Sander lucioperca (pikeperch): 116041041
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Entry
116041041 CDS
T07345
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc03460
Fanconi anemia pathway
sluc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116041041 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116041041 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116041041 (her9)
03400 DNA repair and recombination proteins [BR:
sluc03400
]
116041041 (her9)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116041041 (her9)
DNA repair and recombination proteins [BR:
sluc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
116041041 (her9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
116041041
NCBI-ProteinID:
XP_031142713
Ensembl:
ENSSLUG00000001673
UniProt:
A0A8D0CQD3
LinkDB
All DBs
Position
12:complement(6309847..6311711)
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AA seq
291 aa
AA seq
DB search
MPADTMEKQTASPIAGAPANGAHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSADATVLSKYRAGFNECMNE
VTRFLSTSEGVNTEVRSRLLSHLSSCMGQMMSMNYTQQAASQQAHLAQPLHVQLPSTLPI
NSAAMGSKLSPAEAVSPKVFGGFQLVPATDGQFAFLIPNPAFASTTGPVIPLYANAGVPV
AVNASPVHGSSAPTAASPVHGMTSFSGGSQAVSPVGVSTGSEGNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacactatggaaaagcagacggcatcccctattgccggtgcccctgcaaac
ggagcacacacaccggacaaaccgaaaaatgccagcgagcatagaaaatcatccaaaccg
atcatggaaaaacgccggagagcaagaataaacgaaagccttgggcagctcaagactctc
atcctggacgcacttaaaaaagatagctccagacactccaagttggagaaagcagatatc
ctagagatgacagtgaagcacttgaggaacctgcagcgtgtacagatgagcgcagcactc
tcagcagatgccacagtactcagcaaatacagagctggattcaacgaatgcatgaacgag
gtcacccgcttcttatccacctccgaaggggtgaacacggaggtgaggtcgaggctcctc
agccacctctccagctgcatgggccagatgatgtccatgaactacacgcagcaggccgcg
tcccaacaggcgcacctggctcaacctctccatgtgcagctcccatccactctacctatc
aactctgctgctatgggctccaaactcagtcctgccgaggccgtctcccccaaggtattt
ggtgggtttcagctggtgcccgcaaccgatggacagttcgcgtttttgatccccaacccg
gccttcgcctccaccacaggccctgtcatccccctttacgcaaacgcaggagtgcctgtt
gcggtcaacgccagtccggtgcacggcagctcggcaccgactgcagcttctccagtccat
ggcatgacgtccttctccggggggtcccaggcggtcagcccggtcggagtcagcaccggt
tcggagggcaacgagcctgtgtggaggccttggtag
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integrated database retrieval system