Sander lucioperca (pikeperch): 116040778
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Entry
116040778 CDS
T07345
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04120
Ubiquitin mediated proteolysis
sluc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116040778 (ube4b)
04120 Ubiquitin mediated proteolysis
116040778 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sluc04121
]
116040778 (ube4b)
Enzymes [BR:
sluc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116040778 (ube4b)
Ubiquitin system [BR:
sluc04121
]
Ubiquitin ligases (E3)
U-box type E3
116040778 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
116040778
NCBI-ProteinID:
XP_031142271
Ensembl:
ENSSLUG00000000286
UniProt:
A0A8C9WY05
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All DBs
Position
12:6501333..6524336
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AA seq
1378 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGAVPQPLPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TVSCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFHQNPKDVYSDFKDLIGQILMEVLMMSTQSRVHNPFASLTATS
QPIAAKSADHRLTLVQPSSQAGSPMGPSAGSFGASSLSSLYGCGSPQSMALDAAKRTSPS
LPTPTPPSVPSTPSTPQFIVPPSPPATATPRHTLNPPSAPMPISQRYRPYSVSSPLGAPS
PSSPGQRGFSFFGPSPSPAGPSVPPNTPVPVPPPSPQSLSLISPRARNQPSSTPPPMVPP
SPRSNTRQAAFASRIPPSSPLSVLFFALSDMSQDSSDEDSEEEEDFSRVQFGSSLGACGV
GMSCESASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCI
SHVALVLQGALTQPRSPLHQSLLVPYLLCRNLPYGFIQELVRITHQEEEVFSQIFIPILH
GLALAVKECSFDSDNFKFPLMALAELCEIKFGKAHPVCNLATSLPLWCPKPLSPGCGREI
QRLSYMGAFFSLSVFAEDDTKVGDKYFSGPAITIENTRVVSQSLQHYLESARGDLFKVLH
NILLNGETREWALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLET
VDPYYIFHPRCRLVVSLEETRLKATMEELKSWMAELHEDPTKFSEPKFPTECFFLTLHTH
HLSILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVR
AKACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNINLPLHPEIPKSFAALPEFYV
EDVAEFLLFVVQYSPQVLYEPCVQDIVTFLVVFICSQNYIRNPYLIAKLVEVLFVTNPAV
QPRTQRFSEMMENHPLSVKQLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQ
NLAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWEQLP
REQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNL
QQLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEE
VISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPV
ILPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHTWMREKQGGRPV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagatgagatccgcagaaggcgactggcacgactggcaggggga
cagacatcacaacccagcacccctctcagcacacccctgacatccccacagagagagact
cccccaggacccctccctggaccctcaggtgccgtcccccagcccctgccaccagctgcc
tctcaatcattgggtctcaatgtccacagtggtaccccagccacatctcctatgggcacc
tccggtgtggcatatggtagtcagagcagcgagggtgtgagctccctctccagctccccc
tccaacagccttgagactcagtcccagagtctgtctcgatcgcagagcatggacattgac
actgtctcctgtgaaaagagcatgtcccaggtggatgtggactcagggatagagaacatg
gaggtggaggacagcgatcgcagggagaagaggaacttgactgaaaaggaaacctctgca
aactcagatgtctcagaagaacaggcgctgcagctcatttgtaaaatccttcgcgtatcg
tggaaggagcaggatagagatgtcatcttcctcccttcactagctgcagagttccaccag
aaccctaaagatgtgtactctgacttcaaagacctgattggccagatcctgatggaagtc
ttaatgatgtccacccagtcacgtgtccacaaccccttcgccagcttgaccgccacctct
cagccaattgcagccaaatccgccgaccaccgtctgacgctggtgcagccctccagccaa
gctggcagccccatgggccccagtgcagggtcttttggagccagctctctgtccagtctg
tatgggtgtggtagtcctcagtcgatggctttggatgcagccaagaggacctccccatct
ctccccacccctactccaccttctgtaccttccacaccctctaccccacaattcattgtg
