Sander lucioperca (pikeperch): 116041139
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Entry
116041139 CDS
T07345
Symbol
prdm10
Name
(RefSeq) PR domain zinc finger protein 10 isoform X1
KO
K24643
PR domain zinc finger protein 10 [EC:2.1.1.-]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116041139 (prdm10)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
116041139 (prdm10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-C2H2_2
SET
zf-Di19
Zn_ribbon_PRDM4
Zf-C2H2_ZNF451
zf-met
zf-C2H2_7th_ZNF462
zf-C2H2_6
zf-C2H2_STOP2_C
DUF629
DUF5320
TerY_C
Motif
Other DBs
NCBI-GeneID:
116041139
NCBI-ProteinID:
XP_031142858
Ensembl:
ENSSLUG00000012158
LinkDB
All DBs
Position
5:complement(40307628..40333380)
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AA seq
1168 aa
AA seq
DB search
METKQEPSAVWSQTSNNDSGNGTQVHFEGGTVAQIVYSGDQAERGQQQVVYTADGNSYTS
VESAEHTLVYIHPADGTQTVFADQPQVAYIQQDGTTQQVTVLLPSGQNMNAANLHVLSNV
AEAPQAILETVSQEQLSVSNSLPSSMADMADPPSSPLGATDSTDDSDEDEDEDSEMDDWE
PRQPQSFNPHSLWCEECNIANPSVCLKHGPLHPIPNRPVMSKARASLPLVLYIDRFLGGV
FSKRRIPKRTQFGPVEGPLVPQSELQDHYIHLKLCMLDAEKDGEKSDDTWLDLSDEDSCN
WMMFVRPAQNHLEQNLVAYQYGSEIFYTSIKNIQPKQELKVWYAASYAEFVNQKIHDVTE
EEKKVLREQEKNWPCYECNRRFVSSEQLQQHLNMHDDKVNSVTRSRGRGRGRGRRRFGTG
RRPGRPPKFIRLDAPVDAGGDKTEMMELTEKALEERAEGAQNGLKVMESEAGAEAECQLL
PPAGEPEPESATPSSNTVLSVPLKEDPAHSSQSDSHLTSQDMRRAKRIRMDVQNAALQHL
FIRKSFRPFKCTHCGKAFRDKDKLEQHLRVHGRDAYAFSCHICSKSFMSDSALEDHLLVH
TENRSYSCLLCPETFERLDLLKDHVGVHAVEGCFTCPSCKKTFTDFIQVKKHIRCFHSEK
IFQCPDCEKAFCRPDKLRLHMLRHSDRKDFLCSTCGKQFKRKDKLREHMQRMHNPDREAK
KADRIHRSKSLKLKVPTTDFESFMFKCRVCMMGFRRRGMLVNHLSKRHPEMRIDDVPELT
LPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELPPSIRKLRPAAPGEPDPMLSTH
TQLTGTIATAPVCCPHCAKQYSSKTKMVQHIRKKHPEFAQLANTIQAPLTTAVISSAPAV
ISADGTTAEAVVTTDLLTQAMTELSQTLTTDYRTAQGDYQRIQYIPVSQAGGSLSQPQHI
QLQVVQVAAASSPHSQHPTVDVSQLHDPHGYSQHSIQVQHIQVNEASGTGQGATQPLSPS
SQQPSQELSPTQLTPVTLAQNHSLQSSSTQQQQQQQGAVQHAYIPGNWNYRGYSSEIQMM
ALPHAQYVIAEASTPVSGVNSNQVKTTHYVISEGQTELDTKQTGPQSTTQAHAEHLEQQP
ANQQATTQYIITTTTNGSGASEVHITKP
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaaacaggaaccatccgctgtgtggagtcagacatctaacaatgattcaggc
aacggcacacaggtgcattttgaaggcggcacagtggcccagatagtgtacagtggcgat
caggcggagcgaggacagcagcaggtggtttatacagcagacgggaactcctatacctct
gtagagtctgcagagcacacgctggtttacatccatcctgcagacggcactcagactgta
tttgctgatcagccccaagtggcttacattcagcaggatggtacaacgcaacaggtcacg
gttttgctgcccagtggacagaacatgaatgctgccaatctgcatgttctcagtaatgta
gcagaggctccccaggccatcctggagacagtttcccaggagcagctgtccgtgtccaat
tcgctcccctcctccatggctgacatggcggacccccccagcagtcccctcggggccaca
gactccacagacgattctgacgaagatgaggatgaagactctgagatggatgactgggaa
cctcgtcagcctcagtccttcaaccctcacagcctctggtgtgaggagtgtaatattgcc
aacccgtctgtgtgtctgaagcacggccctctgcaccccatccccaaccggcccgtcatg
tccaaggcccgggccagtctgcctctggtcctctacatcgatcgcttcctgggcggggtg
ttctccaagagacgcatcccaaagcgcacacagtttggtcctgtggagggacccctggtt
