Sander lucioperca (pikeperch): 116041154
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Entry
116041154 CDS
T07345
Name
(RefSeq) cadherin-23-like
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04371
Apelin signaling pathway
sluc04514
Cell adhesion molecules
sluc04520
Adherens junction
sluc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
116041154
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116041154
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
116041154
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116041154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sluc03036
]
116041154
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sluc04515
]
116041154
04090 CD molecules [BR:
sluc04090
]
116041154
Chromosome and associated proteins [BR:
sluc03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116041154
Cell adhesion molecules [BR:
sluc04515
]
Cadherins
Major cadherins
116041154
CD molecules [BR:
sluc04090
]
Proteins
116041154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
116041154
NCBI-ProteinID:
XP_035857333
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Position
5:complement(41460399..41568315)
Genome browser
AA seq
1202 aa
AA seq
DB search
MGTTGLAVVGILLAILQVSAFVTTEEPTLNVEHYKGEHKGQNHQHQHTEVDCANDVESAA
DQQVPILEFPKSGEGLRMRKREWVIPDLLVVENDRGPYPLKLSQVRSNADKVNKIFYSIT
GPGADQPPVGLFTIDRITGTLYLTQQLDRERKDSYMFQAHAVAEGSANAEAPMDLIVKVI
DQNDNRPTFAQDIFLGKVPEASPRGFEVIKVVATDIDQPNTDHSDIRYRLISQEPTLPSD
FLFVINPITGVIRVNASGLDREKYPMYTLVVQAADMVGDGLTGEAKVILTVTDSNDNAPA
STQPSSATDQQVPILEFPKSGEGLRRKKREWVIPDLTVVENDRGPYPLKVSQIRSNADKV
KKIFYSITGPGADQPPVGLFTMDRNTGILYISQPLDREEQDSYPFQAHAVAEGSGNAEAS
MDITVKVIDQNDNRPTFNRSTFLGEVAEASPTGFEVIKVVATDIDQPNTDNSDIRYRLIS
QEPTLPSDFMFVINPVTGVIRVNASGLDREKYPMYTLVVQAADMVGDGLAGQAKVILTVT
DSNDNAPASTQPSSATDQQVPILEVPKSGEGLRRKKREWIIPDLNVVENDRGPYPLKVAQ
IRSAAHNVNKIFYSITGPGADQPPVGLFTMDRNTGILYLTQPLDREEQDSYMFQAHAVAE
GAGNAEAPMNIIVKVIDQNDNKPTFNQSTFLGEVAEASPTGFEVIKVVATDIDQPNTDNS
DIRYSLISQEPTLPSDFMFVINPVTGVIRFNASGLDREKYPMYTLVVQAADMVGDGLAGQ
AKVILTVTDSNDNAPASTQPSSATDQQVPILEVPKSGEGLRRKKREWIIPDLNVVENDRG
PYPLKVAQIRSAAHSVNKIFYSITGPGADQPPVGLFTMDRNTGILYLTQPLDREEQDSYM
FQAHAVAEGAGNAEAPMDIIVKVIDQNDNRPTFNQSTFLGEVAEASPRGFEVIKVVATDI
DQPNTDNSDIRYSLISQEPTLPSDFMFVINPITGVIRVNAGGLEKEKYPKYTLVVKAADM
LGEGLTGEAKVILTVTDSNDNAPAFTQPSYTAAVDENKVNAQILTMSVTDGDEPHSPAWN
ARFSIVGGDPEGLFTIETGSNNHEGIISTAKGLDFERSSTHALLVAVENEIPFAVPLPTA
TATVVVTVQDVNEAPVLDPVEKHVVKREALAVDSDVVRYTASEPDTGRTQKVINGHRPEF
NL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggggaccactgggctcgcagttgtgggcattttactcgccattttacaggtctctgcg
tttgtgactactgaggagccaacattaaatgttgagcattacaagggagagcataaaggc
cagaaccatcaacaccaacatactgaagtggactgtgctaacgacgtagagagtgcagct
gatcaacaggtgcccattctggaatttcccaagtcgggtgaggggctgaggatgaggaag
agagaatgggttattcctgacctccttgtcgttgagaatgaccgaggaccctacccccta
aaattatctcaagtccgttctaatgccgataaagtgaataagatcttctacagcatcact
ggtccaggagctgatcagcctcctgttggccttttcaccatagacagaatcactggtacg
ctgtatctcacacaacaactggacagagagaggaaagacagctacatgtttcaagcacat
gctgttgcagaaggttcagcaaatgctgaggcccctatggatcttatagtgaaagtaatt
gaccagaacgacaacagacctactttcgctcaagacatctttttgggaaaagttcctgag
