Sander lucioperca (pikeperch): 116040751
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Entry
116040751 CDS
T07345
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116040751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116040751
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116040751
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116040751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-B_box
ANCHR-like_BBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
RING_XB3-XBAT31
U-box
zf-RING_5
zf-Nse
Zn_Ribbon_YjdM
Flavi_propep
Motif
Other DBs
NCBI-GeneID:
116040751
NCBI-ProteinID:
XP_031142228
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Position
12:13888377..13893806
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AA seq
545 aa
AA seq
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MSFSKPEDQLVFELSCPICLQLFSDPVVLTCGHNYCRACIWKTADKRDTTLPRCPECRME
YQGVESLQKNFKLSSIIEGYRATTPQLYSRKPETEPEKTEVFCDHCIDEQSLAVKTCLKC
EVSLCPRHLQRHHEKAAFRAHTMVEPLNELGLKSCATHRLALEYFCSNDMTLMCSTCYTG
GHHQNHDVLTFSLAEEEMRRALESCTKGVSSRLLKTESLLQRTAEEQGASEASGDRVVNK
AVTVMDGMAALVDRYKGRLCAILEEERDQCRKRRLLGLSALKERQQKLMEAQRCATQALS
ETDTCIFIHRFMLIEHKLREVVTDTVPSTIPSKVPLNTKRLQASLKTQDFRSDMTRLLNS
LHLLLSPLDLTFNLCTAHPSLIVSNDLHTVKYSPTKQSYAEHPERFTSAAQVLCRQGFSS
GVHIWVVEVGSNSMWSLGVCYKSIPRRGDHSRLGHNSVSWRLQWKNNKLTGCQSSCTVAL
GEMANHLLRIEIVLDYEAGTLMFHNIKGHREHLHTFRAVFKEQVYPAFSIHSNTPESWIT
LHSGM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctccaagccagaggatcagctagtcttcgagctgagctgccctatctgcctt
caactgttctctgatccggtggttctcacctgtggacacaactactgccgagcctgcatc
tggaagaccgccgacaagagggacacaacccttccacgttgcccagagtgccgcatggag
tatcagggtgtggagtccctgcagaaaaacttcaaactctccagcatcatcgaaggttac
cgagccaccacaccacagctgtacagcaggaagcctgagacggagcctgagaagacggag
gttttctgcgaccactgtatagatgagcagtcgctggctgtgaagacctgcctgaaatgt
gaagtgtctctgtgtcccaggcaccttcagagacaccatgagaaggcggcgttcagggca
cacactatggtggaacccctgaatgagctggggttgaagagctgtgccactcaccggctg
gcccttgagtatttctgttccaacgacatgactttgatgtgcagcacgtgctacacagga
ggccatcaccagaaccacgatgttctcaccttcagtctagccgaggaggagatgaggcga
gcgctggagagctgcaccaagggggtttctagcaggctgctgaagacagagagtctccta
cagaggacagcagaggagcaaggagcctctgaagcttcaggggacagagtggtcaacaag
gctgtcactgtcatggacggaatggctgcactggtggacaggtacaagggacgtctatgt
gcgatattggaggaggagagagaccagtgcagaaaacgcaggctcctcggactgagtgca
ctcaaagagcgacagcagaagttaatggaggcgcagcgatgtgccacacaggccctcagt
gagacagacacctgcatcttcatacacaggttcatgctgattgaacataagctgagagaa
gtcgtcacagacacagttccctccacgatcccctcaaaggttccactgaacaccaagcgt
ctccaggcaagcctcaaaacccaagacttccgctcagatatgacccgcctcctgaattcc
ctccacctcctcctgagccccctggacctcaccttcaacctctgcactgcccaccccagc
ctgatagtctccaatgatctgcacacagtcaagtacagccctaccaagcagtcatatgca
gagcacccagagcgttttacaagcgctgcccaggttctttgcaggcaggggttttcgagt
ggcgtgcacatatgggtggtagaagtgggctccaacagcatgtggtcgctgggtgtgtgt
tacaagagcatcccccgccgtggtgaccacagtcgtttaggacacaactctgtttcctgg
cggctgcaatggaaaaacaacaagctgacagggtgccagtcctcgtgcactgtggctctg
ggggaaatggccaatcatctgctgaggattgagatagtgctggactatgaggctggaaca
ttgatgttccacaacatcaaaggacacagggagcacctccacaccttcagggctgtgttt
aaggagcaggtttacccagcgttcagtatacattcaaacacaccagagtcctggatcaca
ctgcacagtgggatgtaa
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