KEGG   Sander lucioperca (pikeperch): 116041366
Entry
116041366         CDS       T07345                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
sluc  Sander lucioperca (pikeperch)
Pathway
sluc03082  ATP-dependent chromatin remodeling
sluc03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sluc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116041366
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    116041366
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sluc01009]
    116041366
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sluc03021]
    116041366
   03036 Chromosome and associated proteins [BR:sluc03036]
    116041366
Protein phosphatases and associated proteins [BR:sluc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116041366
Transcription machinery [BR:sluc03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     116041366
    SWI/SNF complex
     116041366
Chromosome and associated proteins [BR:sluc03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    116041366
   PBAF complex
    116041366
   SWI/SNF complex
    116041366
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 116041366
NCBI-ProteinID: XP_031143107
Ensembl: ENSSLUG00000006060
LinkDB
Position
14:263184..321508
AA seq 368 aa
MQLALSKTFGQKPVKFQLEPDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcaactggctcttagtaaaacctttggccagaaaccagttaaatttcaattagaacca
gatggggacttttacatggttggatctgaggttggaaactatctgcgcatgttcagaggc
tctctgtataaaagatatccatctttatggaggaggctagcctcggtggaggagaggaag
aaaatcgtagcatcatcacatgctactagtgttactctgctgaaggcatcagaatgtgaa
gagatcttcgagggtaatgatgagaaatacaaggcggtgtccatcagcacagagccccca
gcttacctcagggagcagaaagccaagaggagcagtcagtgggtccccacgctgcccaac
agctctcaccatttagatgctgtgccttgctccaccaccatcaaccgtaaccgaatgggc
cgtgacaagaagaggaccttcccactgtgctttgatgaccacgaccctgcagtgatccat
gagaatgcagcccaggtagaagcactggttcccattcgcctagacatggaaatagacgga
cagaaactgcgagatgcctttacgtggaacatgaatgaaaaactgatgaccccagagatg
tttgcagagattttatgtgatgacctggacctgaatcctctggcctttgtccccgccatt
gcctcagccattcgtcagcagattgagtcctaccccactgacagtatactggaagagcag
gcagaccagagagtcatcatcaagctgaatatccacgtggggaacatttctttggtggac
caatttgagtgggacatgtcagagagagagaattcaccggagtcatttgcactgaagctg
tgctctgagctgggtctgggtggagagtttgtaacgactatcgcctacagcattcgtggt
cagctcagctggcaccagaggacctatgccttcagtgagaatccactcccgacagtagag
attgccatccgcaacacaggtgatgcagatcagtggtgccccctgctggagaccctcaca
gatgctgaaatggaaaagaagatccgagaccaagacaggaacacaaggcgtatgagacga
ctggccaacactgctccttcctggtag

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