Sander lucioperca (pikeperch): 116041243
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Entry
116041243 CDS
T07345
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
sluc
Sander lucioperca (pikeperch)
Pathway
sluc04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116041243 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sluc04131
]
116041243 (vps35)
Membrane trafficking [BR:
sluc04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116041243 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
CENP-O
FerA
Motif
Other DBs
NCBI-GeneID:
116041243
NCBI-ProteinID:
XP_035855752
Ensembl:
ENSSLUG00000015055
LinkDB
All DBs
Position
3:31953628..31977307
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AA seq
534 aa
AA seq
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MECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNIIIALIDRLALFAHREDGPGIPSEI
KLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAIKCYPDRVDYVDKVLESTVEIFNK
LNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLQLKHFPPLFEYFDYESRKSMSCYVLS
NTLDYNTTILEQEQVDAILSLVSTLIQDQPDQPADDPDPEDFAEEQSLVGRFIHLLHSED
PDQQYLILNTARKHFGAGGNLRIRYTLPPLVFAAYQLAFRYKENSSLDDKWEKKCQKIFS
FAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSK
AQLAAITLIIGTFERMRCFSEENHEPLRTQCALAASKLLKKPDQCRAVSICAHLFWSGRS
TEKNGEEIRDGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYICFYERENDAVTVQV
LNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLRLQRESPESEGPAYEGLVL
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcatcattcaggttttcccagatgagttccaccttcagaccctgaaccctttc
ctacgttcctgtgctgagctccatcaacatgtcaatgtcaagaacatcatcattgccctc
attgacagacttgctctgtttgctcatcgagaagatggccctggtattccatctgagatc
aaactgtttgacatcttctctcagcaagtggctactgttattcaatctcgccaggacatg
ccatcagaggacgtagtctctttgcaggtctctctcatcaacttggccattaaatgctac
cctgaccgtgtggactacgtagataaggtcctggagagcactgtggagatattcaacaag
ctcaacttggaacacatagcgaccagcagcgcagtgtcaaaggaactaacccgactgttg
aagatcccagtggatacctacaacaacatcctgaccgtgctgcagctcaagcacttccca
ccactcttcgagtactttgactacgagtcacgcaagagcatgagttgctatgtgctgagc
aacacactggactacaacaccaccattctggaacaggaacaggtggacgccatcttgagc
ttggtatccacactgatacaggaccagccagaccaaccagctgatgaccctgaccctgag
gactttgctgaggagcagagccttgtgggtcgtttcatccatctgctccactccgaagat
ccggatcaacagtatcttattctgaacacagcccggaaacactttggtgcgggtgggaac
ctaaggattcgctacacactccctcctctggtgttcgctgcctaccagctggccttcaga
tacaaggagaactcctcattggatgacaagtgggaaaagaagtgtcagaagatcttttcc
ttcgcccaccagaccatcagtgcacttatcaaggcagagcttgctgagctgcctcttcga
ctcttcctgcagggggcgctggctgcaggcgagattggctttgaaaaccacgagactgtt
gcttatgagttcatgtcacaggccttctctctgtacgaggatgagatcagtgactctaaa
gcccagttggcagccatcacactgatcattggtacctttgagcgaatgcgatgtttcagc
gaggaaaaccatgagccgctgaggactcagtgtgcgctggctgcctccaagctgctgaag
aagcctgaccagtgccgagccgtcagtatctgcgcccatctcttttggtcaggtcgcagc
actgaaaaaaatggtgaagagatccgtgatggtaagcgggtgatggagtgtctaaagaaa
gccctgaagattgccaaccagtgtatggacccatcgctgcaagtccagcttttcattgaa
atcctcaacagatacatctgcttctatgagagagaaaatgatgcggtgactgtccaggta
ttaaaccagcttatccagaagatcagagaagaccttcccaacctggaggcgagtgaggaa
acggagcagatcaacaaacacttccacaacacactggagcatcttcgcctgcagagagaa
tcccccgagtctgagggccccgcctatgagggcctggttctttaa
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