Sander lucioperca (pikeperch): 116041322
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Entry
116041322 CDS
T07345
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sluc03000
]
116041322 (irx1b)
Transcription factors [BR:
sluc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116041322 (irx1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
116041322
NCBI-ProteinID:
XP_035849214
Ensembl:
ENSSLUG00000023979
LinkDB
All DBs
Position
16:2913306..2917384
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AA seq
464 aa
AA seq
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MSFPQLGYPQFLSASHEVYGGERPASAREGGTEGGVSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGATDLALITQMSSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDEHGKNGSDDEDEEEEIDLETVDIERPEEQRAGEQGSGKGEGE
AEGEAGLADREQASEPKSSESSRTLSVDGLRGVEAAISLNRSPVVKLAVDLSPNRQECQR
PPQSKPKIWSLAETATAPDSSHKPSPAAHAHHAALASAGHPALLPGHGIYTCQIGKLHNW
ANAAFLNANSLLNMRSLLGGAPAGHLPLHGAVPVVRHDARQAAAGPGTSGTEDDSDLESS
GSFSPKRDDEESDHRPDSLKSPFQLISDRPHHGTAPQRVLTTTL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcagtgcctcacatgaggtgtacggg
ggcgagcgaccggcctctgcccgggaaggaggcactgaaggcggcgtgagctcgtccgct
accgccgcggctgtcggctccatgcttgggatgtacgggagcccgtgggcggctcacaac
tacagtgccttcctgccgtacagcggagccacagacctcgccctcataacccagatgagc
tcccaatatgagctgaaggacagcccggggtcccaccctgcctctctacctgtccacgcc
gcccaaggcttctacccatacggccagtacccgtacggggacccgtccagggccaagacg
gccacccgggagaccaccagcaccctgaaggcctggctgcaggagcaccagaagaacccc
taccccaccaaaggagagaagataatgcttgctatcatcacccgaatgacactcacacag
gtgtcgacgtggttcgcgaacgcccgcagacgcctgaagaaggagaacaaggtaacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgagcac
ggcaagaacggcagcgacgacgaagacgaagaggaggaaattgatttggaaactgtcgat
atcgagagacccgaggaacagcgagcgggggagcagggctccgggaagggagagggagag
gcagagggagaggcaggcctggccgacagagagcaagcctcggagccgaagagctcagag
agcagcaggacactttctgtggacggcctgagaggagtggaggcggctatttctctcaat
agatcgcctgttgtcaaactcgcagtggatctttctccaaacagacaggagtgccagaga
ccaccgcagagcaaacccaaaatctggtccctggctgagaccgccacggccccggacagc
tctcacaaaccttcccccgcggcccatgcgcaccacgcggctttggcctccgccggccac
ccggccttactcccgggtcatgggatttatacatgccagattggcaagctgcacaactgg
gccaacgcggcttttctgaatgccaactctcttttgaacatgaggtcgctcctcggcggg
gcgccggccggacacctgcctctccacggcgcggtgccggttgtgcgtcatgacgcacgg
caggcggcggctggccccgggacttcgggaacggaggatgacagtgatctagagtcgtca
ggaagcttcagtccaaaaagagatgacgaagagagcgaccacaggcctgattccctcaag
tccccattccagctgatcagtgacagacctcaccatgggacagcaccacagcgagttctg
acaacgacattatga
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