gcttcaccaagaggttttgaggtgattaaggttgtggccacagacattgaccagccaaat
actgaccactcagatatccgctaccgtcttatcagccaggagccaacgttgcccagtgac
ttcctgtttgtcatcaacccaatcacaggagtcatcagggtcaatgccagtggactagac
agagagaaataccccatgtatactctggtggtacaagcagcagacatggtgggagatgga
ttgactggagaagcgaaagtaatccttactgtcacagatagcaacgacaacgctccggcc
tctactcagccgtcaagtgcaactgatcaacaggtgcccattctggaatttcccaagtcg
ggtgaggggctgaggaggaagaagagagaatgggttattcctgaccttactgtcgttgag
aatgaccgaggaccctaccccctaaaagtatctcaaatccgttctaatgccgataaagtg
aagaagatcttctacagcatcactggtccaggagctgatcagcctcctgttggccttttc
accatggacagaaacactggtattctgtatatctcacaaccactggacagagaggagcaa
gacagctacccgtttcaagcacatgctgttgcagaaggttcaggaaatgctgaggcctct
atggatattacagtgaaagtaattgaccagaacgacaacagacctactttcaatcgatcc
acctttctgggagaagttgctgaggcctcaccaacaggttttgaggtgattaaggttgtg
gccacagatattgaccagccaaatactgacaactcagatatccgctaccgtcttatcagc
caggagccaacgttgcccagtgacttcatgtttgtcatcaacccagtcacaggagtcatc
agggtcaatgccagtggactagacagagagaaataccccatgtatactctggtggtacaa
gcagcagacatggtgggagatggattggctggacaagcgaaagtaatccttactgtcaca
gatagcaacgacaatgctccggcctctactcagccgtcgagtgcaactgatcaacaggtg
cccattctggaagttcccaagtcgggtgaggggctgaggaggaagaagagagaatggatt
attcctgacctcaatgtcgttgagaatgaccgaggaccctaccccctaaaagtagctcaa
atccgtagtgctgcacataatgtgaataagatcttctacagcatcactggtccaggagct
gatcagcctcctgttggccttttcaccatggacagaaacactggtattctgtatctcaca
caaccactggacagagaggagcaagacagctacatgtttcaagcacatgctgtagcagaa
ggtgcaggaaatgctgaggcccctatgaatattatagtgaaagtaattgaccagaacgac
aacaaacctactttcaatcaatccacctttctgggagaagttgctgaggcctcaccaaca
ggttttgaggtgattaaggttgtggccacagatattgaccagccaaatactgacaactca
gatatccgctacagtcttatcagccaggagccaacgttgcccagtgacttcatgtttgtc
atcaacccagttacaggagtcatcaggttcaatgccagtggactagacagagagaaatac
cccatgtatactctggtggtacaagcagcagacatggtgggagatggattggctggacaa
gcgaaagtaatccttactgtcacagatagcaacgacaatgctccggcctctactcagccg
tcgagtgcaactgatcaacaggtgcccattctggaagttcccaagtcgggtgaggggctg
aggaggaagaagagagaatggattattcctgacctcaatgtcgttgagaatgaccgagga
ccctaccccctaaaagtagctcaaatccgtagtgctgcacatagtgtgaataagatcttc
tacagcatcactggtccaggagctgatcagcctcctgttggccttttcaccatggacaga
aacactggtattctgtatctcacacaaccactggacagagaggagcaagacagctacatg
tttcaagcacatgctgtagcagaaggtgcaggaaatgctgaggcccctatggatattata
gtgaaagtaattgaccagaacgacaacagacctactttcaatcaatccacctttctggga
gaagttgctgaggcctcaccaagaggttttgaggtgattaaggttgtggccacagatatt
gaccagccaaatactgacaactcagatatccgctacagtcttatcagccaggagccaacg
ttgcccagtgacttcatgtttgtcatcaacccaatcacaggagtcatcagagtcaatgcc
ggtgggctagaaaaagagaaataccccaaatacactctggtggtaaaggcagcagacatg
ttgggagaaggattgactggagaagcaaaagtaatccttactgtcacagatagcaacgac
aatgctccggcctttactcagccgtcgtatacggcagcagttgatgaaaacaaagtcaac
gctcagatcttaacgatgtcagtaacagacggtgatgaaccacattctccagcctggaac
gccaggttcagtattgtcggtggtgatcctgaaggactttttaccatcgaaacaggaagt
aacaaccatgaaggaatcatttctactgccaagggtcttgactttgagaggagcagcacg
cacgctttgttggttgcagtggagaatgagattccttttgctgttccactgcccactgcc
accgccacagtggtggtgactgtgcaggatgtcaatgaagctccagtcttagatccagta
gagaagcatgtggtaaaacgggaggcccttgctgttgacagtgatgtggtgcggtacacc
gcttctgaaccagacactggacgcacacagaaagtcataaacggtcatcgtcctgaattt
aatctctga
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integrated database retrieval system