cctcagagtgaactgcaggaccactacattcatctcaaactgtgcatgctggatgcagag
aaagatggagagaagtctgatgacacgtggctggacctttccgacgaggacagctgtaac
tggatgatgtttgtgcgaccggctcagaaccacctggagcagaacctggtggcctaccag
tacggctcggagatattttacacgtccatcaagaacatccaacccaaacaagaactcaag
gtgtggtatgcggcatcatatgcagagtttgtcaatcagaagatccacgatgttacagaa
gaagagaaaaaagtgctccgggagcaggagaagaactggccttgttatgagtgtaaccgc
cgctttgtgagctctgaacaactgcagcaacatctcaacatgcacgatgacaaagtaaac
tctgttaccagatccagaggccggggccgaggcagaggcaggaggagatttgggacagga
agaagaccggggcggccccctaaatttatacgcttggatgcacctgtagacgccggtggg
gacaagacagagatgatggaactgacagagaaggcgctggaggagcgagcagagggagct
cagaacgggctgaaggtgatggagtcggaggccggggccgaggccgagtgccagcttcta
cctcccgcaggagaaccagagccagagtcggccaccccgtcctccaacacggtcctgtca
gtcccactaaaggaggaccctgcacacagcagccaatcagacagccacctcacatctcag
gacatgcggcgcgccaagaggatccggatggatgtgcagaatgcagcgctgcagcacctt
ttcatcaggaagagcttccgtccttttaaatgcacccactgcggcaaggccttccgggac
aaagacaagctggagcagcacctgcgggtccacggccgcgacgcctacgccttttcctgc
cacatttgcagcaagagcttcatgagtgactcggccctggaggaccacctactggtgcac
acggagaaccgctcctactcttgtctcttgtgcccagaaacctttgaaaggctggacctg
ctcaaagaccacgtaggggtgcatgctgtggagggctgcttcacctgtccttcctgcaag
aagacatttactgacttcatccaggtaaagaagcacatacgctgcttccattcagagaag
atctttcagtgcccagactgtgaaaaggccttctgccggccagacaagctgcgtttgcac
atgttgcgccactctgaccgcaaggacttcctgtgctcaacatgtggcaaacaattcaag
aggaaggataagctgcgggagcacatgcaacgcatgcacaatcccgacagagaggccaag
aaggctgaccgaatccaccgctccaaatccctgaagctgaaggtgcccaccaccgacttc
gagagcttcatgttcaaatgcagagtgtgcatgatggggttcaggcgcagaggaatgctg
gtcaatcatttgtccaagcgccacccagagatgcgtattgatgacgtgcctgagctcacg
ctgccaattatcaagcccaacagggactacttctgccagtactgtgacaaggtgtacaag
agtgccagtaagaggaaagcacacatactgaagaaccaccctggggcagagttgcctccc
agcatccgtaagttgcgtccggctgctcctggtgagccagaccccatgttgagcacgcac
acacagttgactggcaccatcgccactgcacccgtctgttgcccacactgtgccaaacag
tacagcagcaagactaagatggttcagcacatcaggaagaagcatccagagtttgcccaa
ctggccaacaccatccaggcccctctgacgacagctgtgatcagcagcgctcctgcagtc
atcagtgcagacggcactacagccgaggctgtcgtgaccacagatttgctgacccaggcc
atgacggagctttctcaaacactgaccacagactaccgcacagcgcagggagactaccag
aggatccagtacatccccgtgtcccaggcgggaggcagcctgtcccagccgcaacacatc
cagctgcaggtggtgcaggtggctgcggcttcctccccacattcccagcacccgacagta
gacgtgagccagctgcatgaccctcatggctacagccagcactccatccaggtccaacac
atccaggtcaatgaggcctcaggcactggacagggtgccactcagcctctaagcccctcc
tcccagcagcccagtcaggagctgagccccacccagctgacccccgtgacattagctcag
aaccacagcctgcagagcagcagcacccagcagcagcagcagcagcagggggcggtgcag
cacgcatacatacccgggaactggaactaccgcggctactcgtctgagatccagatgatg
gctctacctcacgcgcagtatgtgatcgctgaggccagcacacctgtatctggagtcaac
agcaaccaggtgaaaacgacacactacgtaatctccgagggtcagactgagctggatacc
aagcagaccggtccccagagcaccacccaggcccatgctgaacacctggagcagcaaccg
gccaatcagcaagccaccacgcagtacatcatcaccacaaccaccaacggcagcggcgct
agtgaagttcacatcacaaaaccctga
DBGET
integrated database retrieval system
