Sander lucioperca (pikeperch): 116041224
Help
Entry
116041224 CDS
T07345
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116041224 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sluc01007
]
116041224 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116041224 (yars1)
03029 Mitochondrial biogenesis [BR:
sluc03029
]
116041224 (yars1)
Enzymes [BR:
sluc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
116041224 (yars1)
Amino acid related enzymes [BR:
sluc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
116041224 (yars1)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116041224 (yars1)
Prokaryotic type
116041224 (yars1)
Mitochondrial biogenesis [BR:
sluc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116041224 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
116041224
NCBI-ProteinID:
XP_031142971
Ensembl:
ENSSLUG00000021875
LinkDB
All DBs
Position
16:complement(2015539..2023873)
Genome browser
AA seq
529 aa
AA seq
DB search
MADQLSPDEKFHLITRNLQEVLGEEKLKQILQERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTILFADLHAFLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKG
TDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVD
AQFGGVDQRKIFTLAEKYLPSLGYAKRSHLMNPMVPGLTGAKMSSSEEESKIDLLDSAGD
VKKKLKKAFCEPGNIQNNGVLSFVKHVVFPLRGEFCVKRDPKWGGDKIYTAFEELEKDFA
EELVHPGDLKASVEVALNQLLEPIRKKFESPELRKLSNTAYPNPSKTKGAAKGAKAGGGE
DDELDPSRVDIRVGKIISVEKHPDADSLYLEKIDVGEPQPRTVVSGLVAYVSQEDLQDRL
VLVLCNLKPQKMRGIESQAMLLCASIEGEPRRVEPLDPPEGSSPGERVFVEGYETGKPDD
KLNPKKKVWEKVQVDLKISGECVAQWKDKQLMTKLGQITCKTLKGGNIS
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagttaagtccggatgagaagttccacctcatcactaggaacctccaggag
gtacttggagaggagaagctgaagcagattcttcaggagagagagctgaaggtgtactgg
ggcacagcgaccactggcaaaccccacgtagcttactttgtccctatgtccaagatagca
gacttccttaaggctggatgtgaggtcactattctgtttgcagacttgcatgccttccta
gacaacatgaaggccccctgggagctgctggagctcagggtgaaatactacgaacaggtc
atcaaggccatgttggagagcattggcgtgcccctggacaaactcaagtttgtcaaagga
actgacttccagctcagcagagagtacactctggatgtgtaccgtctgtcctccatggtg
acggagcatgatgctaagaaggctggagctgaggtggtcaagcaggtggagcatcccctg
ctcagtggcctgctctaccctggactgcaggctctggatgaggagtacctcaaggtggac
gcccagtttggaggagttgaccagaggaagattttcactctggcagagaagtacttgcct
tcccttggctatgccaagcgctcccatctaatgaacccgatggtgccaggactgacgggg
gccaagatgagctcctcagaggaagagtcaaagattgatctgctggactctgccggagac
gtgaagaagaagctgaagaaggctttctgtgagccaggcaacatccagaacaacggagtc
ctctcctttgtcaaacatgtcgtcttccctctacgcggagagttctgcgtcaaaagagac
cccaagtggggtggagacaaaatctacaccgcgtttgaagagttggagaaggactttgct
gaggagctggtccatccaggagacctgaaggcctccgtggaagtagcactaaaccaactg
ctggagccaatcagaaagaagtttgagtcgcctgagctccgcaaactttccaacactgcc
taccccaacccctcaaagacgaaaggggctgctaagggcgccaaggcaggaggaggagag
gatgacgagctggacccctccagagtggacatcagggtgggcaagatcatcagtgtggag
aagcatccagatgctgattcactgtacctggagaagatcgatgtgggggagccgcagcca
agaacggtagtcagcggtctggtggcttatgtttcccaggaggacctacaggaccgactg
gtgttggtgctgtgcaatctgaaaccccagaagatgcgagggattgagtctcaagccatg
ctgctgtgtgcctctattgaaggggagcccaggagggtggagcctctggaccctccagag
gggtcgtcgccaggagaacgggtctttgtcgagggatatgaaacaggcaaaccagacgac
aaactcaacccaaagaagaaggtgtgggagaaagtacaggtcgacctgaagatatcgggc
gagtgtgtagctcagtggaaagacaagcagctgatgactaaactaggacagatcacatgt
aagacactcaaaggaggcaacatcagttag
DBGET
integrated database retrieval system
