Sander lucioperca (pikeperch): 116040743
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Entry
116040743 CDS
T07345
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00310
Lysine degradation
sluc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
116040743 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116040743 (prdm2a)
03036 Chromosome and associated proteins [BR:
sluc03036
]
116040743 (prdm2a)
Enzymes [BR:
sluc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
116040743 (prdm2a)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116040743 (prdm2a)
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
116040743 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_11
zf-C2H2_6
zf-C2H2_ZNF462_1st
Motif
Other DBs
NCBI-GeneID:
116040743
NCBI-ProteinID:
XP_031142204
LinkDB
All DBs
Position
12:7765373..7775974
Genome browser
AA seq
1410 aa
AA seq
DB search
MEDSSHLYISEFGDNEEDMEEEEEEEEDDDDDDDDYIYQEETNMESDVIKSLYPDRHKHP
NQDTERDWSSFPCQHCERHFTSKQGLEQHMHIHALVNNETHANTSNKSNTSFGSNLGPLQ
HEKMKPLDSVGSVMQLHTSSPTSSNTSILSAGDHTAQPDKLGVLEGHHACKYCEKIFTTH
TNKRRHEHRTHEQHLQVTDVEKTQLPQEENLQRILSEKSQQETELGDNTAPAAVVENIVE
HAEQYMLDVSSNISENLSFYIDGKIVSTSTVSSCEAAEVHSGSSAIVGLDALILDPTQIS
QVLNTDSVTGKEIPGQPLAKRRTATPPLLPQIKTELESEVVVSSSSSSLVSSLIENLHPQ
NTESTVVQKERTVFLSPKLKQLLEKQDGLKPTLALIADGQKPCSPVSLAAVPAGSGRFKR
RTGSPPSSPQQNPTSKEETPDTGYCDAASTGQMETQHSSPVHQTANVQDDTTPPVEEPAL
TPTLTESWPPATGGNSCNQQPLDLSNTVKSSGDVAVADAVLDLSLQKKTLGDSEPTLNLV
SQAILKEGQSCMVETALMNIGEQNVSLGNLETPLVTDFTIFTGPDMMTQLEPMAEGLVYG
LALPSDSLTPSPASLPPTPVAMQPASPCTIAFASPASHTALPTAPSLITVLAPPHISNPS
SQPIQVLAPNISSEPLVICTENALHFSECDLTTAFATANSANPVTLSQSFDPNLNLPGHV
FLSDPLALNTPIVESTPMSEVPFTPTVTLTDSLINSYNITSNTVLIECTIALEAPGSIVP
AAVTLQENTAESPAPTQMVVNHIEQQKIVSMPNPQTVDPTVLMSSISESVTLSTTASLIS
DCPTVGESSPDPEPVVNTESPTIKEEEPADSTVSIPTISSKTSPSSEKAVEDESLNNIPS
DAQQQTFTKNFICNVCDNLFHSMKELGHHVGDHADEWPYKCEFCVLLFSKPSALLDHRLS
LHGVGKTYVCSACAKEFVYLCNLKQHQEELHPGQQCTYTEDEKGKLRPQNYNNSAKVNAQ
PSVPDAAEEAKKMVKKEEGEVDMAAEELFTTIKMMASDGAKVKGPDVRLGINQHYPSFKP
PPFPYHNRSPAGSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASD
KRRYTPKRNPIPLRHFAKTQNGVLSTTNSTNGLNASNKPSQSNRSKPNQESPVNVKFKVL
NKKKKKLVQRVMPQRNKPVPSSNKMSPAQVDEQQEIFVCPHCSREFTMRRSRTKHMAVCP
KKPKEVKKRKEGGISVTKENNRHLHRGVEEKQQASPQHKTRLQTSGPAKRSAILPVQTVF
SNKRSKIIIKESMQPKQETPTLNELPIVRTFNPSMRQYSRVQHNVKGIPIKITIVKPQQA
APQKDELPPAQSREEATGAVTNSSEQSPTA
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atggaggactcgtctcacttgtacatctctgaatttggagacaatgaggaggatatggag
gaggaagaggaggaggaggaggacgacgacgacgacgacgacgactacatttatcaagag
gaaactaacatggaatcagacgtgattaagtcactgtacccagatcgccataaacatcca
aaccaggatactgagagagactggagctcttttccctgccagcactgtgagagacatttt
accagcaaacaaggcttagaacaacacatgcacatccacgctttggtgaacaatgagaca
cacgcaaacacaagcaataagagcaacacatcttttggttcaaatctgggtccgctgcag
catgagaagatgaagcctctggattcagtaggctccgtcatgcagcttcatacttcatcc
cccactagctctaatacttccattttgtcggctggtgaccacactgctcagccagacaaa
ctgggagtattagaggggcatcatgcttgcaagtactgtgaaaagatattcactacacat
accaacaagcgacgacatgagcacaggacccacgagcagcacctgcaagtcactgatgtg
gaaaaaacccagctgccccaagaggaaaatctccagaggatactcagtgaaaaatctcaa
caggaaacagagcttggtgacaatacagcacctgcagctgttgtggagaatatagtggaa
catgcagaacaatacatgctagatgtctccagcaatatttcagagaatctgagcttttat
attgatggaaagatagtgtcaacaagtacagtcagtagctgtgaagcagctgaagttcat
tctgggtcttcggctatagttgggctggatgccctgattctagaccccactcaaatcagc
caggttttaaatacagattcagtaacaggcaaagagatacctggtcaaccactggccaag