ccccctagcccacctgctactgctactccgagacacactctcaaccctccatctgctcca
atgcccatctcccagcgctatcggccttactctgtctcctctcccttgggggctccttcc
ccatctagcccgggtcaaagaggatttagcttctttggaccctctcctagccctgcaggg
ccctctgttccacctaacaccccagttcctgtgccaccacccagcccccagtccctctcc
ttgatctcacctagggctcgcaaccaaccatcctccacaccccctcccatggtgccccct
tctcccagatcgaatacccgacaggctgcctttgcttccaggatcccaccgtctagcccc
ttgtcggtcctgttctttgccctctctgacatgtctcaggacagcagtgatgaagattct
gaggaggaggaggatttttcacgggttcagtttgggtccagtcttggtgcatgtggagtg
gggatgtcctgtgaatcagcaagcgaccgcttcaccattgaagcatgcaaagagacagag
atgctgaactacctcattgagcgttttgacagtgttggcatggaggagaggaaagctcct
aagatgtgtagccaaccaaatgtcagccagcttctcagcaacattcgctctcagtgtatt
tcccatgttgccctggtcctgcaaggcgccctgacccagccgcggagccctctccatcag
tctttgctggtaccttatctgctgtgtcggaaccttccttatggctttattcaggagctg
gtgcgcattacccaccaagaggaagaggttttcagtcagatcttcattcccatcctccat
gggctggctcttgcggtgaaagaatgctcctttgacagtgacaactttaaattccccctt
atggcattagctgagctttgtgaaatcaaatttggaaaggctcacccagtgtgcaatttg
gcaacttcactgcctctgtggtgtcccaaacctctgagccctggttgtggcagagagatc
cagagactgtcctacatgggagccttcttcagcctctctgtgtttgccgaggatgataca
aaagtaggagacaagtatttctctggcccagccatcactatagagaacacgcgagtcgtc
agccaatcattgcagcactacctggagtcagcaaggggtgacctattcaaagttctccat
aacatcctactaaatggagaaacgcgtgagtgggctcttaattacatggcagctctggtc
aactacaatgtgaagaaagctcagatgcagactgatgacaagctggtgtcgacagacggc
ttcatgctcaacttcttatgggtgctgcaacagctgagcatgaagatcaagctggagaca
gtggacccttactacattttccacccacggtgtcgccttgttgtcagcctagaggagacg
cgtctgaaagccaccatggaggagctgaagagctggatggctgaactgcatgaagacccc
acaaaattctcagaacccaagttccctaccgagtgtttcttcttgacactgcacacccac
catttgtcaatcctacctggctgcagacgttacatccgcaggttgcgagccatccgtgaa
ctgaacaggactgtagaggagctgaagaacagtgaaagccaatggaaagattctcccctg
gctagtcgacacagagagatgcttaagcgatgcaaaacccagctcaagaaactggtgcga
gccaaagcttgtgctgacgtgggccttctggatgagaacttgctccgcagatgtctgcag
ttctacagcacagtcatccagctcattcttcgcatggtggaccctgcctacccgaacatt
aacctgccgctgcaccctgagattcccaaaagctttgctgctctgcctgagttctacgtt
gaagatgtggctgagtttctgctttttgtcgtgcagtattctccccaggttttatatgag
ccgtgcgtccaggacattgtcaccttcttggtggtgttcatctgcagccagaactacatc
aggaacccctatcttatcgccaagttggtggaggtgttgtttgtcaccaaccctgctgta
cagcctcgtactcaacgattctctgaaatgatggagaaccacccgttgtcggtcaaacag
ctggtccccgccctcatgaagttctacactgatgttgagcataccggcgccaccagtgag
ttctatgataagttcacgatacggtaccatatcagcactatcttcaagagtctctggcag
aaccttgcccaccatggcaccttcatggaagagttcaactctggcaagcagtttgtgcgc
tacatcaacatgctgattaatgacaccaccttcttgttagacgagagcctcgagtccctg
aagcgtatccacgaagttcaagaagagatgaaaaataaggagcagtgggaacaactgcct
agggagcagcagcagagccgccaatcccagctgactcaggatgagcgggtatctcgctcc
tatctggccctggccacggagacggttgaaatgttccacatcctcaccaagcaggtccag
aagcctttccttaggcctgaactggggcctcgtttagctgccatgctaaactttaacctc
cagcagctctgtggtcctaagtgtcgggacctgaaggtggagaaccccgagaagtatggc
tttgagcccaagaagctcttagaccagctgactgacatctacctgcagctagactgtgcc
cgctttgctaaagcgattgcagatgaccagcggtcgtacagccgcgagctctttgaagag
gtgatctcaaagatgaggaaggctggtattaagtcctctattgccattgaaaaattcaag
ctgctatctgagaaggtggaggaaatagtcgccaagaactctcaatctgaaatggactac
agtgacgcacctgacgaattcaaagaccctctgatggacacactgatgactgaccctgtg
atactgccttcggggaatatcatggaccgatccatcatcttgcgccacctgctgaactcc
cccactgatccctttaacaggcagccactcacagagagcatgctggagtcagtccctgag
ctgaaggagaggatccatacctggatgagagagaaacagggtggacggcctgtctga
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integrated database retrieval system
