacaattccaatgtgctgctggtcctcagc
aacagctatgaactgtggctgtctgaagattttggcagcaactggaaaaagatccacgac
acggtgtgtcttgtgaaatgggggaggaaaaataccatcttctttacagccaaccacaac
ggatcctgcactgatcggggaatgctggaactgaagaggtcgacagactacggtaaaacc
attaagactgtcgccaataagatctactccttcggcctgggtggacgcttcctctttgcc
tctgtaatgacaggcaagggcactctgaggatgatctacgtgtcagtggaccagggtgag
acgtggaacatggcccagctgccccctgttggtcacgagcagttctactccatcctggga
gcgaacgatgaaatggtcttcatgcatgtcgacgagccaggagataccggattcggcacc
atttatgtgtcggatgaccggggcactgtgtactccaagtcattggagcgccacctttac
accaccacgaatggcgatacagacttcactaacgtcacctccctgcgaggagttttcatc
accagtgtcctggcagaagataattctgtgcagtctgtggtgtcgtttgatcagggaggg
gaatgggttcccctgcggaaacctgccaacagcaagtgtgatgctacagccaaagaccca
gacaagtgcagtctccacatccacgcagcctacagtattgctatgaaactgaatgtcccc
atgctgcctctgactgaaccaaacgctgtgggtctcatcttagctcatgggagtgttggt
gatgccatctcagtgatgaagcctgatgtgtatgtgtctgatgatggggggtacacctgg
atgaaggccctcgatgggccccatcactatgccattttggactctggagggctgctggtt
gctgtggagcaaagccccactcaacctatcaacgtgatcaaattttctactgatgaagga
cagtgctggcgtgcttacaccttcaccaaagagcccatctactttactgggctggcatca
gagccgggagctcgatccatgaatgtcagtgtctggggctacagagactccctgctcagc
cagtactggatctccatcaccattgacttcagggatcttctcactagagactgtgatgac
aaggactacgtgcagtggttggcccactctgatgacatcagtgaccccaatgatggttgc
atgctgggctacaaagagaggtttctgcgtctcaggaaggactctgtttgctggaacgga
cgagattatcaggtcaacacccagccaaccccgtgtccgtgcaccctggatgacttcctg
tgtgattttggatactaccgtcaagagaacagctcggagtgtgtggagcagccggacctg
aaaggcaaagtgcttgagttctgtctgcacggcaaagaggaacttctgcagaccagtggc
tataggaaaatccctggagataaatgtgagggaggaaatatgcccgagcgtaaagagata
gacctcagtaagaggtgtgtgagtgacctggtgggccctgaacttctgatagacagtcgc
tcctccaagtctgtacccattgtgatgacggtcatcgtcgtcatgctgctgatcattgca
gccggagttgtcttcatcaagaaatatgtttgtggtggcaggttcttggttcacagatac
tcggtgctgcagcagcatgtcgaggaaaatgctgttgatgggatggacgacccgctggag
accaaccacactcaaaatggcaagatagagtttcatgacgactcagatgaggacctgctc
gaatag
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