agaagaactgcgacaccacctcttttaccacaaattaaaactgaactggagtctgaggtg
gttgtgtcgtcttcctcatcttcactcgtatcttctttgatagagaatctacatcctcag
aatacagagtctaccgttgtgcagaaggaaagaactgtgtttctgtctccaaagctgaag
cagctcctagaaaagcaggatggccttaaacctacacttgccctcatcgcagatggccag
aagccttgttcacctgtctctctcgctgccgtgcctgctggatcaggaaggtttaaaaga
aggaccggatctccaccaagctctccccagcaaaacccaacatctaaagaagaaacacca
gacactggatattgtgatgctgcaagtacagggcagatggagacccaacatagttcacct
gtgcaccaaacagccaatgtgcaggatgacacaactccacctgtggaggagccagcactg
acacctaccttgacagagagctggcctcccgcgaccggcggtaactcctgtaaccagcag
ccactggatctctctaatacagtcaaaagcagtggagatgtagctgtagctgatgctgtg
ctggatttgagtttgcaaaaaaagacccttggtgattctgaaccgacattaaatttagtt
tcacaggcaattttgaaagaaggacaatcatgcatggtggagacagccttgatgaatatt
ggagagcaaaatgtaagcctagggaatcttgagacccctttagtcacagacttcaccata
tttacaggtccagatatgatgacccaattggagcctatggcagaaggacttgtttatgga
cttgcacttccctctgattctctgactccatcacctgcctccctccctcccacccctgtt
gctatgcagccagcttcaccatgcacaatagcatttgcttccccagcctcacacacagca
ctccctactgctccttcattaatcacagttttggcaccaccacatatttctaatccttca
agccaaccaatccaggtattagccccaaatatatcttcggagcccctggtaatttgcacc
gaaaatgcattacatttttcagagtgtgatttaactactgcatttgccaccgcaaattct
gcaaatcctgttactctctcccagtcctttgatccaaatctaaatctacctggccatgtg
tttctctctgatccactagctcttaatacgcctatagttgagtccactcctatgtcagaa
gtgccatttacgcccactgtaactttaactgattcactcatcaactcttacaacattacc
agcaacacggtgttgatagagtgcacaatagctcttgaagccccagggagtatagtccct
gctgcagttaccttacaagaaaacactgctgagtctccagcacctacacagatggttgtt
aatcacatagaacagcaaaagattgtatcaatgcccaatcctcaaactgtggaccccact
gttcttatgtcctccatctcagaatcagtaactctatccaccaccgcctcactgatatct
gattgtcctactgtgggtgaatcaagtcctgacccagagcctgttgttaatacagagtca
ccaaccataaaagaggaggaacctgctgacagtactgtttccatacccacaatctcatct
aagacctcaccttcttctgagaaagcagtagaggacgaatccttaaacaacataccaagt
gatgcacaacagcagactttcaccaagaattttatctgcaatgtgtgtgataatcttttc
cattcgatgaaagaactaggccatcatgtaggtgaccatgctgatgaatggccctacaaa
tgtgagttctgcgtgctgctcttcagcaaaccctccgctttgcttgatcatcgattaagc
ctccacggcgtcggcaagacttacgtttgcagcgcatgtgcaaaagaatttgtctacctt
tgtaatctgaaacagcatcaggaagaattgcatcctggccagcagtgtacgtacacagaa
gacgaaaagggaaaactaagacctcagaactacaataactcggcaaaagtcaacgcgcag
ccctcggtgcccgatgccgcagaggaagccaagaaaatggtgaaaaaggaagaaggtgaa
gtagacatggcggctgaagaactgtttacaacaataaaaatgatggcctcagacggagcc
aaagtcaaagggcctgatgttcgtcttggcattaaccaacattatcccagctttaagccc
cctccatttccttaccataacagatcacctgctggctcagtggcttcagccacaaacttc
accacccacaacatcccacaaacctttagcacggctattcggtgcaccaagtgtggaaag
agctttgataacatgccagagttacacaagcatatcctggcttgtgcaaatgccagcgat
aaaaggcgatacacgcccaaaaggaatcctatcccacttcggcactttgcaaaaactcaa
aatggagttctgtctaccaccaattctactaacggactaaatgcttcgaacaagccgagc
cagtcaaacagatccaaacctaaccaagaatcaccggtgaatgtgaagttcaaggtgttg
aacaaaaagaagaaaaagttggtccaaagggtcatgccacagaggaacaagccagtccct
tcatcaaataaaatgtcacctgcacaggtggatgagcagcaggagatctttgtctgccca
cactgtagcagggagttcacaatgcgtcgcagcagaaccaaacacatggcagtctgcccc
aagaaaccgaaagaggtgaagaaaaggaaagaaggaggaatctctgtgacaaaggaaaat
aatagacacctgcatagaggggttgaagagaaacaacaagcctcgcctcagcataaaaca
agactccagacttctggccctgctaaaaggtctgccatcctaccagtgcaaactgtcttt
tcaaacaaaagaagtaaaataattataaaagagagcatgcagccaaaacaagagacaccc
actctgaatgaacttcccattgttcgcactttcaacccctctatgcgccagtacagcaga
gtgcagcataacgtcaaaggaatccccattaaaatcaccatagtgaaaccacaacaggct
gcaccacagaaggatgagctgcctcccgcccagagccgagaggaggcaaccggagccgtt
accaacagctctgagcagagtcctacagcctga
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integrated database retrieval system
